RNA–Protein interactions for RNA: ENST00000491612.1

TRMU-216, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 2

Gene TRMU, Length 2,933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-216ENST00000491612 NISCHQ9Y2I1 1504 aa29.74■■■□□ 2.35
TRMU-216ENST00000491612 SHROOM4Q9ULL8 1493 aa25.83■■□□□ 1.72
TRMU-216ENST00000491612 SUPT5HO00267 1087 aaKnown RBP25.39■■□□□ 1.66
TRMU-216ENST00000491612 ZCCHC6Q5VYS8 1495 aaKnown RBP25.17■■□□□ 1.62
TRMU-216ENST00000491612 CCDC180Q9P1Z9 1646 aa25.02■■□□□ 1.6
TRMU-216ENST00000491612 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
TRMU-216ENST00000491612 MYO15BQ96JP2 1530 aa24.69■■□□□ 1.54
TRMU-216ENST00000491612 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
TRMU-216ENST00000491612 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
TRMU-216ENST00000491612 DCAF1Q9Y4B6 1507 aa24.23■■□□□ 1.47
TRMU-216ENST00000491612 HRCP23327 699 aa24.21■■□□□ 1.47
TRMU-216ENST00000491612 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
TRMU-216ENST00000491612 PPARGC1BQ86YN6 1023 aaKnown RBP24.06■■□□□ 1.44
TRMU-216ENST00000491612 ABCC9O60706 1549 aa23.78■■□□□ 1.4
TRMU-216ENST00000491612 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
TRMU-216ENST00000491612 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
TRMU-216ENST00000491612 EHMT2Q96KQ7 1210 aa23.6■■□□□ 1.37
TRMU-216ENST00000491612 TRIM26Q12899 539 aaPredicted RBP23.53■■□□□ 1.36
TRMU-216ENST00000491612 TRIM41Q8WV44 630 aa23.52■■□□□ 1.36
TRMU-216ENST00000491612 FAM9AQ8IZU1 332 aaPredicted RBP23.51■■□□□ 1.35
TRMU-216ENST00000491612 RB1CC1Q8TDY2 1594 aa23.5■■□□□ 1.35
TRMU-216ENST00000491612 CECR2Q9BXF3 1484 aa23.34■■□□□ 1.33
TRMU-216ENST00000491612 MROH2BQ7Z745 1585 aa23.22■■□□□ 1.31
TRMU-216ENST00000491612 NACADO15069 1562 aa23.14■■□□□ 1.29
TRMU-216ENST00000491612 WIZO95785 1651 aa23.11■■□□□ 1.29
TRMU-216ENST00000491612 ZEB1P37275 1124 aaPredicted RBP22.98■■□□□ 1.27
TRMU-216ENST00000491612 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
TRMU-216ENST00000491612 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
TRMU-216ENST00000491612 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
TRMU-216ENST00000491612 ABCC8Q09428 1581 aa22.74■■□□□ 1.23
TRMU-216ENST00000491612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.73■■□□□ 1.23
TRMU-216ENST00000491612 PELP1Q8IZL8 1130 aaKnown RBP22.71■■□□□ 1.23
TRMU-216ENST00000491612 CCDC88BA6NC98 1476 aa22.68■■□□□ 1.22
TRMU-216ENST00000491612 SCAF1Q9H7N4 1312 aaKnown RBP22.66■■□□□ 1.22
TRMU-216ENST00000491612 TOP2AP11388 1531 aaKnown RBP22.63■■□□□ 1.21
TRMU-216ENST00000491612 SMARCA4P51532 1647 aa22.6■■□□□ 1.21
TRMU-216ENST00000491612 CCER1Q8TC90 406 aaPredicted RBP22.6■■□□□ 1.21
TRMU-216ENST00000491612 SMARCA2P51531 1590 aa22.57■■□□□ 1.2
TRMU-216ENST00000491612 SOGA1O94964 1423 aa22.57■■□□□ 1.2
TRMU-216ENST00000491612 UNC13AQ9UPW8 1703 aa22.5■■□□□ 1.19
TRMU-216ENST00000491612 CEP162Q5TB80 1403 aa22.48■■□□□ 1.19
TRMU-216ENST00000491612 RUSC2Q8N2Y8 1516 aa22.48■■□□□ 1.19
TRMU-216ENST00000491612 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
TRMU-216ENST00000491612 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
TRMU-216ENST00000491612 WRNQ14191 1432 aaPredicted RBP eCLIP22.39■■□□□ 1.18
TRMU-216ENST00000491612 CSRNP3Q8WYN3 585 aa22.39■■□□□ 1.18
TRMU-216ENST00000491612 TNIKQ9UKE5 1360 aa22.36■■□□□ 1.17
TRMU-216ENST00000491612 NEUROD1Q13562 356 aa22.29■■□□□ 1.16
TRMU-216ENST00000491612 MYT1Q01538 1121 aa22.26■■□□□ 1.15
TRMU-216ENST00000491612 DIEXFQ68CQ4 756 aaKnown RBP22.24■■□□□ 1.15
TRMU-216ENST00000491612 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
TRMU-216ENST00000491612 EEA1Q15075 1411 aa22.22■■□□□ 1.15
TRMU-216ENST00000491612 GOLGA3Q08378 1498 aa22.2■■□□□ 1.14
TRMU-216ENST00000491612 ACIN1Q9UKV3 1341 aaKnown RBP22.18■■□□□ 1.14
TRMU-216ENST00000491612 YTHDC1Q96MU7 727 aaKnown RBP22.17■■□□□ 1.14
TRMU-216ENST00000491612 GTF3C3Q9Y5Q9 886 aa22.15■■□□□ 1.14
TRMU-216ENST00000491612 SYNJ1O43426 1573 aa22.14■■□□□ 1.13
TRMU-216ENST00000491612 RANGAP1P46060 587 aaPredicted RBP22.11■■□□□ 1.13
TRMU-216ENST00000491612 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
TRMU-216ENST00000491612 PEG3Q9GZU2 1588 aa22.05■■□□□ 1.12
TRMU-216ENST00000491612 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
TRMU-216ENST00000491612 CLIP1P30622 1438 aa22.02■■□□□ 1.11
TRMU-216ENST00000491612 CENPBP07199 599 aaPredicted RBP22.01■■□□□ 1.11
TRMU-216ENST00000491612 ATAD2BQ9ULI0 1458 aa22.01■■□□□ 1.11
TRMU-216ENST00000491612 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
TRMU-216ENST00000491612 RAPGEF2Q9Y4G8 1499 aa21.97■■□□□ 1.11
TRMU-216ENST00000491612 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
TRMU-216ENST00000491612 KIF21BO75037 1637 aa21.96■■□□□ 1.11
TRMU-216ENST00000491612 VPS8Q8N3P4 1428 aa21.9■■□□□ 1.1
TRMU-216ENST00000491612 APLP2Q06481 763 aa21.86■■□□□ 1.09
TRMU-216ENST00000491612 MIER1Q8N108 512 aa21.79■■□□□ 1.08
TRMU-216ENST00000491612 TOP2BQ02880 1626 aa21.75■■□□□ 1.07
TRMU-216ENST00000491612 KANK4Q5T7N3 995 aaPredicted RBP21.68■■□□□ 1.06
TRMU-216ENST00000491612 ARAP1Q96P48 1450 aa21.64■■□□□ 1.05
TRMU-216ENST00000491612 PRXQ9BXM0 1461 aa21.63■■□□□ 1.05
TRMU-216ENST00000491612 BIVM-ERCC5R4GMW8 1640 aa21.63■■□□□ 1.05
TRMU-216ENST00000491612 CUX1P39880 1505 aa21.58■■□□□ 1.04
TRMU-216ENST00000491612 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
TRMU-216ENST00000491612 DHX57Q6P158 1386 aaKnown RBP21.56■■□□□ 1.04
TRMU-216ENST00000491612 ITGAEP38570 1179 aa21.49■■□□□ 1.03
TRMU-216ENST00000491612 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
TRMU-216ENST00000491612 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
TRMU-216ENST00000491612 HMGXB3Q12766 1538 aa21.43■■□□□ 1.02
TRMU-216ENST00000491612 ARHGAP35Q9NRY4 1499 aa21.42■■□□□ 1.02
TRMU-216ENST00000491612 CFTRP13569 1480 aa21.39■■□□□ 1.02
TRMU-216ENST00000491612 RRBP1Q9P2E9 1410 aaKnown RBP21.39■■□□□ 1.02
TRMU-216ENST00000491612 CLSPNQ9HAW4 1339 aa21.38■■□□□ 1.01
TRMU-216ENST00000491612 CCNB3Q8WWL7 1395 aa21.35■■□□□ 1.01
TRMU-216ENST00000491612 CUX2O14529 1486 aa21.31■■□□□ 1
TRMU-216ENST00000491612 IGF1RP08069 1367 aa21.3■■□□□ 1
TRMU-216ENST00000491612 RAB3GAP2Q9H2M9 1393 aa21.23■□□□□ 0.99
TRMU-216ENST00000491612 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
TRMU-216ENST00000491612 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
TRMU-216ENST00000491612 ATP1B4Q9UN42 357 aaPredicted RBP21.18■□□□□ 0.98
TRMU-216ENST00000491612 FGD5Q6ZNL6 1462 aa21.17■□□□□ 0.98
TRMU-216ENST00000491612 KCNH8Q96L42 1107 aa21.17■□□□□ 0.98
TRMU-216ENST00000491612 TIAM1Q13009 1591 aa21.17■□□□□ 0.98
TRMU-216ENST00000491612 PHLDB1Q86UU1 1377 aa21.16■□□□□ 0.98
TRMU-216ENST00000491612 FAM50AQ14320 339 aaKnown RBP21.15■□□□□ 0.98
TRMU-216ENST00000491612 MAPKBP1O60336 1514 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 338.3 ms