RNA–Protein interactions for RNA: ENST00000487678.1

PDCD10-213, Transcript of programmed cell death 10, humanhuman

TSL 3

Gene PDCD10, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-213ENST00000487678 AEBP2Q6ZN18 517 aaPredicted RBP37.68■■■■□ 3.62
PDCD10-213ENST00000487678 CHIC1Q5VXU3 224 aa35.61■■■■□ 3.29
PDCD10-213ENST00000487678 SENP3Q9H4L4 574 aaPredicted RBP31.88■■■□□ 2.69
PDCD10-213ENST00000487678 PHF23Q9BUL5 403 aaPredicted RBP31.59■■■□□ 2.65
PDCD10-213ENST00000487678 FOXD1Q16676 465 aa29.9■■■□□ 2.38
PDCD10-213ENST00000487678 PLPPR3Q6T4P5 718 aa28.36■■■□□ 2.13
PDCD10-213ENST00000487678 PPP6R1Q9UPN7 881 aa28.04■■■□□ 2.08
PDCD10-213ENST00000487678 ADRA2BP18089 450 aa27.92■■■□□ 2.06
PDCD10-213ENST00000487678 PIAS4Q8N2W9 510 aaPredicted RBP27.86■■■□□ 2.05
PDCD10-213ENST00000487678 MSH5O43196 834 aa27.76■■■□□ 2.03
PDCD10-213ENST00000487678 POTEDQ86YR6 584 aa27.3■■□□□ 1.96
PDCD10-213ENST00000487678 MAPK8IP2Q13387 824 aaPredicted RBP25.7■■□□□ 1.7
PDCD10-213ENST00000487678 DMRT2Q9Y5R5 561 aa25.35■■□□□ 1.65
PDCD10-213ENST00000487678 SCAF1Q9H7N4 1312 aaKnown RBP25.24■■□□□ 1.63
PDCD10-213ENST00000487678 PPP4R3CPQ6ZMV5 832 aa24.96■■□□□ 1.59
PDCD10-213ENST00000487678 HOXD11P31277 338 aaPredicted RBP24.41■■□□□ 1.5
PDCD10-213ENST00000487678 CNKSR2Q8WXI2 1034 aa24.4■■□□□ 1.5
PDCD10-213ENST00000487678 DCAF8L1A6NGE4 600 aa24.34■■□□□ 1.49
PDCD10-213ENST00000487678 RNF216Q9NWF9 866 aaPredicted RBP24.18■■□□□ 1.46
PDCD10-213ENST00000487678 CACNB1Q02641 598 aaPredicted RBP23.92■■□□□ 1.42
PDCD10-213ENST00000487678 NCBP3Q53F19 620 aaKnown RBP23.82■■□□□ 1.4
PDCD10-213ENST00000487678 RNF39Q9H2S5 420 aa23.81■■□□□ 1.4
PDCD10-213ENST00000487678 NPM3O75607 178 aaKnown RBP23.68■■□□□ 1.38
PDCD10-213ENST00000487678 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
PDCD10-213ENST00000487678 C1QBPQ07021 282 aaKnown RBP23.35■■□□□ 1.33
PDCD10-213ENST00000487678 KCNA4P22459 653 aa23.29■■□□□ 1.32
PDCD10-213ENST00000487678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.24■■□□□ 1.31
PDCD10-213ENST00000487678 U3KPZ7 1027 aaPredicted RBP22.85■■□□□ 1.25
PDCD10-213ENST00000487678 SLC4A2P04920 1241 aa22.68■■□□□ 1.22
PDCD10-213ENST00000487678 SPINK5Q9NQ38 1064 aaPredicted RBP22.58■■□□□ 1.21
PDCD10-213ENST00000487678 CAPN15O75808 1086 aa22.42■■□□□ 1.18
PDCD10-213ENST00000487678 DSG3P32926 999 aa22.32■■□□□ 1.16
PDCD10-213ENST00000487678 TRHP20396 242 aaPredicted RBP22.09■■□□□ 1.13
PDCD10-213ENST00000487678 ABCB7O75027 752 aa22■■□□□ 1.11
PDCD10-213ENST00000487678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.92■■□□□ 1.1
PDCD10-213ENST00000487678 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
PDCD10-213ENST00000487678 ZNF219Q9P2Y4 722 aaPredicted RBP21.89■■□□□ 1.09
PDCD10-213ENST00000487678 APLP2Q06481 763 aa21.87■■□□□ 1.09
PDCD10-213ENST00000487678 SAMD1Q6SPF0 538 aaPredicted RBP21.87■■□□□ 1.09
PDCD10-213ENST00000487678 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
PDCD10-213ENST00000487678 MYCNP04198 464 aaPredicted RBP21.78■■□□□ 1.08
PDCD10-213ENST00000487678 FOXD4L1Q9NU39 408 aa21.58■■□□□ 1.05
PDCD10-213ENST00000487678 ATF5Q9Y2D1 282 aaPredicted RBP21.53■■□□□ 1.04
PDCD10-213ENST00000487678 ZBTB22O15209 634 aa21.5■■□□□ 1.03
PDCD10-213ENST00000487678 POLA2Q14181 598 aa21.5■■□□□ 1.03
PDCD10-213ENST00000487678 POTEHQ6S545 545 aa21.34■■□□□ 1.01
PDCD10-213ENST00000487678 RBM42Q9BTD8 480 aaKnown RBP21.09■□□□□ 0.97
PDCD10-213ENST00000487678 OSCARQ8IYS5 282 aa20.84■□□□□ 0.93
PDCD10-213ENST00000487678 ZBTB12Q9Y330 459 aaPredicted RBP20.83■□□□□ 0.93
PDCD10-213ENST00000487678 ATXN8OSP0DMR3 200 aa20.82■□□□□ 0.92
PDCD10-213ENST00000487678 CHRDL2Q6WN34 429 aa20.79■□□□□ 0.92
PDCD10-213ENST00000487678 AKT1S1Q96B36 256 aa20.69■□□□□ 0.9
PDCD10-213ENST00000487678 REM2Q8IYK8 340 aaPredicted RBP20.6■□□□□ 0.89
PDCD10-213ENST00000487678 MKRN4PQ13434 485 aaPredicted RBP20.5■□□□□ 0.87
PDCD10-213ENST00000487678 CSRNP3Q8WYN3 585 aa20.43■□□□□ 0.86
PDCD10-213ENST00000487678 PITPNM1O00562 1244 aa20.42■□□□□ 0.86
PDCD10-213ENST00000487678 FBLN2P98095 1184 aa20.39■□□□□ 0.85
PDCD10-213ENST00000487678 PIP4P2Q8N4L2 257 aa20.36■□□□□ 0.85
PDCD10-213ENST00000487678 SPDYE2BA6NHP3 402 aa20.28■□□□□ 0.84
PDCD10-213ENST00000487678 SPDYE6P0CI01 402 aa20.28■□□□□ 0.84
PDCD10-213ENST00000487678 SPDYE2Q495Y8 402 aa20.28■□□□□ 0.84
PDCD10-213ENST00000487678 FXR2P51116 673 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDCD10-213ENST00000487678 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
PDCD10-213ENST00000487678 ZNF692Q9BU19 519 aaPredicted RBP20.1■□□□□ 0.81
PDCD10-213ENST00000487678 SSUH2Q9Y2M2 353 aa20.09■□□□□ 0.81
PDCD10-213ENST00000487678 CLEC11AQ9Y240 323 aa20■□□□□ 0.79
PDCD10-213ENST00000487678 SP7Q8TDD2 431 aaPredicted RBP19.98■□□□□ 0.79
PDCD10-213ENST00000487678 HAX1O00165 279 aa19.93■□□□□ 0.78
PDCD10-213ENST00000487678 SPDYE1Q8NFV5 336 aaPredicted RBP19.92■□□□□ 0.78
PDCD10-213ENST00000487678 EVX2Q03828 476 aa19.88■□□□□ 0.77
PDCD10-213ENST00000487678 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
PDCD10-213ENST00000487678 PRKAR2AP13861 404 aaKnown RBP19.85■□□□□ 0.77
PDCD10-213ENST00000487678 CHADLQ6NUI6 762 aa19.72■□□□□ 0.75
PDCD10-213ENST00000487678 PRR29P0C7W0 189 aa19.61■□□□□ 0.73
PDCD10-213ENST00000487678 C19orf67A6NJJ6 358 aa19.55■□□□□ 0.72
PDCD10-213ENST00000487678 SPDYE4A6NLX3 237 aa19.4■□□□□ 0.7
PDCD10-213ENST00000487678 FARP1Q9Y4F1 1045 aaPredicted RBP19.32■□□□□ 0.68
PDCD10-213ENST00000487678 GABBR2O75899 941 aa19.29■□□□□ 0.68
PDCD10-213ENST00000487678 CREBZFQ9NS37 354 aa19.23■□□□□ 0.67
PDCD10-213ENST00000487678 CD44P16070 742 aaKnown RBP19.2■□□□□ 0.66
PDCD10-213ENST00000487678 STAG3Q9UJ98 1225 aa19.12■□□□□ 0.65
PDCD10-213ENST00000487678 POTEIP0CG38 1075 aa18.98■□□□□ 0.63
PDCD10-213ENST00000487678 PROM2Q8N271 834 aa18.94■□□□□ 0.62
PDCD10-213ENST00000487678 ZRANB1Q9UGI0 708 aa18.94■□□□□ 0.62
PDCD10-213ENST00000487678 MNX1P50219 401 aaPredicted RBP18.93■□□□□ 0.62
PDCD10-213ENST00000487678 ZNF579Q8NAF0 562 aaKnown RBP18.87■□□□□ 0.61
PDCD10-213ENST00000487678 GALR2O43603 387 aaPredicted RBP18.76■□□□□ 0.59
PDCD10-213ENST00000487678 PHF12Q96QT6 1004 aa18.76■□□□□ 0.59
PDCD10-213ENST00000487678 LHX8Q68G74 356 aa18.75■□□□□ 0.59
PDCD10-213ENST00000487678 NPM1P06748 294 aaKnown RBP eCLIP18.68■□□□□ 0.58
PDCD10-213ENST00000487678 CLCN6P51797 869 aa18.68■□□□□ 0.58
PDCD10-213ENST00000487678 DCBLD2Q96PD2 775 aa18.67■□□□□ 0.58
PDCD10-213ENST00000487678 PAK3O75914 559 aaPredicted RBP18.62■□□□□ 0.57
PDCD10-213ENST00000487678 TSPYL2Q9H2G4 693 aaPredicted RBP18.52■□□□□ 0.56
PDCD10-213ENST00000487678 MIER1Q8N108 512 aa18.49■□□□□ 0.55
PDCD10-213ENST00000487678 FKBP8Q14318 412 aa18.47■□□□□ 0.55
PDCD10-213ENST00000487678 MS4A3Q96HJ5 214 aa18.47■□□□□ 0.55
PDCD10-213ENST00000487678 PELP1Q8IZL8 1130 aaKnown RBP18.46■□□□□ 0.55
PDCD10-213ENST00000487678 CCDC61Q9Y6R9 512 aa18.43■□□□□ 0.54
PDCD10-213ENST00000487678 RASEFQ8IZ41 740 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms