RNA–Protein interactions for RNA: ENST00000487003.5

RAB3GAP1-204, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 3,506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-204ENST00000487003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.99□□□□□ -1.452e-6■■■■■ 154
RAB3GAP1-204ENST00000487003 SF3B1O75533 1304 aaKnown RBP eCLIP5.67□□□□□ -1.54e-6■■■■■ 67.2
RAB3GAP1-204ENST00000487003 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.46□□□□□ -1.542e-7■■■■■ 62.8
RAB3GAP1-204ENST00000487003 PCBP2Q15366 365 aaKnown RBP eCLIP5.16□□□□□ -1.585e-15■■■■■ 52.1
RAB3GAP1-204ENST00000487003 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.71□□□□□ -1.52e-8■■■■■ 39.5
RAB3GAP1-204ENST00000487003 QKIQ96PU8 341 aaKnown RBP eCLIP5.39□□□□□ -1.551e-6■■■■■ 38.3
RAB3GAP1-204ENST00000487003 PTBP1P26599 531 aaKnown RBP eCLIP4.4□□□□□ -1.714e-10■■■■■ 37.6
RAB3GAP1-204ENST00000487003 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.49□□□□□ -1.534e-9■■■■■ 34.7
RAB3GAP1-204ENST00000487003 DKC1O60832 514 aaKnown RBP eCLIP5.96□□□□□ -1.452e-25■■■■■ 27.4
RAB3GAP1-204ENST00000487003 HNRNPMP52272 730 aaKnown RBP eCLIP7.84□□□□□ -1.152e-7■■■■■ 27
RAB3GAP1-204ENST00000487003 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.02□□□□□ -1.611e-8■■■■■ 26.9
RAB3GAP1-204ENST00000487003 SF3A3Q12874 501 aaKnown RBP eCLIP5.49□□□□□ -1.534e-6■■■■□ 22.2
RAB3GAP1-204ENST00000487003 HNRNPLP14866 589 aaKnown RBP eCLIP5.27□□□□□ -1.574e-7■■■■□ 21.7
RAB3GAP1-204ENST00000487003 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.73□□□□□ -1.657e-7■■■■□ 21.1
RAB3GAP1-204ENST00000487003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.65□□□□□ -1.518e-10■■■■□ 19.7
RAB3GAP1-204ENST00000487003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.71□□□□□ -1.491e-6■■■■□ 19.6
RAB3GAP1-204ENST00000487003 IGF2BP3O00425 579 aaKnown RBP eCLIP5.99□□□□□ -1.454e-6■■■■□ 19.3
RAB3GAP1-204ENST00000487003 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.41□□□□□ -1.546e-9■■■□□ 19.1
RAB3GAP1-204ENST00000487003 SF3B4Q15427 424 aaKnown RBP eCLIP4.83□□□□□ -1.643e-6■■■□□ 19
RAB3GAP1-204ENST00000487003 UPF1Q92900 1129 aaKnown RBP eCLIP6.48□□□□□ -1.374e-8■■■□□ 19
RAB3GAP1-204ENST00000487003 U2AF2P26368 475 aaKnown RBP eCLIP5.93□□□□□ -1.464e-7■■■□□ 18.9
RAB3GAP1-204ENST00000487003 FXR2P51116 673 aaKnown RBP eCLIP5.86□□□□□ -1.476e-8■■■□□ 16.9
RAB3GAP1-204ENST00000487003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.65□□□□□ -1.344e-7■■■□□ 15.8
RAB3GAP1-204ENST00000487003 KHSRPQ92945 711 aaKnown RBP eCLIP5.47□□□□□ -1.537e-8■■■□□ 15.5
RAB3GAP1-204ENST00000487003 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.94□□□□□ -1.624e-6■■■□□ 15.4
RAB3GAP1-204ENST00000487003 PPIGQ13427 754 aaKnown RBP eCLIP5.73□□□□□ -1.492e-6■■■□□ 15.1
RAB3GAP1-204ENST00000487003 TRA2AQ13595 282 aaKnown RBP eCLIP5.01□□□□□ -1.615e-6■■■□□ 14.9
RAB3GAP1-204ENST00000487003 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.69□□□□□ -1.52e-8■■□□□ 13.3
RAB3GAP1-204ENST00000487003 PABPC4Q13310 644 aaKnown RBP eCLIP6.14□□□□□ -1.436e-12■■□□□ 13.3
RAB3GAP1-204ENST00000487003 RBM15Q96T37 977 aaKnown RBP eCLIP5.47□□□□□ -1.537e-7■■□□□ 13
RAB3GAP1-204ENST00000487003 SUB1P53999 127 aaKnown RBP eCLIP4.37□□□□□ -1.711e-6■■□□□ 12.7
RAB3GAP1-204ENST00000487003 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.79□□□□□ -1.481e-6■■□□□ 12.6
RAB3GAP1-204ENST00000487003 TARDBPQ13148 414 aaKnown RBP eCLIP5.1□□□□□ -1.592e-6■■□□□ 12.4
RAB3GAP1-204ENST00000487003 ZNF622Q969S3 477 aaKnown RBP eCLIP6.67□□□□□ -1.347e-7■■□□□ 12.3
RAB3GAP1-204ENST00000487003 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.61□□□□□ -1.512e-6■■□□□ 11.7
RAB3GAP1-204ENST00000487003 AQRO60306 1485 aaKnown RBP eCLIP8.24□□□□□ -1.091e-6■■□□□ 11.4
RAB3GAP1-204ENST00000487003 TIAL1Q01085 375 aaKnown RBP eCLIP5.07□□□□□ -1.62e-8■□□□□ 11.1
RAB3GAP1-204ENST00000487003 SND1Q7KZF4 910 aaKnown RBP eCLIP5.68□□□□□ -1.55e-7■□□□□ 10.8
RAB3GAP1-204ENST00000487003 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.24□□□□□ -1.573e-6■□□□□ 9.5
RAB3GAP1-204ENST00000487003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.93□□□□□ -1.143e-6■□□□□ 8.7
RAB3GAP1-204ENST00000487003 EIF3DO15371 548 aaKnown RBP eCLIP5.75□□□□□ -1.491e-7■□□□□ 8.6
RAB3GAP1-204ENST00000487003 G3BP1Q13283 466 aaKnown RBP eCLIP6.66□□□□□ -1.348e-7■□□□□ 8.4
RAB3GAP1-204ENST00000487003 TIA1P31483 386 aaKnown RBP eCLIP5.09□□□□□ -1.62e-7■□□□□ 8
Retrieved 43 of 43 RNA–protein pairs in 24.5 ms