RNA–Protein interactions for RNA: ENST00000485421.1

TSC22D2-205, Transcript of TSC22 domain family member 2, humanhuman

TSL 1 (best)

Gene TSC22D2, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D2-205ENST00000485421 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
TSC22D2-205ENST00000485421 CHIC1Q5VXU3 224 aa19.2■□□□□ 0.66
TSC22D2-205ENST00000485421 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
TSC22D2-205ENST00000485421 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
TSC22D2-205ENST00000485421 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
TSC22D2-205ENST00000485421 PLPPR3Q6T4P5 718 aa15.72■□□□□ 0.11
TSC22D2-205ENST00000485421 FOXD1Q16676 465 aa15.15■□□□□ 0.02
TSC22D2-205ENST00000485421 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
TSC22D2-205ENST00000485421 ADRA2BP18089 450 aa14.85□□□□□ -0.03
TSC22D2-205ENST00000485421 MSH5O43196 834 aa14.73□□□□□ -0.05
TSC22D2-205ENST00000485421 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
TSC22D2-205ENST00000485421 KCNA4P22459 653 aa14.13□□□□□ -0.15
TSC22D2-205ENST00000485421 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
TSC22D2-205ENST00000485421 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
TSC22D2-205ENST00000485421 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
TSC22D2-205ENST00000485421 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
TSC22D2-205ENST00000485421 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
TSC22D2-205ENST00000485421 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
TSC22D2-205ENST00000485421 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
TSC22D2-205ENST00000485421 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
TSC22D2-205ENST00000485421 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
TSC22D2-205ENST00000485421 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
TSC22D2-205ENST00000485421 DNAJC5BQ9UF47 199 aa13.09□□□□□ -0.31
TSC22D2-205ENST00000485421 RNF216Q9NWF9 866 aaPredicted RBP13.08□□□□□ -0.32
TSC22D2-205ENST00000485421 ZBTB22O15209 634 aa13.06□□□□□ -0.32
TSC22D2-205ENST00000485421 DMRT2Q9Y5R5 561 aa13.03□□□□□ -0.32
TSC22D2-205ENST00000485421 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
TSC22D2-205ENST00000485421 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
TSC22D2-205ENST00000485421 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
TSC22D2-205ENST00000485421 POTEHQ6S545 545 aa12.52□□□□□ -0.41
TSC22D2-205ENST00000485421 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
TSC22D2-205ENST00000485421 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
TSC22D2-205ENST00000485421 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
TSC22D2-205ENST00000485421 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
TSC22D2-205ENST00000485421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.26□□□□□ -0.45
TSC22D2-205ENST00000485421 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
TSC22D2-205ENST00000485421 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
TSC22D2-205ENST00000485421 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
TSC22D2-205ENST00000485421 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
TSC22D2-205ENST00000485421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.05□□□□□ -0.48
TSC22D2-205ENST00000485421 HNRNPUL2Q1KMD3 747 aaKnown RBP12.05□□□□□ -0.48
TSC22D2-205ENST00000485421 FKBP8Q14318 412 aa11.93□□□□□ -0.5
TSC22D2-205ENST00000485421 ZNF219Q9P2Y4 722 aaPredicted RBP11.86□□□□□ -0.51
TSC22D2-205ENST00000485421 APLP2Q06481 763 aa11.78□□□□□ -0.52
TSC22D2-205ENST00000485421 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
TSC22D2-205ENST00000485421 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
TSC22D2-205ENST00000485421 TRHP20396 242 aaPredicted RBP11.64□□□□□ -0.55
TSC22D2-205ENST00000485421 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
TSC22D2-205ENST00000485421 CAPN15O75808 1086 aa11.58□□□□□ -0.56
TSC22D2-205ENST00000485421 POLA2Q14181 598 aa11.58□□□□□ -0.56
TSC22D2-205ENST00000485421 AMER1Q5JTC6 1135 aaPredicted RBP11.57□□□□□ -0.56
TSC22D2-205ENST00000485421 SPDYE4A6NLX3 237 aa11.51□□□□□ -0.57
TSC22D2-205ENST00000485421 FBLN2P98095 1184 aa11.47□□□□□ -0.57
TSC22D2-205ENST00000485421 PROM2Q8N271 834 aa11.46□□□□□ -0.57
TSC22D2-205ENST00000485421 ABCB7O75027 752 aa11.43□□□□□ -0.58
TSC22D2-205ENST00000485421 DSG3P32926 999 aa11.37□□□□□ -0.59
TSC22D2-205ENST00000485421 ZBTB12Q9Y330 459 aaPredicted RBP11.33□□□□□ -0.6
TSC22D2-205ENST00000485421 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
TSC22D2-205ENST00000485421 VASPP50552 380 aaPredicted RBP11.21□□□□□ -0.61
TSC22D2-205ENST00000485421 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.61
TSC22D2-205ENST00000485421 IFNLR1Q8IU57 520 aaPredicted RBP11.16□□□□□ -0.62
TSC22D2-205ENST00000485421 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
TSC22D2-205ENST00000485421 ZNF692Q9BU19 519 aaPredicted RBP11.14□□□□□ -0.63
TSC22D2-205ENST00000485421 SLC24A1O60721 1099 aa11.13□□□□□ -0.63
TSC22D2-205ENST00000485421 SSUH2Q9Y2M2 353 aa11.12□□□□□ -0.63
TSC22D2-205ENST00000485421 SPDYE2BA6NHP3 402 aa11.11□□□□□ -0.63
TSC22D2-205ENST00000485421 SPDYE6P0CI01 402 aa11.11□□□□□ -0.63
TSC22D2-205ENST00000485421 SPDYE2Q495Y8 402 aa11.11□□□□□ -0.63
TSC22D2-205ENST00000485421 NISCHQ9Y2I1 1504 aa11.05□□□□□ -0.64
TSC22D2-205ENST00000485421 PABPN1Q86U42 306 aaKnown RBP eCLIP11.02□□□□□ -0.65
TSC22D2-205ENST00000485421 CHRDL2Q6WN34 429 aa10.98□□□□□ -0.65
TSC22D2-205ENST00000485421 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
TSC22D2-205ENST00000485421 PKD2Q13563 968 aa10.96□□□□□ -0.65
TSC22D2-205ENST00000485421 KLHL34Q8N239 644 aa10.88□□□□□ -0.67
TSC22D2-205ENST00000485421 SPOCK2Q92563 424 aa10.88□□□□□ -0.67
TSC22D2-205ENST00000485421 MIER1Q8N108 512 aa10.85□□□□□ -0.67
TSC22D2-205ENST00000485421 PLCD3Q8N3E9 789 aa10.85□□□□□ -0.67
TSC22D2-205ENST00000485421 RBM42Q9BTD8 480 aaKnown RBP10.85□□□□□ -0.67
TSC22D2-205ENST00000485421 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
TSC22D2-205ENST00000485421 PLCB2Q00722 1185 aa10.73□□□□□ -0.69
TSC22D2-205ENST00000485421 ECM2O94769 699 aaPredicted RBP10.72□□□□□ -0.69
TSC22D2-205ENST00000485421 AKT1S1Q96B36 256 aa10.72□□□□□ -0.69
TSC22D2-205ENST00000485421 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
TSC22D2-205ENST00000485421 RGL2O15211 777 aa10.67□□□□□ -0.7
TSC22D2-205ENST00000485421 NPM1P06748 294 aaKnown RBP eCLIP10.67□□□□□ -0.7
TSC22D2-205ENST00000485421 SPDYE1Q8NFV5 336 aaPredicted RBP10.66□□□□□ -0.7
TSC22D2-205ENST00000485421 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
TSC22D2-205ENST00000485421 PLEKHG5O94827 1062 aa10.65□□□□□ -0.7
TSC22D2-205ENST00000485421 REM2Q8IYK8 340 aaPredicted RBP10.65□□□□□ -0.7
TSC22D2-205ENST00000485421 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
TSC22D2-205ENST00000485421 HAX1O00165 279 aa10.61□□□□□ -0.71
TSC22D2-205ENST00000485421 NUBP1P53384 320 aa10.61□□□□□ -0.71
TSC22D2-205ENST00000485421 CREBZFQ9NS37 354 aa10.61□□□□□ -0.71
TSC22D2-205ENST00000485421 CLEC11AQ9Y240 323 aa10.6□□□□□ -0.71
TSC22D2-205ENST00000485421 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
TSC22D2-205ENST00000485421 BBXQ8WY36 941 aaPredicted RBP10.58□□□□□ -0.72
TSC22D2-205ENST00000485421 PRR29P0C7W0 189 aa10.57□□□□□ -0.72
TSC22D2-205ENST00000485421 HAP1P54257 671 aaPredicted RBP10.53□□□□□ -0.72
TSC22D2-205ENST00000485421 PITPNM1O00562 1244 aa10.52□□□□□ -0.73
TSC22D2-205ENST00000485421 TRIM41Q8WV44 630 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms