RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
XPA-203ENST00000485042 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
XPA-203ENST00000485042 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
XPA-203ENST00000485042 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
XPA-203ENST00000485042 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
XPA-203ENST00000485042 FOXD1Q16676 465 aa15.95■□□□□ 0.14
XPA-203ENST00000485042 MSH5O43196 834 aa15.1■□□□□ 0.01
XPA-203ENST00000485042 PIAS4Q8N2W9 510 aaPredicted RBP14.8□□□□□ -0.04
XPA-203ENST00000485042 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
XPA-203ENST00000485042 PPP6R1Q9UPN7 881 aa14.59□□□□□ -0.07
XPA-203ENST00000485042 ADRA2BP18089 450 aa14.52□□□□□ -0.09
XPA-203ENST00000485042 DMRT2Q9Y5R5 561 aa13.47□□□□□ -0.25
XPA-203ENST00000485042 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
XPA-203ENST00000485042 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.28
XPA-203ENST00000485042 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
XPA-203ENST00000485042 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
XPA-203ENST00000485042 KCNA4P22459 653 aa12.87□□□□□ -0.35
XPA-203ENST00000485042 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
XPA-203ENST00000485042 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
XPA-203ENST00000485042 POTEHQ6S545 545 aa12.75□□□□□ -0.37
XPA-203ENST00000485042 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
XPA-203ENST00000485042 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
XPA-203ENST00000485042 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
XPA-203ENST00000485042 CNKSR2Q8WXI2 1034 aa12.61□□□□□ -0.39
XPA-203ENST00000485042 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
XPA-203ENST00000485042 DNAJC5BQ9UF47 199 aa12.46□□□□□ -0.41
XPA-203ENST00000485042 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
XPA-203ENST00000485042 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
XPA-203ENST00000485042 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
XPA-203ENST00000485042 NPM3O75607 178 aaKnown RBP12.2□□□□□ -0.46
XPA-203ENST00000485042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.2□□□□□ -0.463e-10■■■■■ 32.3
XPA-203ENST00000485042 U3KPZ7 1027 aaPredicted RBP11.89□□□□□ -0.51
XPA-203ENST00000485042 DSG3P32926 999 aa11.88□□□□□ -0.51
XPA-203ENST00000485042 CAPN15O75808 1086 aa11.85□□□□□ -0.51
XPA-203ENST00000485042 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
XPA-203ENST00000485042 ZBTB22O15209 634 aa11.84□□□□□ -0.51
XPA-203ENST00000485042 FOXD4L1Q9NU39 408 aa11.7□□□□□ -0.54
XPA-203ENST00000485042 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
XPA-203ENST00000485042 ABCB7O75027 752 aa11.53□□□□□ -0.56
XPA-203ENST00000485042 APLP2Q06481 763 aa11.53□□□□□ -0.56
XPA-203ENST00000485042 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
XPA-203ENST00000485042 SLC4A2P04920 1241 aa11.52□□□□□ -0.57
XPA-203ENST00000485042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.42□□□□□ -0.58
XPA-203ENST00000485042 HNRNPUL2Q1KMD3 747 aaKnown RBP11.42□□□□□ -0.58
XPA-203ENST00000485042 RBM42Q9BTD8 480 aaKnown RBP11.36□□□□□ -0.59
XPA-203ENST00000485042 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
XPA-203ENST00000485042 SP7Q8TDD2 431 aaPredicted RBP11.28□□□□□ -0.6
XPA-203ENST00000485042 CHRDL2Q6WN34 429 aa11.27□□□□□ -0.61
XPA-203ENST00000485042 MYCNP04198 464 aaPredicted RBP11.26□□□□□ -0.61
XPA-203ENST00000485042 ATXN8OSP0DMR3 200 aa11.22□□□□□ -0.61
XPA-203ENST00000485042 POLA2Q14181 598 aa11.15□□□□□ -0.62
XPA-203ENST00000485042 PLSCR2Q9NRY7 297 aa11.06□□□□□ -0.64
XPA-203ENST00000485042 FKBP8Q14318 412 aa11.05□□□□□ -0.64
XPA-203ENST00000485042 AKT1S1Q96B36 256 aa11.01□□□□□ -0.65
XPA-203ENST00000485042 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
XPA-203ENST00000485042 RTN4Q9NQC3 1192 aaKnown RBP10.97□□□□□ -0.65
XPA-203ENST00000485042 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
XPA-203ENST00000485042 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
XPA-203ENST00000485042 REM2Q8IYK8 340 aaPredicted RBP10.9□□□□□ -0.66
XPA-203ENST00000485042 ZBTB12Q9Y330 459 aaPredicted RBP10.9□□□□□ -0.66
XPA-203ENST00000485042 HAX1O00165 279 aa10.83□□□□□ -0.68
XPA-203ENST00000485042 OSCARQ8IYS5 282 aa10.82□□□□□ -0.68
XPA-203ENST00000485042 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
XPA-203ENST00000485042 PITPNM1O00562 1244 aa10.78□□□□□ -0.68
XPA-203ENST00000485042 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.68
XPA-203ENST00000485042 EVX2Q03828 476 aa10.66□□□□□ -0.7
XPA-203ENST00000485042 LHX8Q68G74 356 aa10.55□□□□□ -0.72
XPA-203ENST00000485042 SPDYE2BA6NHP3 402 aa10.52□□□□□ -0.73
XPA-203ENST00000485042 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.73
XPA-203ENST00000485042 SPDYE6P0CI01 402 aa10.52□□□□□ -0.73
XPA-203ENST00000485042 SPDYE2Q495Y8 402 aa10.52□□□□□ -0.73
XPA-203ENST00000485042 FBXO3Q9UK99 471 aa10.51□□□□□ -0.73
XPA-203ENST00000485042 PRKAR2AP13861 404 aaKnown RBP10.5□□□□□ -0.73
XPA-203ENST00000485042 FBLN2P98095 1184 aa10.46□□□□□ -0.73
XPA-203ENST00000485042 MKRN4PQ13434 485 aaPredicted RBP10.46□□□□□ -0.73
XPA-203ENST00000485042 C19orf67A6NJJ6 358 aa10.45□□□□□ -0.74
XPA-203ENST00000485042 SPDYE1Q8NFV5 336 aaPredicted RBP10.45□□□□□ -0.74
XPA-203ENST00000485042 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
XPA-203ENST00000485042 GABBR2O75899 941 aa10.4□□□□□ -0.74
XPA-203ENST00000485042 PROM2Q8N271 834 aa10.35□□□□□ -0.75
XPA-203ENST00000485042 VASPP50552 380 aaPredicted RBP10.34□□□□□ -0.75
XPA-203ENST00000485042 ZNF692Q9BU19 519 aaPredicted RBP10.34□□□□□ -0.75
XPA-203ENST00000485042 SSUH2Q9Y2M2 353 aa10.34□□□□□ -0.75
XPA-203ENST00000485042 CHADLQ6NUI6 762 aa10.29□□□□□ -0.76
XPA-203ENST00000485042 PRR29P0C7W0 189 aa10.22□□□□□ -0.77
XPA-203ENST00000485042 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
XPA-203ENST00000485042 DCAF8L2P0C7V8 631 aa10.18□□□□□ -0.78
XPA-203ENST00000485042 POTEIP0CG38 1075 aa10.18□□□□□ -0.78
XPA-203ENST00000485042 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
XPA-203ENST00000485042 CD44P16070 742 aaKnown RBP10.14□□□□□ -0.79
XPA-203ENST00000485042 PLCB2Q00722 1185 aa10.13□□□□□ -0.79
XPA-203ENST00000485042 CLCN6P51797 869 aa10.11□□□□□ -0.79
XPA-203ENST00000485042 FARP1Q9Y4F1 1045 aaPredicted RBP10.1□□□□□ -0.79
XPA-203ENST00000485042 KLHL34Q8N239 644 aa10.09□□□□□ -0.79
XPA-203ENST00000485042 PKD2Q13563 968 aa10.08□□□□□ -0.8
XPA-203ENST00000485042 SPOCK2Q92563 424 aa10.04□□□□□ -0.8
XPA-203ENST00000485042 POTEMA6NI47 508 aa10.03□□□□□ -0.8
XPA-203ENST00000485042 HAP1P54257 671 aaPredicted RBP10.03□□□□□ -0.8
XPA-203ENST00000485042 DCBLD2Q96PD2 775 aa10.03□□□□□ -0.8
XPA-203ENST00000485042 STAG3Q9UJ98 1225 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms