RNA–Protein interactions for RNA: ENST00000485656.1

AC041039.1-201, humanhuman

BASIC

Gene AC041039.1, Length 536 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC041039.1-201ENST00000485656 AEBP2Q6ZN18 517 aaPredicted RBP26.1■■□□□ 1.77
AC041039.1-201ENST00000485656 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
AC041039.1-201ENST00000485656 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
AC041039.1-201ENST00000485656 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
AC041039.1-201ENST00000485656 FOXD1Q16676 465 aa20.8■□□□□ 0.92
AC041039.1-201ENST00000485656 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
AC041039.1-201ENST00000485656 MSH5O43196 834 aa19.55■□□□□ 0.72
AC041039.1-201ENST00000485656 PIAS4Q8N2W9 510 aaPredicted RBP19.44■□□□□ 0.7
AC041039.1-201ENST00000485656 PPP6R1Q9UPN7 881 aa19.35■□□□□ 0.69
AC041039.1-201ENST00000485656 ADRA2BP18089 450 aa19.3■□□□□ 0.68
AC041039.1-201ENST00000485656 POTEDQ86YR6 584 aa19.25■□□□□ 0.67
AC041039.1-201ENST00000485656 MAPK8IP2Q13387 824 aaPredicted RBP17.75■□□□□ 0.43
AC041039.1-201ENST00000485656 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
AC041039.1-201ENST00000485656 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
AC041039.1-201ENST00000485656 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
AC041039.1-201ENST00000485656 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
AC041039.1-201ENST00000485656 HOXD11P31277 338 aaPredicted RBP16.96■□□□□ 0.31
AC041039.1-201ENST00000485656 CNKSR2Q8WXI2 1034 aa16.96■□□□□ 0.31
AC041039.1-201ENST00000485656 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
AC041039.1-201ENST00000485656 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
AC041039.1-201ENST00000485656 RNF39Q9H2S5 420 aa16.65■□□□□ 0.26
AC041039.1-201ENST00000485656 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
AC041039.1-201ENST00000485656 C1QBPQ07021 282 aaKnown RBP16.42■□□□□ 0.22
AC041039.1-201ENST00000485656 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
AC041039.1-201ENST00000485656 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
AC041039.1-201ENST00000485656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
AC041039.1-201ENST00000485656 KCNA4P22459 653 aa15.88■□□□□ 0.13
AC041039.1-201ENST00000485656 U3KPZ7 1027 aaPredicted RBP15.82■□□□□ 0.12
AC041039.1-201ENST00000485656 CAPN15O75808 1086 aa15.65■□□□□ 0.1
AC041039.1-201ENST00000485656 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
AC041039.1-201ENST00000485656 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
AC041039.1-201ENST00000485656 DSG3P32926 999 aa15.55■□□□□ 0.08
AC041039.1-201ENST00000485656 APLP2Q06481 763 aa15.43■□□□□ 0.06
AC041039.1-201ENST00000485656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
AC041039.1-201ENST00000485656 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
AC041039.1-201ENST00000485656 TRHP20396 242 aaPredicted RBP15.37■□□□□ 0.05
AC041039.1-201ENST00000485656 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
AC041039.1-201ENST00000485656 SAMD1Q6SPF0 538 aaPredicted RBP15.28■□□□□ 0.04
AC041039.1-201ENST00000485656 ABCB7O75027 752 aa15.26■□□□□ 0.03
AC041039.1-201ENST00000485656 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
AC041039.1-201ENST00000485656 POTEHQ6S545 545 aa15.09■□□□□ 0.01
AC041039.1-201ENST00000485656 SLC4A1APQ9BWU0 796 aaKnown RBP14.99□□□□□ -0.01
AC041039.1-201ENST00000485656 POLA2Q14181 598 aa14.92□□□□□ -0.02
AC041039.1-201ENST00000485656 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
AC041039.1-201ENST00000485656 FOXD4L1Q9NU39 408 aa14.87□□□□□ -0.03
AC041039.1-201ENST00000485656 ATF5Q9Y2D1 282 aaPredicted RBP14.72□□□□□ -0.05
AC041039.1-201ENST00000485656 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
AC041039.1-201ENST00000485656 CHRDL2Q6WN34 429 aa14.59□□□□□ -0.07
AC041039.1-201ENST00000485656 ZBTB22O15209 634 aa14.57□□□□□ -0.08
AC041039.1-201ENST00000485656 AKT1S1Q96B36 256 aa14.5□□□□□ -0.09
AC041039.1-201ENST00000485656 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
AC041039.1-201ENST00000485656 ATXN8OSP0DMR3 200 aa14.43□□□□□ -0.1
AC041039.1-201ENST00000485656 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
AC041039.1-201ENST00000485656 FBLN2P98095 1184 aa14.23□□□□□ -0.13
AC041039.1-201ENST00000485656 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
AC041039.1-201ENST00000485656 PITPNM1O00562 1244 aa14.19□□□□□ -0.14
AC041039.1-201ENST00000485656 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
AC041039.1-201ENST00000485656 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
AC041039.1-201ENST00000485656 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
AC041039.1-201ENST00000485656 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
AC041039.1-201ENST00000485656 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
AC041039.1-201ENST00000485656 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
AC041039.1-201ENST00000485656 HAX1O00165 279 aa14.01□□□□□ -0.17
AC041039.1-201ENST00000485656 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
AC041039.1-201ENST00000485656 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
AC041039.1-201ENST00000485656 CLEC11AQ9Y240 323 aa13.93□□□□□ -0.18
AC041039.1-201ENST00000485656 SSUH2Q9Y2M2 353 aa13.92□□□□□ -0.18
AC041039.1-201ENST00000485656 PRKAR2AP13861 404 aaKnown RBP13.84□□□□□ -0.19
AC041039.1-201ENST00000485656 CSRNP3Q8WYN3 585 aa13.81□□□□□ -0.2
AC041039.1-201ENST00000485656 EVX2Q03828 476 aa13.76□□□□□ -0.21
AC041039.1-201ENST00000485656 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
AC041039.1-201ENST00000485656 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
AC041039.1-201ENST00000485656 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
AC041039.1-201ENST00000485656 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
AC041039.1-201ENST00000485656 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
AC041039.1-201ENST00000485656 GABBR2O75899 941 aa13.47□□□□□ -0.25
AC041039.1-201ENST00000485656 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
AC041039.1-201ENST00000485656 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
AC041039.1-201ENST00000485656 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
AC041039.1-201ENST00000485656 SPDYE4A6NLX3 237 aa13.36□□□□□ -0.27
AC041039.1-201ENST00000485656 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
AC041039.1-201ENST00000485656 CLCN6P51797 869 aa13.26□□□□□ -0.29
AC041039.1-201ENST00000485656 LHX8Q68G74 356 aa13.21□□□□□ -0.29
AC041039.1-201ENST00000485656 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
AC041039.1-201ENST00000485656 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
AC041039.1-201ENST00000485656 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
AC041039.1-201ENST00000485656 DCBLD2Q96PD2 775 aa13.14□□□□□ -0.31
AC041039.1-201ENST00000485656 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
AC041039.1-201ENST00000485656 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
AC041039.1-201ENST00000485656 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
AC041039.1-201ENST00000485656 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
AC041039.1-201ENST00000485656 PHF12Q96QT6 1004 aa12.99□□□□□ -0.33
AC041039.1-201ENST00000485656 PROM2Q8N271 834 aa12.97□□□□□ -0.33
AC041039.1-201ENST00000485656 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
AC041039.1-201ENST00000485656 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
AC041039.1-201ENST00000485656 MS4A3Q96HJ5 214 aa12.81□□□□□ -0.36
AC041039.1-201ENST00000485656 MIER1Q8N108 512 aa12.78□□□□□ -0.36
AC041039.1-201ENST00000485656 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
AC041039.1-201ENST00000485656 ASTLQ6HA08 431 aaPredicted RBP12.74□□□□□ -0.37
AC041039.1-201ENST00000485656 CCDC61Q9Y6R9 512 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms