RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 DCAF8L2P0C7V8 631 aa24.64■■□□□ 1.53
TFAM-204ENST00000487519 SUPT5HO00267 1087 aaKnown RBP23.22■■□□□ 1.31
TFAM-204ENST00000487519 SHROOM4Q9ULL8 1493 aa22.78■■□□□ 1.24
TFAM-204ENST00000487519 NISCHQ9Y2I1 1504 aa22.73■■□□□ 1.23
TFAM-204ENST00000487519 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
TFAM-204ENST00000487519 APLP2Q06481 763 aa22.07■■□□□ 1.12
TFAM-204ENST00000487519 FAM9AQ8IZU1 332 aaPredicted RBP21.99■■□□□ 1.11
TFAM-204ENST00000487519 TTBK1Q5TCY1 1321 aaPredicted RBP21.9■■□□□ 1.1
TFAM-204ENST00000487519 PELP1Q8IZL8 1130 aaKnown RBP21.79■■□□□ 1.08
TFAM-204ENST00000487519 RANGAP1P46060 587 aaPredicted RBP21.7■■□□□ 1.06
TFAM-204ENST00000487519 PCGF6Q9BYE7 350 aa21.56■■□□□ 1.04
TFAM-204ENST00000487519 ATP1B4Q9UN42 357 aaPredicted RBP21.48■■□□□ 1.03
TFAM-204ENST00000487519 TRIM41Q8WV44 630 aa21.4■■□□□ 1.02
TFAM-204ENST00000487519 UBTFP17480 764 aaKnown RBP21.26■□□□□ 0.99
TFAM-204ENST00000487519 CCER1Q8TC90 406 aaPredicted RBP21.24■□□□□ 0.99
TFAM-204ENST00000487519 CENPBP07199 599 aaPredicted RBP21.05■□□□□ 0.96
TFAM-204ENST00000487519 ZEB1P37275 1124 aaPredicted RBP21■□□□□ 0.95
TFAM-204ENST00000487519 ERICH6Q7L0X2 663 aa20.99■□□□□ 0.95
TFAM-204ENST00000487519 PPARGC1BQ86YN6 1023 aaKnown RBP20.98■□□□□ 0.95
TFAM-204ENST00000487519 YTHDC1Q96MU7 727 aaKnown RBP20.85■□□□□ 0.93
TFAM-204ENST00000487519 NEFLP07196 543 aa20.75■□□□□ 0.91
TFAM-204ENST00000487519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
TFAM-204ENST00000487519 HNRNPUL2Q1KMD3 747 aaKnown RBP20.71■□□□□ 0.91
TFAM-204ENST00000487519 MYT1LQ9UL68 1186 aa20.71■□□□□ 0.91
TFAM-204ENST00000487519 ITGAEP38570 1179 aa20.7■□□□□ 0.9
TFAM-204ENST00000487519 POLR3GLQ9BT43 218 aa20.58■□□□□ 0.89
TFAM-204ENST00000487519 TRIM26Q12899 539 aaPredicted RBP20.49■□□□□ 0.87
TFAM-204ENST00000487519 LOC105371045A0A1W2PR82 267 aa20.46■□□□□ 0.87
TFAM-204ENST00000487519 CNGB1Q14028 1251 aaPredicted RBP20.45■□□□□ 0.86
TFAM-204ENST00000487519 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
TFAM-204ENST00000487519 HRCP23327 699 aa20.27■□□□□ 0.83
TFAM-204ENST00000487519 SLC4A1APQ9BWU0 796 aaKnown RBP20.22■□□□□ 0.83
TFAM-204ENST00000487519 DAXXQ9UER7 740 aaPredicted RBP20.18■□□□□ 0.82
TFAM-204ENST00000487519 PABPN1Q86U42 306 aaKnown RBP eCLIP20.16■□□□□ 0.82
TFAM-204ENST00000487519 FAM50AQ14320 339 aaKnown RBP20.08■□□□□ 0.8
TFAM-204ENST00000487519 ABCC9O60706 1549 aa20.01■□□□□ 0.79
TFAM-204ENST00000487519 TRIM52Q96A61 297 aa19.99■□□□□ 0.79
TFAM-204ENST00000487519 MYT1Q01538 1121 aa19.91■□□□□ 0.78
TFAM-204ENST00000487519 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
TFAM-204ENST00000487519 FBLN2P98095 1184 aa19.89■□□□□ 0.78
TFAM-204ENST00000487519 CLSPNQ9HAW4 1339 aa19.87■□□□□ 0.77
TFAM-204ENST00000487519 DIEXFQ68CQ4 756 aaKnown RBP19.85■□□□□ 0.77
TFAM-204ENST00000487519 ZNF326Q5BKZ1 582 aaKnown RBP19.84■□□□□ 0.77
TFAM-204ENST00000487519 ARID3CA6NKF2 412 aa19.72■□□□□ 0.75
TFAM-204ENST00000487519 ZNF316A6NFI3 1004 aaPredicted RBP19.71■□□□□ 0.75
TFAM-204ENST00000487519 P3H3Q8IVL6 736 aa19.66■□□□□ 0.74
TFAM-204ENST00000487519 BCANQ96GW7 911 aa19.62■□□□□ 0.73
TFAM-204ENST00000487519 RTL5Q5HYW3 569 aaPredicted RBP19.61■□□□□ 0.73
TFAM-204ENST00000487519 SLC24A1O60721 1099 aa19.56■□□□□ 0.72
TFAM-204ENST00000487519 ANP32CO43423 234 aa19.56■□□□□ 0.72
TFAM-204ENST00000487519 BCL11AQ9H165 835 aa19.55■□□□□ 0.72
TFAM-204ENST00000487519 ZNF777Q9ULD5 760 aaPredicted RBP19.51■□□□□ 0.71
TFAM-204ENST00000487519 ZBTB47Q9UFB7 747 aaPredicted RBP19.48■□□□□ 0.71
TFAM-204ENST00000487519 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
TFAM-204ENST00000487519 CANXP27824 592 aaKnown RBP19.41■□□□□ 0.7
TFAM-204ENST00000487519 GTF3C3Q9Y5Q9 886 aa19.38■□□□□ 0.69
TFAM-204ENST00000487519 NEFMP07197 916 aa19.36■□□□□ 0.69
TFAM-204ENST00000487519 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
TFAM-204ENST00000487519 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
TFAM-204ENST00000487519 ESF1Q9H501 851 aaKnown RBP19.28■□□□□ 0.68
TFAM-204ENST00000487519 CHGAP10645 457 aaKnown RBP19.27■□□□□ 0.68
TFAM-204ENST00000487519 STAG3Q9UJ98 1225 aa19.21■□□□□ 0.67
TFAM-204ENST00000487519 NPM1P06748 294 aaKnown RBP eCLIP19.14■□□□□ 0.65
TFAM-204ENST00000487519 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
TFAM-204ENST00000487519 TONSLQ96HA7 1378 aa19.1■□□□□ 0.65
TFAM-204ENST00000487519 CHIC2Q9UKJ5 165 aa19.1■□□□□ 0.65
TFAM-204ENST00000487519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.654e-10■□□□□ 10.3
TFAM-204ENST00000487519 NPM2Q86SE8 214 aaKnown RBP19.07■□□□□ 0.64
TFAM-204ENST00000487519 SALL2Q9Y467 1007 aaPredicted RBP19.05■□□□□ 0.64
TFAM-204ENST00000487519 DDX10Q13206 875 aaKnown RBP19.01■□□□□ 0.63
TFAM-204ENST00000487519 FAM9BQ8IZU0 186 aa19.01■□□□□ 0.63
TFAM-204ENST00000487519 ANP32AP39687 249 aaKnown RBP19■□□□□ 0.63
TFAM-204ENST00000487519 ACIN1Q9UKV3 1341 aaKnown RBP18.99■□□□□ 0.63
TFAM-204ENST00000487519 HNRNPUQ00839 825 aaKnown RBP eCLIP18.99■□□□□ 0.63
TFAM-204ENST00000487519 FKBP8Q14318 412 aa18.95■□□□□ 0.62
TFAM-204ENST00000487519 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
TFAM-204ENST00000487519 TSPY4P0CV99 314 aa18.91■□□□□ 0.62
TFAM-204ENST00000487519 TSPY10P0CW01 314 aa18.91■□□□□ 0.62
TFAM-204ENST00000487519 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
TFAM-204ENST00000487519 CHMP7Q8WUX9 453 aaPredicted RBP18.89■□□□□ 0.62
TFAM-204ENST00000487519 HSP90AA1P07900 732 aaKnown RBP18.89■□□□□ 0.61
TFAM-204ENST00000487519 TMC1Q8TDI8 760 aa18.87■□□□□ 0.61
TFAM-204ENST00000487519 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
TFAM-204ENST00000487519 MTUS2Q5JR59 1369 aa18.84■□□□□ 0.61
TFAM-204ENST00000487519 PLEKHG5O94827 1062 aa18.82■□□□□ 0.6
TFAM-204ENST00000487519 HIRIP3Q9BW71 556 aaPredicted RBP18.81■□□□□ 0.6
TFAM-204ENST00000487519 WDR43Q15061 677 aaKnown RBP eCLIP18.79■□□□□ 0.6
TFAM-204ENST00000487519 KCNH8Q96L42 1107 aa18.79■□□□□ 0.6
TFAM-204ENST00000487519 UPF2Q9HAU5 1272 aaKnown RBP18.79■□□□□ 0.6
TFAM-204ENST00000487519 A0A0G2JS52 829 aa18.78■□□□□ 0.6
TFAM-204ENST00000487519 MRS2Q9HD23 443 aa18.77■□□□□ 0.6
TFAM-204ENST00000487519 RRP7BPQ9NSQ0 103 aa18.76■□□□□ 0.59
TFAM-204ENST00000487519 CCDC136Q96JN2 1154 aa18.74■□□□□ 0.59
TFAM-204ENST00000487519 ZBTB7CA1YPR0 619 aa18.73■□□□□ 0.59
TFAM-204ENST00000487519 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.72■□□□□ 0.59
TFAM-204ENST00000487519 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
TFAM-204ENST00000487519 ANP32BQ92688 251 aaKnown RBP18.71■□□□□ 0.58
TFAM-204ENST00000487519 C14orf37Q86TY3 774 aa18.69■□□□□ 0.58
TFAM-204ENST00000487519 PPP1R15AO75807 674 aaPredicted RBP18.68■□□□□ 0.58
TFAM-204ENST00000487519 CLIP1P30622 1438 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms