RNA–Protein interactions for RNA: ENST00000493015.1

RRAGC-203, Transcript of Ras related GTP binding C, humanhuman

TSL 3

Gene RRAGC, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRAGC-203ENST00000493015 AEBP2Q6ZN18 517 aaPredicted RBP28.45■■■□□ 2.14
RRAGC-203ENST00000493015 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
RRAGC-203ENST00000493015 SENP3Q9H4L4 574 aaPredicted RBP24.39■■□□□ 1.49
RRAGC-203ENST00000493015 PHF23Q9BUL5 403 aaPredicted RBP23.96■■□□□ 1.43
RRAGC-203ENST00000493015 FOXD1Q16676 465 aa22.66■■□□□ 1.22
RRAGC-203ENST00000493015 PLPPR3Q6T4P5 718 aa21.46■■□□□ 1.03
RRAGC-203ENST00000493015 MSH5O43196 834 aa21.36■■□□□ 1.01
RRAGC-203ENST00000493015 PIAS4Q8N2W9 510 aaPredicted RBP21.16■□□□□ 0.98
RRAGC-203ENST00000493015 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
RRAGC-203ENST00000493015 PPP6R1Q9UPN7 881 aa21.03■□□□□ 0.96
RRAGC-203ENST00000493015 ADRA2BP18089 450 aa20.94■□□□□ 0.94
RRAGC-203ENST00000493015 DMRT2Q9Y5R5 561 aa19.3■□□□□ 0.68
RRAGC-203ENST00000493015 SCAF1Q9H7N4 1312 aaKnown RBP19.28■□□□□ 0.68
RRAGC-203ENST00000493015 MAPK8IP2Q13387 824 aaPredicted RBP19.25■□□□□ 0.67
RRAGC-203ENST00000493015 PPP4R3CPQ6ZMV5 832 aa18.74■□□□□ 0.59
RRAGC-203ENST00000493015 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
RRAGC-203ENST00000493015 CNKSR2Q8WXI2 1034 aa18.47■□□□□ 0.55
RRAGC-203ENST00000493015 DCAF8L1A6NGE4 600 aa18.4■□□□□ 0.54
RRAGC-203ENST00000493015 RNF216Q9NWF9 866 aaPredicted RBP18.36■□□□□ 0.53
RRAGC-203ENST00000493015 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
RRAGC-203ENST00000493015 RNF39Q9H2S5 420 aa18.18■□□□□ 0.5
RRAGC-203ENST00000493015 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
RRAGC-203ENST00000493015 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
RRAGC-203ENST00000493015 C1QBPQ07021 282 aaKnown RBP17.94■□□□□ 0.46
RRAGC-203ENST00000493015 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
RRAGC-203ENST00000493015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.41
RRAGC-203ENST00000493015 U3KPZ7 1027 aaPredicted RBP17.23■□□□□ 0.35
RRAGC-203ENST00000493015 KCNA4P22459 653 aa17.21■□□□□ 0.35
RRAGC-203ENST00000493015 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
RRAGC-203ENST00000493015 CAPN15O75808 1086 aa16.97■□□□□ 0.31
RRAGC-203ENST00000493015 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
RRAGC-203ENST00000493015 DSG3P32926 999 aa16.95■□□□□ 0.3
RRAGC-203ENST00000493015 APLP2Q06481 763 aa16.84■□□□□ 0.29
RRAGC-203ENST00000493015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
RRAGC-203ENST00000493015 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
RRAGC-203ENST00000493015 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
RRAGC-203ENST00000493015 SAMD1Q6SPF0 538 aaPredicted RBP16.65■□□□□ 0.26
RRAGC-203ENST00000493015 TRHP20396 242 aaPredicted RBP16.64■□□□□ 0.25
RRAGC-203ENST00000493015 ABCB7O75027 752 aa16.54■□□□□ 0.24
RRAGC-203ENST00000493015 POTEHQ6S545 545 aa16.46■□□□□ 0.23
RRAGC-203ENST00000493015 MYCNP04198 464 aaPredicted RBP16.44■□□□□ 0.22
RRAGC-203ENST00000493015 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
RRAGC-203ENST00000493015 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
RRAGC-203ENST00000493015 POLA2Q14181 598 aa16.18■□□□□ 0.18
RRAGC-203ENST00000493015 FOXD4L1Q9NU39 408 aa16.18■□□□□ 0.18
RRAGC-203ENST00000493015 ZBTB12Q9Y330 459 aaPredicted RBP15.97■□□□□ 0.15
RRAGC-203ENST00000493015 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
RRAGC-203ENST00000493015 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
RRAGC-203ENST00000493015 ZBTB22O15209 634 aa15.81■□□□□ 0.12
RRAGC-203ENST00000493015 AKT1S1Q96B36 256 aa15.81■□□□□ 0.12
RRAGC-203ENST00000493015 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
RRAGC-203ENST00000493015 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
RRAGC-203ENST00000493015 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
RRAGC-203ENST00000493015 PIP4P2Q8N4L2 257 aa15.46■□□□□ 0.07
RRAGC-203ENST00000493015 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
RRAGC-203ENST00000493015 FBLN2P98095 1184 aa15.45■□□□□ 0.06
RRAGC-203ENST00000493015 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
RRAGC-203ENST00000493015 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
RRAGC-203ENST00000493015 SPDYE2Q495Y8 402 aa15.43■□□□□ 0.06
RRAGC-203ENST00000493015 FXR2P51116 673 aaKnown RBP eCLIP15.38■□□□□ 0.05
RRAGC-203ENST00000493015 SP7Q8TDD2 431 aaPredicted RBP15.38■□□□□ 0.05
RRAGC-203ENST00000493015 MKRN4PQ13434 485 aaPredicted RBP15.26■□□□□ 0.03
RRAGC-203ENST00000493015 SSUH2Q9Y2M2 353 aa15.2■□□□□ 0.02
RRAGC-203ENST00000493015 HAX1O00165 279 aa15.19■□□□□ 0.02
RRAGC-203ENST00000493015 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
RRAGC-203ENST00000493015 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
RRAGC-203ENST00000493015 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
RRAGC-203ENST00000493015 PRKAR2AP13861 404 aaKnown RBP15.04■□□□□ -0
RRAGC-203ENST00000493015 EVX2Q03828 476 aa14.95□□□□□ -0.02
RRAGC-203ENST00000493015 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
RRAGC-203ENST00000493015 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
RRAGC-203ENST00000493015 C19orf67A6NJJ6 358 aa14.89□□□□□ -0.03
RRAGC-203ENST00000493015 PRR29P0C7W0 189 aa14.84□□□□□ -0.03
RRAGC-203ENST00000493015 EHMT2Q96KQ7 1210 aa14.81□□□□□ -0.04
RRAGC-203ENST00000493015 CHADLQ6NUI6 762 aa14.78□□□□□ -0.04
RRAGC-203ENST00000493015 GABBR2O75899 941 aa14.67□□□□□ -0.06
RRAGC-203ENST00000493015 FARP1Q9Y4F1 1045 aaPredicted RBP14.62□□□□□ -0.07
RRAGC-203ENST00000493015 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
RRAGC-203ENST00000493015 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
RRAGC-203ENST00000493015 CLCN6P51797 869 aa14.52□□□□□ -0.09
RRAGC-203ENST00000493015 SPDYE4A6NLX3 237 aa14.48□□□□□ -0.09
RRAGC-203ENST00000493015 CREBZFQ9NS37 354 aa14.44□□□□□ -0.1
RRAGC-203ENST00000493015 LHX8Q68G74 356 aa14.39□□□□□ -0.11
RRAGC-203ENST00000493015 ZNF579Q8NAF0 562 aaKnown RBP14.39□□□□□ -0.11
RRAGC-203ENST00000493015 POTEIP0CG38 1075 aa14.34□□□□□ -0.11
RRAGC-203ENST00000493015 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
RRAGC-203ENST00000493015 DCBLD2Q96PD2 775 aa14.25□□□□□ -0.13
RRAGC-203ENST00000493015 PAK3O75914 559 aaPredicted RBP14.22□□□□□ -0.13
RRAGC-203ENST00000493015 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
RRAGC-203ENST00000493015 MNX1P50219 401 aaPredicted RBP14.18□□□□□ -0.14
RRAGC-203ENST00000493015 PROM2Q8N271 834 aa14.18□□□□□ -0.14
RRAGC-203ENST00000493015 GALR2O43603 387 aaPredicted RBP14.15□□□□□ -0.14
RRAGC-203ENST00000493015 PHF12Q96QT6 1004 aa14.09□□□□□ -0.15
RRAGC-203ENST00000493015 MS4A3Q96HJ5 214 aa13.93□□□□□ -0.18
RRAGC-203ENST00000493015 ASTLQ6HA08 431 aaPredicted RBP13.9□□□□□ -0.18
RRAGC-203ENST00000493015 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
RRAGC-203ENST00000493015 CCDC61Q9Y6R9 512 aa13.88□□□□□ -0.19
RRAGC-203ENST00000493015 PELP1Q8IZL8 1130 aaKnown RBP13.86□□□□□ -0.19
RRAGC-203ENST00000493015 OTUD5Q96G74 571 aa13.86□□□□□ -0.19
RRAGC-203ENST00000493015 TSPYL2Q9H2G4 693 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms