RNA–Protein interactions for RNA: ENST00000488421.1

ATG2B-204, Transcript of autophagy related 2B, humanhuman

TSL 4

Gene ATG2B, Length 522 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2B-204ENST00000488421 AEBP2Q6ZN18 517 aaPredicted RBP29.1■■■□□ 2.25
ATG2B-204ENST00000488421 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
ATG2B-204ENST00000488421 SENP3Q9H4L4 574 aaPredicted RBP24.67■■□□□ 1.54
ATG2B-204ENST00000488421 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
ATG2B-204ENST00000488421 FOXD1Q16676 465 aa23.16■■□□□ 1.3
ATG2B-204ENST00000488421 POTEDQ86YR6 584 aa21.69■■□□□ 1.06
ATG2B-204ENST00000488421 MSH5O43196 834 aa21.62■■□□□ 1.05
ATG2B-204ENST00000488421 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
ATG2B-204ENST00000488421 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
ATG2B-204ENST00000488421 PIAS4Q8N2W9 510 aaPredicted RBP21.46■■□□□ 1.03
ATG2B-204ENST00000488421 ADRA2BP18089 450 aa21.36■■□□□ 1.01
ATG2B-204ENST00000488421 MAPK8IP2Q13387 824 aaPredicted RBP19.75■□□□□ 0.75
ATG2B-204ENST00000488421 DMRT2Q9Y5R5 561 aa19.58■□□□□ 0.72
ATG2B-204ENST00000488421 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
ATG2B-204ENST00000488421 PPP4R3CPQ6ZMV5 832 aa18.94■□□□□ 0.62
ATG2B-204ENST00000488421 HOXD11P31277 338 aaPredicted RBP18.78■□□□□ 0.6
ATG2B-204ENST00000488421 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
ATG2B-204ENST00000488421 DCAF8L1A6NGE4 600 aa18.68■□□□□ 0.58
ATG2B-204ENST00000488421 CNKSR2Q8WXI2 1034 aa18.59■□□□□ 0.57
ATG2B-204ENST00000488421 RNF39Q9H2S5 420 aa18.52■□□□□ 0.56
ATG2B-204ENST00000488421 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
ATG2B-204ENST00000488421 C1QBPQ07021 282 aaKnown RBP18.16■□□□□ 0.5
ATG2B-204ENST00000488421 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
ATG2B-204ENST00000488421 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
ATG2B-204ENST00000488421 NPM3O75607 178 aaKnown RBP17.9■□□□□ 0.46
ATG2B-204ENST00000488421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.44
ATG2B-204ENST00000488421 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
ATG2B-204ENST00000488421 SPINK5Q9NQ38 1064 aaPredicted RBP17.35■□□□□ 0.37
ATG2B-204ENST00000488421 KCNA4P22459 653 aa17.33■□□□□ 0.36
ATG2B-204ENST00000488421 DSG3P32926 999 aa17.26■□□□□ 0.35
ATG2B-204ENST00000488421 SLC4A2P04920 1241 aa17.23■□□□□ 0.35
ATG2B-204ENST00000488421 CAPN15O75808 1086 aa17.2■□□□□ 0.34
ATG2B-204ENST00000488421 POTEHQ6S545 545 aa16.89■□□□□ 0.29
ATG2B-204ENST00000488421 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
ATG2B-204ENST00000488421 ABCB7O75027 752 aa16.84■□□□□ 0.29
ATG2B-204ENST00000488421 ZNF219Q9P2Y4 722 aaPredicted RBP16.79■□□□□ 0.28
ATG2B-204ENST00000488421 APLP2Q06481 763 aa16.73■□□□□ 0.27
ATG2B-204ENST00000488421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
ATG2B-204ENST00000488421 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
ATG2B-204ENST00000488421 SAMD1Q6SPF0 538 aaPredicted RBP16.65■□□□□ 0.26
ATG2B-204ENST00000488421 MYCNP04198 464 aaPredicted RBP16.47■□□□□ 0.23
ATG2B-204ENST00000488421 POLA2Q14181 598 aa16.39■□□□□ 0.21
ATG2B-204ENST00000488421 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
ATG2B-204ENST00000488421 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
ATG2B-204ENST00000488421 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
ATG2B-204ENST00000488421 FOXD4L1Q9NU39 408 aa16.18■□□□□ 0.18
ATG2B-204ENST00000488421 CHRDL2Q6WN34 429 aa16.17■□□□□ 0.18
ATG2B-204ENST00000488421 ZBTB22O15209 634 aa16.03■□□□□ 0.16
ATG2B-204ENST00000488421 AKT1S1Q96B36 256 aa15.96■□□□□ 0.15
ATG2B-204ENST00000488421 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
ATG2B-204ENST00000488421 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
ATG2B-204ENST00000488421 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
ATG2B-204ENST00000488421 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.12
ATG2B-204ENST00000488421 PITPNM1O00562 1244 aa15.72■□□□□ 0.11
ATG2B-204ENST00000488421 SP7Q8TDD2 431 aaPredicted RBP15.69■□□□□ 0.1
ATG2B-204ENST00000488421 ATXN8OSP0DMR3 200 aa15.68■□□□□ 0.1
ATG2B-204ENST00000488421 FXR2P51116 673 aaKnown RBP eCLIP15.64■□□□□ 0.09
ATG2B-204ENST00000488421 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
ATG2B-204ENST00000488421 SPDYE2BA6NHP3 402 aa15.48■□□□□ 0.07
ATG2B-204ENST00000488421 SPDYE6P0CI01 402 aa15.48■□□□□ 0.07
ATG2B-204ENST00000488421 SPDYE2Q495Y8 402 aa15.48■□□□□ 0.07
ATG2B-204ENST00000488421 HAX1O00165 279 aa15.46■□□□□ 0.07
ATG2B-204ENST00000488421 EVX2Q03828 476 aa15.44■□□□□ 0.06
ATG2B-204ENST00000488421 FBLN2P98095 1184 aa15.42■□□□□ 0.06
ATG2B-204ENST00000488421 SSUH2Q9Y2M2 353 aa15.33■□□□□ 0.04
ATG2B-204ENST00000488421 PRKAR2AP13861 404 aaKnown RBP15.25■□□□□ 0.03
ATG2B-204ENST00000488421 SPDYE1Q8NFV5 336 aaPredicted RBP15.24■□□□□ 0.03
ATG2B-204ENST00000488421 ZNF692Q9BU19 519 aaPredicted RBP15.24■□□□□ 0.03
ATG2B-204ENST00000488421 CLEC11AQ9Y240 323 aa15.24■□□□□ 0.03
ATG2B-204ENST00000488421 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
ATG2B-204ENST00000488421 C19orf67A6NJJ6 358 aa15.15■□□□□ 0.02
ATG2B-204ENST00000488421 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
ATG2B-204ENST00000488421 CHADLQ6NUI6 762 aa15.09■□□□□ 0.01
ATG2B-204ENST00000488421 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
ATG2B-204ENST00000488421 GABBR2O75899 941 aa14.98□□□□□ -0.01
ATG2B-204ENST00000488421 PRR29P0C7W0 189 aa14.94□□□□□ -0.02
ATG2B-204ENST00000488421 FARP1Q9Y4F1 1045 aaPredicted RBP14.79□□□□□ -0.04
ATG2B-204ENST00000488421 POTEIP0CG38 1075 aa14.76□□□□□ -0.05
ATG2B-204ENST00000488421 CD44P16070 742 aaKnown RBP14.75□□□□□ -0.05
ATG2B-204ENST00000488421 LHX8Q68G74 356 aa14.71□□□□□ -0.05
ATG2B-204ENST00000488421 CREBZFQ9NS37 354 aa14.64□□□□□ -0.07
ATG2B-204ENST00000488421 ZNF579Q8NAF0 562 aaKnown RBP14.54□□□□□ -0.08
ATG2B-204ENST00000488421 SPDYE4A6NLX3 237 aa14.5□□□□□ -0.09
ATG2B-204ENST00000488421 CLCN6P51797 869 aa14.49□□□□□ -0.09
ATG2B-204ENST00000488421 ZRANB1Q9UGI0 708 aa14.49□□□□□ -0.09
ATG2B-204ENST00000488421 STAG3Q9UJ98 1225 aa14.48□□□□□ -0.09
ATG2B-204ENST00000488421 GALR2O43603 387 aaPredicted RBP14.41□□□□□ -0.1
ATG2B-204ENST00000488421 MNX1P50219 401 aaPredicted RBP14.41□□□□□ -0.1
ATG2B-204ENST00000488421 DCBLD2Q96PD2 775 aa14.39□□□□□ -0.11
ATG2B-204ENST00000488421 PHF12Q96QT6 1004 aa14.34□□□□□ -0.11
ATG2B-204ENST00000488421 POTEB2H3BUK9 544 aa14.27□□□□□ -0.13
ATG2B-204ENST00000488421 PELP1Q8IZL8 1130 aaKnown RBP14.23□□□□□ -0.13
ATG2B-204ENST00000488421 PROM2Q8N271 834 aa14.23□□□□□ -0.13
ATG2B-204ENST00000488421 OTUD5Q96G74 571 aa14.21□□□□□ -0.13
ATG2B-204ENST00000488421 NPM1P06748 294 aaKnown RBP eCLIP14.19□□□□□ -0.14
ATG2B-204ENST00000488421 PAK3O75914 559 aaPredicted RBP14.18□□□□□ -0.14
ATG2B-204ENST00000488421 MS4A3Q96HJ5 214 aa14.13□□□□□ -0.15
ATG2B-204ENST00000488421 ASTLQ6HA08 431 aaPredicted RBP14.08□□□□□ -0.16
ATG2B-204ENST00000488421 ATMINO43313 823 aaPredicted RBP14.05□□□□□ -0.16
ATG2B-204ENST00000488421 POTEJP0CG39 1038 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms