RNA–Protein interactions for RNA: ENST00000492822.1

NDUFA4-206, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 5

Gene NDUFA4, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-206ENST00000492822 AEBP2Q6ZN18 517 aaPredicted RBP21.4■■□□□ 1.02
NDUFA4-206ENST00000492822 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
NDUFA4-206ENST00000492822 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
NDUFA4-206ENST00000492822 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
NDUFA4-206ENST00000492822 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
NDUFA4-206ENST00000492822 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
NDUFA4-206ENST00000492822 FOXD1Q16676 465 aa17.28■□□□□ 0.36
NDUFA4-206ENST00000492822 MSH5O43196 834 aa16.48■□□□□ 0.23
NDUFA4-206ENST00000492822 ADRA2BP18089 450 aa16.42■□□□□ 0.22
NDUFA4-206ENST00000492822 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
NDUFA4-206ENST00000492822 KCNA4P22459 653 aa15.97■□□□□ 0.15
NDUFA4-206ENST00000492822 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
NDUFA4-206ENST00000492822 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
NDUFA4-206ENST00000492822 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
NDUFA4-206ENST00000492822 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
NDUFA4-206ENST00000492822 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
NDUFA4-206ENST00000492822 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
NDUFA4-206ENST00000492822 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
NDUFA4-206ENST00000492822 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
NDUFA4-206ENST00000492822 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
NDUFA4-206ENST00000492822 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
NDUFA4-206ENST00000492822 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
NDUFA4-206ENST00000492822 ZBTB22O15209 634 aa14.73□□□□□ -0.05
NDUFA4-206ENST00000492822 NISCHQ9Y2I1 1504 aa14.67□□□□□ -0.06
NDUFA4-206ENST00000492822 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
NDUFA4-206ENST00000492822 RNF216Q9NWF9 866 aaPredicted RBP14.6□□□□□ -0.07
NDUFA4-206ENST00000492822 FOXD4L1Q9NU39 408 aa14.54□□□□□ -0.08
NDUFA4-206ENST00000492822 DMRT2Q9Y5R5 561 aa14.42□□□□□ -0.1
NDUFA4-206ENST00000492822 HOXD11P31277 338 aaPredicted RBP14.39□□□□□ -0.11
NDUFA4-206ENST00000492822 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
NDUFA4-206ENST00000492822 MYCNP04198 464 aaPredicted RBP14.03□□□□□ -0.16
NDUFA4-206ENST00000492822 ATXN8OSP0DMR3 200 aa14.01□□□□□ -0.17
NDUFA4-206ENST00000492822 RNF39Q9H2S5 420 aa14.01□□□□□ -0.17
NDUFA4-206ENST00000492822 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
NDUFA4-206ENST00000492822 POTEHQ6S545 545 aa13.84□□□□□ -0.19
NDUFA4-206ENST00000492822 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
NDUFA4-206ENST00000492822 FKBP8Q14318 412 aa13.63□□□□□ -0.23
NDUFA4-206ENST00000492822 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
NDUFA4-206ENST00000492822 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.6□□□□□ -0.23
NDUFA4-206ENST00000492822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.59□□□□□ -0.23
NDUFA4-206ENST00000492822 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
NDUFA4-206ENST00000492822 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
NDUFA4-206ENST00000492822 RTN4Q9NQC3 1192 aaKnown RBP13.57□□□□□ -0.24
NDUFA4-206ENST00000492822 ATF5Q9Y2D1 282 aaPredicted RBP13.53□□□□□ -0.24
NDUFA4-206ENST00000492822 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
NDUFA4-206ENST00000492822 SLC24A1O60721 1099 aa13.34□□□□□ -0.27
NDUFA4-206ENST00000492822 APLP2Q06481 763 aa13.31□□□□□ -0.28
NDUFA4-206ENST00000492822 ZNF219Q9P2Y4 722 aaPredicted RBP13.26□□□□□ -0.29
NDUFA4-206ENST00000492822 CCDC180Q9P1Z9 1646 aa13.1□□□□□ -0.31
NDUFA4-206ENST00000492822 MKRN4PQ13434 485 aaPredicted RBP13.02□□□□□ -0.33
NDUFA4-206ENST00000492822 PROM2Q8N271 834 aa13.02□□□□□ -0.33
NDUFA4-206ENST00000492822 SPDYE4A6NLX3 237 aa13.01□□□□□ -0.33
NDUFA4-206ENST00000492822 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
NDUFA4-206ENST00000492822 ABCC9O60706 1549 aa13.01□□□□□ -0.33
NDUFA4-206ENST00000492822 FBLN2P98095 1184 aa12.95□□□□□ -0.34
NDUFA4-206ENST00000492822 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
NDUFA4-206ENST00000492822 TRHP20396 242 aaPredicted RBP12.88□□□□□ -0.35
NDUFA4-206ENST00000492822 POLA2Q14181 598 aa12.84□□□□□ -0.35
NDUFA4-206ENST00000492822 VASPP50552 380 aaPredicted RBP12.83□□□□□ -0.36
NDUFA4-206ENST00000492822 CAPN15O75808 1086 aa12.8□□□□□ -0.36
NDUFA4-206ENST00000492822 DSG3P32926 999 aa12.79□□□□□ -0.36
NDUFA4-206ENST00000492822 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
NDUFA4-206ENST00000492822 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
NDUFA4-206ENST00000492822 ABCB7O75027 752 aa12.61□□□□□ -0.39
NDUFA4-206ENST00000492822 PLCB2Q00722 1185 aa12.55□□□□□ -0.4
NDUFA4-206ENST00000492822 PKD2Q13563 968 aa12.51□□□□□ -0.41
NDUFA4-206ENST00000492822 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
NDUFA4-206ENST00000492822 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
NDUFA4-206ENST00000492822 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
NDUFA4-206ENST00000492822 SSUH2Q9Y2M2 353 aa12.48□□□□□ -0.41
NDUFA4-206ENST00000492822 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
NDUFA4-206ENST00000492822 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
NDUFA4-206ENST00000492822 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
NDUFA4-206ENST00000492822 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
NDUFA4-206ENST00000492822 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
NDUFA4-206ENST00000492822 RB1CC1Q8TDY2 1594 aa12.39□□□□□ -0.43
NDUFA4-206ENST00000492822 DCAF8L2P0C7V8 631 aa12.38□□□□□ -0.43
NDUFA4-206ENST00000492822 CHRDL2Q6WN34 429 aa12.36□□□□□ -0.43
NDUFA4-206ENST00000492822 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
NDUFA4-206ENST00000492822 NACADO15069 1562 aa12.33□□□□□ -0.44
NDUFA4-206ENST00000492822 PABPN1Q86U42 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
NDUFA4-206ENST00000492822 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
NDUFA4-206ENST00000492822 ECM2O94769 699 aaPredicted RBP12.28□□□□□ -0.44
NDUFA4-206ENST00000492822 PLCD3Q8N3E9 789 aa12.28□□□□□ -0.44
NDUFA4-206ENST00000492822 BBXQ8WY36 941 aaPredicted RBP12.22□□□□□ -0.45
NDUFA4-206ENST00000492822 ZCCHC6Q5VYS8 1495 aaKnown RBP12.21□□□□□ -0.46
NDUFA4-206ENST00000492822 MIER1Q8N108 512 aa12.2□□□□□ -0.46
NDUFA4-206ENST00000492822 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
NDUFA4-206ENST00000492822 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
NDUFA4-206ENST00000492822 MYO15BQ96JP2 1530 aa12.19□□□□□ -0.46
NDUFA4-206ENST00000492822 UNC13AQ9UPW8 1703 aa12.18□□□□□ -0.46
NDUFA4-206ENST00000492822 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.18□□□□□ -0.46
NDUFA4-206ENST00000492822 RGL2O15211 777 aa12.15□□□□□ -0.46
NDUFA4-206ENST00000492822 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
NDUFA4-206ENST00000492822 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
NDUFA4-206ENST00000492822 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
NDUFA4-206ENST00000492822 BCANQ96GW7 911 aa12.1□□□□□ -0.47
NDUFA4-206ENST00000492822 DCAF1Q9Y4B6 1507 aa12.1□□□□□ -0.47
NDUFA4-206ENST00000492822 BICRAQ9NZM4 1560 aa12.09□□□□□ -0.47
NDUFA4-206ENST00000492822 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms