RNA–Protein interactions for RNA: ENST00000491816.1

PARP1-208, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 416 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-208ENST00000491816 AEBP2Q6ZN18 517 aaPredicted RBP33.04■■■□□ 2.88
PARP1-208ENST00000491816 CHIC1Q5VXU3 224 aa31.25■■■□□ 2.59
PARP1-208ENST00000491816 SENP3Q9H4L4 574 aaPredicted RBP28.07■■■□□ 2.08
PARP1-208ENST00000491816 PHF23Q9BUL5 403 aaPredicted RBP27.79■■■□□ 2.04
PARP1-208ENST00000491816 FOXD1Q16676 465 aa26.26■■□□□ 1.79
PARP1-208ENST00000491816 PLPPR3Q6T4P5 718 aa24.92■■□□□ 1.58
PARP1-208ENST00000491816 PPP6R1Q9UPN7 881 aa24.58■■□□□ 1.53
PARP1-208ENST00000491816 PIAS4Q8N2W9 510 aaPredicted RBP24.5■■□□□ 1.51
PARP1-208ENST00000491816 ADRA2BP18089 450 aa24.49■■□□□ 1.51
PARP1-208ENST00000491816 MSH5O43196 834 aa24.48■■□□□ 1.51
PARP1-208ENST00000491816 POTEDQ86YR6 584 aa24.07■■□□□ 1.44
PARP1-208ENST00000491816 MAPK8IP2Q13387 824 aaPredicted RBP22.54■■□□□ 1.2
PARP1-208ENST00000491816 DMRT2Q9Y5R5 561 aa22.28■■□□□ 1.16
PARP1-208ENST00000491816 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
PARP1-208ENST00000491816 PPP4R3CPQ6ZMV5 832 aa21.9■■□□□ 1.1
PARP1-208ENST00000491816 CNKSR2Q8WXI2 1034 aa21.45■■□□□ 1.02
PARP1-208ENST00000491816 DCAF8L1A6NGE4 600 aa21.43■■□□□ 1.02
PARP1-208ENST00000491816 HOXD11P31277 338 aaPredicted RBP21.43■■□□□ 1.02
PARP1-208ENST00000491816 RNF216Q9NWF9 866 aaPredicted RBP21.25■□□□□ 0.99
PARP1-208ENST00000491816 CACNB1Q02641 598 aaPredicted RBP21.11■□□□□ 0.97
PARP1-208ENST00000491816 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
PARP1-208ENST00000491816 RNF39Q9H2S5 420 aa20.93■□□□□ 0.94
PARP1-208ENST00000491816 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
PARP1-208ENST00000491816 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
PARP1-208ENST00000491816 C1QBPQ07021 282 aaKnown RBP20.58■□□□□ 0.89
PARP1-208ENST00000491816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.45■□□□□ 0.86
PARP1-208ENST00000491816 KCNA4P22459 653 aa20.34■□□□□ 0.85
PARP1-208ENST00000491816 U3KPZ7 1027 aaPredicted RBP20.04■□□□□ 0.8
PARP1-208ENST00000491816 SLC4A2P04920 1241 aa19.84■□□□□ 0.77
PARP1-208ENST00000491816 SPINK5Q9NQ38 1064 aaPredicted RBP19.81■□□□□ 0.76
PARP1-208ENST00000491816 CAPN15O75808 1086 aa19.72■□□□□ 0.75
PARP1-208ENST00000491816 DSG3P32926 999 aa19.62■□□□□ 0.73
PARP1-208ENST00000491816 TRHP20396 242 aaPredicted RBP19.43■□□□□ 0.7
PARP1-208ENST00000491816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
PARP1-208ENST00000491816 APLP2Q06481 763 aa19.32■□□□□ 0.68
PARP1-208ENST00000491816 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
PARP1-208ENST00000491816 ABCB7O75027 752 aa19.31■□□□□ 0.68
PARP1-208ENST00000491816 ZNF219Q9P2Y4 722 aaPredicted RBP19.27■□□□□ 0.68
PARP1-208ENST00000491816 SAMD1Q6SPF0 538 aaPredicted RBP19.24■□□□□ 0.67
PARP1-208ENST00000491816 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
PARP1-208ENST00000491816 MYCNP04198 464 aaPredicted RBP19.12■□□□□ 0.65
PARP1-208ENST00000491816 FOXD4L1Q9NU39 408 aa18.91■□□□□ 0.62
PARP1-208ENST00000491816 POLA2Q14181 598 aa18.89■□□□□ 0.61
PARP1-208ENST00000491816 POTEHQ6S545 545 aa18.83■□□□□ 0.6
PARP1-208ENST00000491816 ATF5Q9Y2D1 282 aaPredicted RBP18.82■□□□□ 0.6
PARP1-208ENST00000491816 ZBTB22O15209 634 aa18.72■□□□□ 0.59
PARP1-208ENST00000491816 RBM42Q9BTD8 480 aaKnown RBP18.62■□□□□ 0.57
PARP1-208ENST00000491816 ZBTB12Q9Y330 459 aaPredicted RBP18.36■□□□□ 0.53
PARP1-208ENST00000491816 CHRDL2Q6WN34 429 aa18.3■□□□□ 0.52
PARP1-208ENST00000491816 ATXN8OSP0DMR3 200 aa18.28■□□□□ 0.52
PARP1-208ENST00000491816 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
PARP1-208ENST00000491816 AKT1S1Q96B36 256 aa18.23■□□□□ 0.51
PARP1-208ENST00000491816 REM2Q8IYK8 340 aaPredicted RBP18.11■□□□□ 0.49
PARP1-208ENST00000491816 FBLN2P98095 1184 aa17.95■□□□□ 0.46
PARP1-208ENST00000491816 PITPNM1O00562 1244 aa17.92■□□□□ 0.46
PARP1-208ENST00000491816 MKRN4PQ13434 485 aaPredicted RBP17.91■□□□□ 0.46
PARP1-208ENST00000491816 PIP4P2Q8N4L2 257 aa17.89■□□□□ 0.45
PARP1-208ENST00000491816 SPDYE2BA6NHP3 402 aa17.84■□□□□ 0.45
PARP1-208ENST00000491816 SPDYE6P0CI01 402 aa17.84■□□□□ 0.45
PARP1-208ENST00000491816 SPDYE2Q495Y8 402 aa17.84■□□□□ 0.45
PARP1-208ENST00000491816 CSRNP3Q8WYN3 585 aa17.81■□□□□ 0.44
PARP1-208ENST00000491816 FXR2P51116 673 aaKnown RBP eCLIP17.75■□□□□ 0.432e-11■■□□□ 12.3
PARP1-208ENST00000491816 ZNF692Q9BU19 519 aaPredicted RBP17.68■□□□□ 0.42
PARP1-208ENST00000491816 SP7Q8TDD2 431 aaPredicted RBP17.62■□□□□ 0.41
PARP1-208ENST00000491816 SSUH2Q9Y2M2 353 aa17.62■□□□□ 0.41
PARP1-208ENST00000491816 CLEC11AQ9Y240 323 aa17.61■□□□□ 0.41
PARP1-208ENST00000491816 HAX1O00165 279 aa17.58■□□□□ 0.4
PARP1-208ENST00000491816 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
PARP1-208ENST00000491816 SPDYE1Q8NFV5 336 aaPredicted RBP17.55■□□□□ 0.4
PARP1-208ENST00000491816 PRKAR2AP13861 404 aaKnown RBP17.46■□□□□ 0.39
PARP1-208ENST00000491816 EVX2Q03828 476 aa17.44■□□□□ 0.38
PARP1-208ENST00000491816 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
PARP1-208ENST00000491816 CHADLQ6NUI6 762 aa17.31■□□□□ 0.36
PARP1-208ENST00000491816 PRR29P0C7W0 189 aa17.27■□□□□ 0.36
PARP1-208ENST00000491816 C19orf67A6NJJ6 358 aa17.19■□□□□ 0.34
PARP1-208ENST00000491816 SPDYE4A6NLX3 237 aa17■□□□□ 0.31
PARP1-208ENST00000491816 FARP1Q9Y4F1 1045 aaPredicted RBP16.98■□□□□ 0.31
PARP1-208ENST00000491816 GABBR2O75899 941 aa16.97■□□□□ 0.31
PARP1-208ENST00000491816 CD44P16070 742 aaKnown RBP16.89■□□□□ 0.29
PARP1-208ENST00000491816 CREBZFQ9NS37 354 aa16.86■□□□□ 0.29
PARP1-208ENST00000491816 STAG3Q9UJ98 1225 aa16.85■□□□□ 0.29
PARP1-208ENST00000491816 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
PARP1-208ENST00000491816 POTEIP0CG38 1075 aa16.65■□□□□ 0.26
PARP1-208ENST00000491816 ZNF579Q8NAF0 562 aaKnown RBP16.58■□□□□ 0.24
PARP1-208ENST00000491816 MNX1P50219 401 aaPredicted RBP16.56■□□□□ 0.24
PARP1-208ENST00000491816 LHX8Q68G74 356 aa16.55■□□□□ 0.24
PARP1-208ENST00000491816 PROM2Q8N271 834 aa16.54■□□□□ 0.24
PARP1-208ENST00000491816 CLCN6P51797 869 aa16.53■□□□□ 0.24
PARP1-208ENST00000491816 GALR2O43603 387 aaPredicted RBP16.47■□□□□ 0.23
PARP1-208ENST00000491816 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
PARP1-208ENST00000491816 DCBLD2Q96PD2 775 aa16.47■□□□□ 0.23
PARP1-208ENST00000491816 PHF12Q96QT6 1004 aa16.46■□□□□ 0.23
PARP1-208ENST00000491816 PAK3O75914 559 aaPredicted RBP16.43■□□□□ 0.22
PARP1-208ENST00000491816 TSPYL2Q9H2G4 693 aaPredicted RBP16.27■□□□□ 0.2
PARP1-208ENST00000491816 MIER1Q8N108 512 aa16.24■□□□□ 0.19
PARP1-208ENST00000491816 MS4A3Q96HJ5 214 aa16.21■□□□□ 0.19
PARP1-208ENST00000491816 PELP1Q8IZL8 1130 aaKnown RBP16.19■□□□□ 0.18
PARP1-208ENST00000491816 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
PARP1-208ENST00000491816 FKBP8Q14318 412 aa16.14■□□□□ 0.17
PARP1-208ENST00000491816 POTEB2H3BUK9 544 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms