RNA–Protein interactions for RNA: ENST00000488262.1

LINC02053-202, Transcript of long intergenic non-protein coding RNA 2053, humanhuman

TSL 1 (best) BASIC

Gene LINC02053, Length 940 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02053-202ENST00000488262 AEBP2Q6ZN18 517 aaPredicted RBP28.79■■■□□ 2.2
LINC02053-202ENST00000488262 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
LINC02053-202ENST00000488262 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
LINC02053-202ENST00000488262 PHF23Q9BUL5 403 aaPredicted RBP24.21■■□□□ 1.47
LINC02053-202ENST00000488262 FOXD1Q16676 465 aa22.88■■□□□ 1.25
LINC02053-202ENST00000488262 PLPPR3Q6T4P5 718 aa21.81■■□□□ 1.08
LINC02053-202ENST00000488262 MSH5O43196 834 aa21.4■■□□□ 1.02
LINC02053-202ENST00000488262 PIAS4Q8N2W9 510 aaPredicted RBP21.4■■□□□ 1.02
LINC02053-202ENST00000488262 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
LINC02053-202ENST00000488262 ADRA2BP18089 450 aa21.33■■□□□ 1.01
LINC02053-202ENST00000488262 POTEDQ86YR6 584 aa20.92■□□□□ 0.94
LINC02053-202ENST00000488262 MAPK8IP2Q13387 824 aaPredicted RBP19.59■□□□□ 0.73
LINC02053-202ENST00000488262 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
LINC02053-202ENST00000488262 DMRT2Q9Y5R5 561 aa19.46■□□□□ 0.71
LINC02053-202ENST00000488262 PPP4R3CPQ6ZMV5 832 aa19.12■□□□□ 0.65
LINC02053-202ENST00000488262 CNKSR2Q8WXI2 1034 aa18.75■□□□□ 0.59
LINC02053-202ENST00000488262 HOXD11P31277 338 aaPredicted RBP18.73■□□□□ 0.59
LINC02053-202ENST00000488262 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
LINC02053-202ENST00000488262 RNF216Q9NWF9 866 aaPredicted RBP18.59■□□□□ 0.57
LINC02053-202ENST00000488262 CACNB1Q02641 598 aaPredicted RBP18.38■□□□□ 0.53
LINC02053-202ENST00000488262 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
LINC02053-202ENST00000488262 RNF39Q9H2S5 420 aa18.27■□□□□ 0.52
LINC02053-202ENST00000488262 NPM3O75607 178 aaKnown RBP18.14■□□□□ 0.49
LINC02053-202ENST00000488262 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
LINC02053-202ENST00000488262 C1QBPQ07021 282 aaKnown RBP17.98■□□□□ 0.47
LINC02053-202ENST00000488262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
LINC02053-202ENST00000488262 KCNA4P22459 653 aa17.79■□□□□ 0.44
LINC02053-202ENST00000488262 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
LINC02053-202ENST00000488262 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
LINC02053-202ENST00000488262 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
LINC02053-202ENST00000488262 CAPN15O75808 1086 aa17.22■□□□□ 0.35
LINC02053-202ENST00000488262 DSG3P32926 999 aa17.11■□□□□ 0.33
LINC02053-202ENST00000488262 APLP2Q06481 763 aa16.97■□□□□ 0.31
LINC02053-202ENST00000488262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.31
LINC02053-202ENST00000488262 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
LINC02053-202ENST00000488262 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
LINC02053-202ENST00000488262 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
LINC02053-202ENST00000488262 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
LINC02053-202ENST00000488262 ABCB7O75027 752 aa16.83■□□□□ 0.28
LINC02053-202ENST00000488262 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
LINC02053-202ENST00000488262 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
LINC02053-202ENST00000488262 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
LINC02053-202ENST00000488262 POLA2Q14181 598 aa16.47■□□□□ 0.23
LINC02053-202ENST00000488262 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
LINC02053-202ENST00000488262 POTEHQ6S545 545 aa16.39■□□□□ 0.21
LINC02053-202ENST00000488262 ZBTB22O15209 634 aa16.38■□□□□ 0.21
LINC02053-202ENST00000488262 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
LINC02053-202ENST00000488262 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
LINC02053-202ENST00000488262 ATXN8OSP0DMR3 200 aa16.05■□□□□ 0.16
LINC02053-202ENST00000488262 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
LINC02053-202ENST00000488262 CHRDL2Q6WN34 429 aa15.97■□□□□ 0.15
LINC02053-202ENST00000488262 AKT1S1Q96B36 256 aa15.93■□□□□ 0.14
LINC02053-202ENST00000488262 REM2Q8IYK8 340 aaPredicted RBP15.8■□□□□ 0.12
LINC02053-202ENST00000488262 FBLN2P98095 1184 aa15.73■□□□□ 0.11
LINC02053-202ENST00000488262 PITPNM1O00562 1244 aa15.65■□□□□ 0.1
LINC02053-202ENST00000488262 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
LINC02053-202ENST00000488262 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
LINC02053-202ENST00000488262 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
LINC02053-202ENST00000488262 SPDYE2Q495Y8 402 aa15.62■□□□□ 0.09
LINC02053-202ENST00000488262 PIP4P2Q8N4L2 257 aa15.6■□□□□ 0.09
LINC02053-202ENST00000488262 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
LINC02053-202ENST00000488262 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.07
LINC02053-202ENST00000488262 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
LINC02053-202ENST00000488262 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
LINC02053-202ENST00000488262 SSUH2Q9Y2M2 353 aa15.43■□□□□ 0.06
LINC02053-202ENST00000488262 SPDYE1Q8NFV5 336 aaPredicted RBP15.36■□□□□ 0.05
LINC02053-202ENST00000488262 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
LINC02053-202ENST00000488262 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
LINC02053-202ENST00000488262 HAX1O00165 279 aa15.31■□□□□ 0.04
LINC02053-202ENST00000488262 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
LINC02053-202ENST00000488262 PABPN1Q86U42 306 aaKnown RBP eCLIP15.23■□□□□ 0.03
LINC02053-202ENST00000488262 EVX2Q03828 476 aa15.13■□□□□ 0.01
LINC02053-202ENST00000488262 PRR29P0C7W0 189 aa15.08■□□□□ 0
LINC02053-202ENST00000488262 CHADLQ6NUI6 762 aa15.08■□□□□ 0
LINC02053-202ENST00000488262 C19orf67A6NJJ6 358 aa14.99□□□□□ -0.01
LINC02053-202ENST00000488262 SPDYE4A6NLX3 237 aa14.89□□□□□ -0.03
LINC02053-202ENST00000488262 FARP1Q9Y4F1 1045 aaPredicted RBP14.83□□□□□ -0.04
LINC02053-202ENST00000488262 GABBR2O75899 941 aa14.77□□□□□ -0.05
LINC02053-202ENST00000488262 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.05
LINC02053-202ENST00000488262 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
LINC02053-202ENST00000488262 CREBZFQ9NS37 354 aa14.72□□□□□ -0.05
LINC02053-202ENST00000488262 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
LINC02053-202ENST00000488262 PROM2Q8N271 834 aa14.52□□□□□ -0.09
LINC02053-202ENST00000488262 ZNF579Q8NAF0 562 aaKnown RBP14.51□□□□□ -0.09
LINC02053-202ENST00000488262 CLCN6P51797 869 aa14.49□□□□□ -0.09
LINC02053-202ENST00000488262 POTEIP0CG38 1075 aa14.47□□□□□ -0.09
LINC02053-202ENST00000488262 MNX1P50219 401 aaPredicted RBP14.47□□□□□ -0.09
LINC02053-202ENST00000488262 NPM1P06748 294 aaKnown RBP eCLIP14.42□□□□□ -0.1
LINC02053-202ENST00000488262 PAK3O75914 559 aaPredicted RBP14.41□□□□□ -0.1
LINC02053-202ENST00000488262 LHX8Q68G74 356 aa14.4□□□□□ -0.1
LINC02053-202ENST00000488262 DCBLD2Q96PD2 775 aa14.37□□□□□ -0.11
LINC02053-202ENST00000488262 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
LINC02053-202ENST00000488262 PHF12Q96QT6 1004 aa14.36□□□□□ -0.11
LINC02053-202ENST00000488262 MIER1Q8N108 512 aa14.2□□□□□ -0.14
LINC02053-202ENST00000488262 TSPYL2Q9H2G4 693 aaPredicted RBP14.2□□□□□ -0.14
LINC02053-202ENST00000488262 PLEKHG5O94827 1062 aa14.17□□□□□ -0.14
LINC02053-202ENST00000488262 FKBP8Q14318 412 aa14.16□□□□□ -0.14
LINC02053-202ENST00000488262 MS4A3Q96HJ5 214 aa14.16□□□□□ -0.14
LINC02053-202ENST00000488262 CCDC61Q9Y6R9 512 aa14.13□□□□□ -0.15
LINC02053-202ENST00000488262 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms