RNA–Protein interactions for RNA: ENST00000489779.1

ACTR3-207, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 2

Gene ACTR3, Length 545 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-207ENST00000489779 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
ACTR3-207ENST00000489779 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
ACTR3-207ENST00000489779 SENP3Q9H4L4 574 aaPredicted RBP21.39■■□□□ 1.01
ACTR3-207ENST00000489779 PHF23Q9BUL5 403 aaPredicted RBP21.04■□□□□ 0.96
ACTR3-207ENST00000489779 FOXD1Q16676 465 aa19.92■□□□□ 0.78
ACTR3-207ENST00000489779 MSH5O43196 834 aa18.76■□□□□ 0.59
ACTR3-207ENST00000489779 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
ACTR3-207ENST00000489779 POTEDQ86YR6 584 aa18.58■□□□□ 0.56
ACTR3-207ENST00000489779 PIAS4Q8N2W9 510 aaPredicted RBP18.56■□□□□ 0.56
ACTR3-207ENST00000489779 PPP6R1Q9UPN7 881 aa18.46■□□□□ 0.55
ACTR3-207ENST00000489779 ADRA2BP18089 450 aa18.37■□□□□ 0.53
ACTR3-207ENST00000489779 DMRT2Q9Y5R5 561 aa16.93■□□□□ 0.3
ACTR3-207ENST00000489779 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
ACTR3-207ENST00000489779 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
ACTR3-207ENST00000489779 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
ACTR3-207ENST00000489779 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
ACTR3-207ENST00000489779 CACNB1Q02641 598 aaPredicted RBP16.15■□□□□ 0.18
ACTR3-207ENST00000489779 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
ACTR3-207ENST00000489779 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
ACTR3-207ENST00000489779 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
ACTR3-207ENST00000489779 RNF39Q9H2S5 420 aa15.98■□□□□ 0.15
ACTR3-207ENST00000489779 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
ACTR3-207ENST00000489779 C1QBPQ07021 282 aaKnown RBP15.74■□□□□ 0.11
ACTR3-207ENST00000489779 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
ACTR3-207ENST00000489779 KCNA4P22459 653 aa15.65■□□□□ 0.1
ACTR3-207ENST00000489779 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
ACTR3-207ENST00000489779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.06
ACTR3-207ENST00000489779 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
ACTR3-207ENST00000489779 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
ACTR3-207ENST00000489779 CAPN15O75808 1086 aa14.88□□□□□ -0.03
ACTR3-207ENST00000489779 DSG3P32926 999 aa14.88□□□□□ -0.03
ACTR3-207ENST00000489779 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
ACTR3-207ENST00000489779 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
ACTR3-207ENST00000489779 APLP2Q06481 763 aa14.7□□□□□ -0.06
ACTR3-207ENST00000489779 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
ACTR3-207ENST00000489779 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
ACTR3-207ENST00000489779 ZNF219Q9P2Y4 722 aaPredicted RBP14.63□□□□□ -0.07
ACTR3-207ENST00000489779 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.08
ACTR3-207ENST00000489779 POTEHQ6S545 545 aa14.53□□□□□ -0.08
ACTR3-207ENST00000489779 SAMD1Q6SPF0 538 aaPredicted RBP14.53□□□□□ -0.08
ACTR3-207ENST00000489779 ABCB7O75027 752 aa14.51□□□□□ -0.09
ACTR3-207ENST00000489779 ZBTB22O15209 634 aa14.44□□□□□ -0.1
ACTR3-207ENST00000489779 FOXD4L1Q9NU39 408 aa14.41□□□□□ -0.1
ACTR3-207ENST00000489779 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
ACTR3-207ENST00000489779 RBM42Q9BTD8 480 aaKnown RBP14.23□□□□□ -0.13
ACTR3-207ENST00000489779 POLA2Q14181 598 aa14.17□□□□□ -0.14
ACTR3-207ENST00000489779 ATF5Q9Y2D1 282 aaPredicted RBP14.14□□□□□ -0.15
ACTR3-207ENST00000489779 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
ACTR3-207ENST00000489779 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
ACTR3-207ENST00000489779 CHRDL2Q6WN34 429 aa13.96□□□□□ -0.17
ACTR3-207ENST00000489779 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
ACTR3-207ENST00000489779 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
ACTR3-207ENST00000489779 AKT1S1Q96B36 256 aa13.86□□□□□ -0.19
ACTR3-207ENST00000489779 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
ACTR3-207ENST00000489779 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
ACTR3-207ENST00000489779 PIP4P2Q8N4L2 257 aa13.59□□□□□ -0.23
ACTR3-207ENST00000489779 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
ACTR3-207ENST00000489779 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
ACTR3-207ENST00000489779 FXR2P51116 673 aaKnown RBP eCLIP13.5□□□□□ -0.251e-6■■■■□ 22.5
ACTR3-207ENST00000489779 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
ACTR3-207ENST00000489779 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
ACTR3-207ENST00000489779 FBLN2P98095 1184 aa13.48□□□□□ -0.25
ACTR3-207ENST00000489779 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
ACTR3-207ENST00000489779 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
ACTR3-207ENST00000489779 HAX1O00165 279 aa13.35□□□□□ -0.27
ACTR3-207ENST00000489779 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
ACTR3-207ENST00000489779 SPDYE1Q8NFV5 336 aaPredicted RBP13.28□□□□□ -0.28
ACTR3-207ENST00000489779 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
ACTR3-207ENST00000489779 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
ACTR3-207ENST00000489779 PRKAR2AP13861 404 aaKnown RBP13.19□□□□□ -0.3
ACTR3-207ENST00000489779 EVX2Q03828 476 aa13.18□□□□□ -0.3
ACTR3-207ENST00000489779 C19orf67A6NJJ6 358 aa13.08□□□□□ -0.32
ACTR3-207ENST00000489779 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
ACTR3-207ENST00000489779 PRR29P0C7W0 189 aa12.98□□□□□ -0.33
ACTR3-207ENST00000489779 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
ACTR3-207ENST00000489779 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
ACTR3-207ENST00000489779 GABBR2O75899 941 aa12.89□□□□□ -0.35
ACTR3-207ENST00000489779 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
ACTR3-207ENST00000489779 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.37
ACTR3-207ENST00000489779 CLCN6P51797 869 aa12.71□□□□□ -0.37
ACTR3-207ENST00000489779 PROM2Q8N271 834 aa12.71□□□□□ -0.37
ACTR3-207ENST00000489779 FKBP8Q14318 412 aa12.7□□□□□ -0.38
ACTR3-207ENST00000489779 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
ACTR3-207ENST00000489779 LHX8Q68G74 356 aa12.68□□□□□ -0.38
ACTR3-207ENST00000489779 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
ACTR3-207ENST00000489779 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
ACTR3-207ENST00000489779 ZNF579Q8NAF0 562 aaKnown RBP12.61□□□□□ -0.39
ACTR3-207ENST00000489779 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
ACTR3-207ENST00000489779 DCBLD2Q96PD2 775 aa12.49□□□□□ -0.41
ACTR3-207ENST00000489779 GALR2O43603 387 aaPredicted RBP12.42□□□□□ -0.42
ACTR3-207ENST00000489779 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
ACTR3-207ENST00000489779 MNX1P50219 401 aaPredicted RBP12.42□□□□□ -0.42
ACTR3-207ENST00000489779 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
ACTR3-207ENST00000489779 PHF12Q96QT6 1004 aa12.35□□□□□ -0.43
ACTR3-207ENST00000489779 MIER1Q8N108 512 aa12.3□□□□□ -0.44
ACTR3-207ENST00000489779 PLCD3Q8N3E9 789 aa12.22□□□□□ -0.45
ACTR3-207ENST00000489779 FBXO3Q9UK99 471 aa12.22□□□□□ -0.45
ACTR3-207ENST00000489779 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
ACTR3-207ENST00000489779 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
ACTR3-207ENST00000489779 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms