RNA–Protein interactions for RNA: ENST00000489370.1

TMF1-204, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-204ENST00000489370 AEBP2Q6ZN18 517 aaPredicted RBP15.1■□□□□ 0.01
TMF1-204ENST00000489370 CHIC1Q5VXU3 224 aa14.96□□□□□ -0.01
TMF1-204ENST00000489370 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
TMF1-204ENST00000489370 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.36
TMF1-204ENST00000489370 PLPPR3Q6T4P5 718 aa12.25□□□□□ -0.45
TMF1-204ENST00000489370 FOXD1Q16676 465 aa11.86□□□□□ -0.51
TMF1-204ENST00000489370 ADRA2BP18089 450 aa11.55□□□□□ -0.56
TMF1-204ENST00000489370 PPP6R1Q9UPN7 881 aa11.55□□□□□ -0.56
TMF1-204ENST00000489370 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
TMF1-204ENST00000489370 MSH5O43196 834 aa10.9□□□□□ -0.66
TMF1-204ENST00000489370 PPP4R3CPQ6ZMV5 832 aa10.81□□□□□ -0.68
TMF1-204ENST00000489370 KCNA4P22459 653 aa10.72□□□□□ -0.69
TMF1-204ENST00000489370 SCAF1Q9H7N4 1312 aaKnown RBP10.65□□□□□ -0.7
TMF1-204ENST00000489370 NCBP3Q53F19 620 aaKnown RBP10.61□□□□□ -0.71
TMF1-204ENST00000489370 CNKSR2Q8WXI2 1034 aa10.48□□□□□ -0.73
TMF1-204ENST00000489370 MAPK8IP2Q13387 824 aaPredicted RBP10.43□□□□□ -0.74
TMF1-204ENST00000489370 NPM3O75607 178 aaKnown RBP10.4□□□□□ -0.74
TMF1-204ENST00000489370 SLC4A1APQ9BWU0 796 aaKnown RBP10.27□□□□□ -0.77
TMF1-204ENST00000489370 DMRT2Q9Y5R5 561 aa10.26□□□□□ -0.77
TMF1-204ENST00000489370 RNF216Q9NWF9 866 aaPredicted RBP10.23□□□□□ -0.77
TMF1-204ENST00000489370 HOXD11P31277 338 aaPredicted RBP10.14□□□□□ -0.79
TMF1-204ENST00000489370 EHMT2Q96KQ7 1210 aa10.14□□□□□ -0.79
TMF1-204ENST00000489370 DNAJC5BQ9UF47 199 aa10.11□□□□□ -0.79
TMF1-204ENST00000489370 CSRNP3Q8WYN3 585 aa9.98□□□□□ -0.81
TMF1-204ENST00000489370 FOXD4L1Q9NU39 408 aa9.84□□□□□ -0.83
TMF1-204ENST00000489370 ZBTB22O15209 634 aa9.83□□□□□ -0.84
TMF1-204ENST00000489370 DCAF8L1A6NGE4 600 aa9.8□□□□□ -0.84
TMF1-204ENST00000489370 SLC4A2P04920 1241 aa9.77□□□□□ -0.85
TMF1-204ENST00000489370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.66□□□□□ -0.86
TMF1-204ENST00000489370 MYCNP04198 464 aaPredicted RBP9.62□□□□□ -0.87
TMF1-204ENST00000489370 POTEDQ86YR6 584 aa9.58□□□□□ -0.88
TMF1-204ENST00000489370 ATXN8OSP0DMR3 200 aa9.52□□□□□ -0.89
TMF1-204ENST00000489370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.5□□□□□ -0.89
TMF1-204ENST00000489370 HNRNPUL2Q1KMD3 747 aaKnown RBP9.5□□□□□ -0.89
TMF1-204ENST00000489370 U3KPZ7 1027 aaPredicted RBP9.49□□□□□ -0.89
TMF1-204ENST00000489370 SAMD1Q6SPF0 538 aaPredicted RBP9.45□□□□□ -0.9
TMF1-204ENST00000489370 APLP2Q06481 763 aa9.37□□□□□ -0.91
TMF1-204ENST00000489370 RNF39Q9H2S5 420 aa9.33□□□□□ -0.92
TMF1-204ENST00000489370 ATF5Q9Y2D1 282 aaPredicted RBP9.32□□□□□ -0.92
TMF1-204ENST00000489370 C1QBPQ07021 282 aaKnown RBP9.27□□□□□ -0.93
TMF1-204ENST00000489370 ZNF219Q9P2Y4 722 aaPredicted RBP9.2□□□□□ -0.94
TMF1-204ENST00000489370 SPINK5Q9NQ38 1064 aaPredicted RBP9.16□□□□□ -0.94
TMF1-204ENST00000489370 CAPN15O75808 1086 aa9.15□□□□□ -0.94
TMF1-204ENST00000489370 TRHP20396 242 aaPredicted RBP9.15□□□□□ -0.94
TMF1-204ENST00000489370 POLA2Q14181 598 aa9.05□□□□□ -0.96
TMF1-204ENST00000489370 FKBP8Q14318 412 aa9.01□□□□□ -0.97
TMF1-204ENST00000489370 CACNB1Q02641 598 aaPredicted RBP8.98□□□□□ -0.97
TMF1-204ENST00000489370 FBLN2P98095 1184 aa8.97□□□□□ -0.97
TMF1-204ENST00000489370 ABCB7O75027 752 aa8.95□□□□□ -0.98
TMF1-204ENST00000489370 DSG3P32926 999 aa8.95□□□□□ -0.98
TMF1-204ENST00000489370 ZBTB12Q9Y330 459 aaPredicted RBP8.93□□□□□ -0.98
TMF1-204ENST00000489370 MKRN4PQ13434 485 aaPredicted RBP8.92□□□□□ -0.98
TMF1-204ENST00000489370 SPDYE4A6NLX3 237 aa8.84□□□□□ -0.99
TMF1-204ENST00000489370 PROM2Q8N271 834 aa8.7□□□□□ -1.02
TMF1-204ENST00000489370 ZNF692Q9BU19 519 aaPredicted RBP8.7□□□□□ -1.02
TMF1-204ENST00000489370 SPDYE2BA6NHP3 402 aa8.69□□□□□ -1.02
TMF1-204ENST00000489370 SPDYE6P0CI01 402 aa8.69□□□□□ -1.02
TMF1-204ENST00000489370 SPDYE2Q495Y8 402 aa8.69□□□□□ -1.02
TMF1-204ENST00000489370 OSCARQ8IYS5 282 aa8.69□□□□□ -1.02
TMF1-204ENST00000489370 FBXO3Q9UK99 471 aa8.69□□□□□ -1.02
TMF1-204ENST00000489370 SSUH2Q9Y2M2 353 aa8.62□□□□□ -1.03
TMF1-204ENST00000489370 PABPN1Q86U42 306 aaKnown RBP eCLIP8.57□□□□□ -1.04
TMF1-204ENST00000489370 RBM42Q9BTD8 480 aaKnown RBP8.55□□□□□ -1.04
TMF1-204ENST00000489370 AMER1Q5JTC6 1135 aaPredicted RBP8.54□□□□□ -1.04
TMF1-204ENST00000489370 STAG3Q9UJ98 1225 aa8.52□□□□□ -1.05
TMF1-204ENST00000489370 VASPP50552 380 aaPredicted RBP8.5□□□□□ -1.05
TMF1-204ENST00000489370 AKT1S1Q96B36 256 aa8.48□□□□□ -1.05
TMF1-204ENST00000489370 RTN4Q9NQC3 1192 aaKnown RBP8.47□□□□□ -1.05
TMF1-204ENST00000489370 IFNLR1Q8IU57 520 aaPredicted RBP8.42□□□□□ -1.06
TMF1-204ENST00000489370 MIER1Q8N108 512 aa8.39□□□□□ -1.07
TMF1-204ENST00000489370 SPDYE1Q8NFV5 336 aaPredicted RBP8.39□□□□□ -1.07
TMF1-204ENST00000489370 REM2Q8IYK8 340 aaPredicted RBP8.38□□□□□ -1.07
TMF1-204ENST00000489370 PLCD3Q8N3E9 789 aa8.38□□□□□ -1.07
TMF1-204ENST00000489370 KLHL34Q8N239 644 aa8.37□□□□□ -1.07
TMF1-204ENST00000489370 PLEKHG5O94827 1062 aa8.36□□□□□ -1.07
TMF1-204ENST00000489370 CLEC11AQ9Y240 323 aa8.34□□□□□ -1.07
TMF1-204ENST00000489370 PRR29P0C7W0 189 aa8.32□□□□□ -1.08
TMF1-204ENST00000489370 SPOCK2Q92563 424 aa8.31□□□□□ -1.08
TMF1-204ENST00000489370 ZBTB47Q9UFB7 747 aaPredicted RBP8.31□□□□□ -1.08
TMF1-204ENST00000489370 PITPNM1O00562 1244 aa8.25□□□□□ -1.09
TMF1-204ENST00000489370 CREBZFQ9NS37 354 aa8.22□□□□□ -1.09
TMF1-204ENST00000489370 PKD2Q13563 968 aa8.19□□□□□ -1.1
TMF1-204ENST00000489370 NPM1P06748 294 aaKnown RBP eCLIP8.14□□□□□ -1.11
TMF1-204ENST00000489370 MNX1P50219 401 aaPredicted RBP8.14□□□□□ -1.11
TMF1-204ENST00000489370 CIZ1Q9ULV3 898 aaPredicted RBP8.14□□□□□ -1.11
TMF1-204ENST00000489370 ECM2O94769 699 aaPredicted RBP8.13□□□□□ -1.11
TMF1-204ENST00000489370 NUBP1P53384 320 aa8.13□□□□□ -1.11
TMF1-204ENST00000489370 GSE1Q14687 1217 aa8.12□□□□□ -1.11
TMF1-204ENST00000489370 FXR2P51116 673 aaKnown RBP eCLIP8.11□□□□□ -1.11
TMF1-204ENST00000489370 DCAF8Q5TAQ9 597 aa8.1□□□□□ -1.11
TMF1-204ENST00000489370 CHADLQ6NUI6 762 aa8.1□□□□□ -1.11
TMF1-204ENST00000489370 TRIM41Q8WV44 630 aa8.1□□□□□ -1.11
TMF1-204ENST00000489370 CHRDL2Q6WN34 429 aa8.09□□□□□ -1.11
TMF1-204ENST00000489370 PRKAR2AP13861 404 aaKnown RBP8.08□□□□□ -1.12
TMF1-204ENST00000489370 DCAF8L2P0C7V8 631 aa8.07□□□□□ -1.12
TMF1-204ENST00000489370 FAM212AQ96EL1 285 aa8.07□□□□□ -1.12
TMF1-204ENST00000489370 FARP1Q9Y4F1 1045 aaPredicted RBP8.06□□□□□ -1.12
TMF1-204ENST00000489370 RASEFQ8IZ41 740 aa8.03□□□□□ -1.12
TMF1-204ENST00000489370 PIP4P2Q8N4L2 257 aa8.03□□□□□ -1.12
TMF1-204ENST00000489370 RGL2O15211 777 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms