RNA–Protein interactions for RNA: ENST00000484042.1

FXR1-217, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-217ENST00000484042 AEBP2Q6ZN18 517 aaPredicted RBP29.93■■■□□ 2.38
FXR1-217ENST00000484042 CHIC1Q5VXU3 224 aa28.32■■■□□ 2.12
FXR1-217ENST00000484042 SENP3Q9H4L4 574 aaPredicted RBP25.48■■□□□ 1.67
FXR1-217ENST00000484042 PHF23Q9BUL5 403 aaPredicted RBP25.19■■□□□ 1.62
FXR1-217ENST00000484042 FOXD1Q16676 465 aa23.8■■□□□ 1.4
FXR1-217ENST00000484042 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
FXR1-217ENST00000484042 MSH5O43196 834 aa22.26■■□□□ 1.15
FXR1-217ENST00000484042 PPP6R1Q9UPN7 881 aa22.23■■□□□ 1.15
FXR1-217ENST00000484042 PIAS4Q8N2W9 510 aaPredicted RBP22.19■■□□□ 1.14
FXR1-217ENST00000484042 ADRA2BP18089 450 aa22.14■■□□□ 1.13
FXR1-217ENST00000484042 POTEDQ86YR6 584 aa21.89■■□□□ 1.09
FXR1-217ENST00000484042 MAPK8IP2Q13387 824 aaPredicted RBP20.38■□□□□ 0.85
FXR1-217ENST00000484042 DMRT2Q9Y5R5 561 aa20.21■□□□□ 0.83
FXR1-217ENST00000484042 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
FXR1-217ENST00000484042 PPP4R3CPQ6ZMV5 832 aa19.8■□□□□ 0.76
FXR1-217ENST00000484042 HOXD11P31277 338 aaPredicted RBP19.45■□□□□ 0.7
FXR1-217ENST00000484042 CNKSR2Q8WXI2 1034 aa19.43■□□□□ 0.7
FXR1-217ENST00000484042 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
FXR1-217ENST00000484042 RNF216Q9NWF9 866 aaPredicted RBP19.27■□□□□ 0.68
FXR1-217ENST00000484042 CACNB1Q02641 598 aaPredicted RBP19.17■□□□□ 0.66
FXR1-217ENST00000484042 RNF39Q9H2S5 420 aa19.02■□□□□ 0.64
FXR1-217ENST00000484042 NCBP3Q53F19 620 aaKnown RBP18.98■□□□□ 0.63
FXR1-217ENST00000484042 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
FXR1-217ENST00000484042 NPM3O75607 178 aaKnown RBP18.74■□□□□ 0.59
FXR1-217ENST00000484042 C1QBPQ07021 282 aaKnown RBP18.72■□□□□ 0.59
FXR1-217ENST00000484042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.567e-6■□□□□ 10.8
FXR1-217ENST00000484042 KCNA4P22459 653 aa18.33■□□□□ 0.52
FXR1-217ENST00000484042 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
FXR1-217ENST00000484042 SLC4A2P04920 1241 aa17.94■□□□□ 0.46
FXR1-217ENST00000484042 SPINK5Q9NQ38 1064 aaPredicted RBP17.91■□□□□ 0.46
FXR1-217ENST00000484042 CAPN15O75808 1086 aa17.86■□□□□ 0.45
FXR1-217ENST00000484042 DSG3P32926 999 aa17.79■□□□□ 0.44
FXR1-217ENST00000484042 TRHP20396 242 aaPredicted RBP17.56■□□□□ 0.4
FXR1-217ENST00000484042 APLP2Q06481 763 aa17.56■□□□□ 0.4
FXR1-217ENST00000484042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
FXR1-217ENST00000484042 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
FXR1-217ENST00000484042 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
FXR1-217ENST00000484042 SAMD1Q6SPF0 538 aaPredicted RBP17.46■□□□□ 0.39
FXR1-217ENST00000484042 ABCB7O75027 752 aa17.45■□□□□ 0.38
FXR1-217ENST00000484042 SLC4A1APQ9BWU0 796 aaKnown RBP17.44■□□□□ 0.38
FXR1-217ENST00000484042 MYCNP04198 464 aaPredicted RBP17.3■□□□□ 0.36
FXR1-217ENST00000484042 POTEHQ6S545 545 aa17.13■□□□□ 0.33
FXR1-217ENST00000484042 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
FXR1-217ENST00000484042 POLA2Q14181 598 aa17.09■□□□□ 0.33
FXR1-217ENST00000484042 EHMT2Q96KQ7 1210 aa17.06■□□□□ 0.32
FXR1-217ENST00000484042 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
FXR1-217ENST00000484042 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
FXR1-217ENST00000484042 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
FXR1-217ENST00000484042 ZBTB22O15209 634 aa16.86■□□□□ 0.29
FXR1-217ENST00000484042 ZBTB12Q9Y330 459 aaPredicted RBP16.67■□□□□ 0.26
FXR1-217ENST00000484042 CHRDL2Q6WN34 429 aa16.62■□□□□ 0.25
FXR1-217ENST00000484042 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
FXR1-217ENST00000484042 AKT1S1Q96B36 256 aa16.55■□□□□ 0.24
FXR1-217ENST00000484042 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
FXR1-217ENST00000484042 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
FXR1-217ENST00000484042 FBLN2P98095 1184 aa16.25■□□□□ 0.19
FXR1-217ENST00000484042 PITPNM1O00562 1244 aa16.23■□□□□ 0.19
FXR1-217ENST00000484042 PIP4P2Q8N4L2 257 aa16.22■□□□□ 0.19
FXR1-217ENST00000484042 SPDYE2BA6NHP3 402 aa16.18■□□□□ 0.18
FXR1-217ENST00000484042 SPDYE6P0CI01 402 aa16.18■□□□□ 0.18
FXR1-217ENST00000484042 SPDYE2Q495Y8 402 aa16.18■□□□□ 0.18
FXR1-217ENST00000484042 MKRN4PQ13434 485 aaPredicted RBP16.17■□□□□ 0.18
FXR1-217ENST00000484042 FXR2P51116 673 aaKnown RBP eCLIP16.11■□□□□ 0.17
FXR1-217ENST00000484042 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
FXR1-217ENST00000484042 ZNF692Q9BU19 519 aaPredicted RBP15.99■□□□□ 0.15
FXR1-217ENST00000484042 SSUH2Q9Y2M2 353 aa15.97■□□□□ 0.15
FXR1-217ENST00000484042 HAX1O00165 279 aa15.94■□□□□ 0.14
FXR1-217ENST00000484042 SPDYE1Q8NFV5 336 aaPredicted RBP15.92■□□□□ 0.14
FXR1-217ENST00000484042 CLEC11AQ9Y240 323 aa15.91■□□□□ 0.14
FXR1-217ENST00000484042 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
FXR1-217ENST00000484042 EVX2Q03828 476 aa15.79■□□□□ 0.12
FXR1-217ENST00000484042 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
FXR1-217ENST00000484042 CHADLQ6NUI6 762 aa15.64■□□□□ 0.09
FXR1-217ENST00000484042 PRR29P0C7W0 189 aa15.63■□□□□ 0.09
FXR1-217ENST00000484042 C19orf67A6NJJ6 358 aa15.6■□□□□ 0.09
FXR1-217ENST00000484042 GABBR2O75899 941 aa15.4■□□□□ 0.06
FXR1-217ENST00000484042 FARP1Q9Y4F1 1045 aaPredicted RBP15.39■□□□□ 0.05
FXR1-217ENST00000484042 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
FXR1-217ENST00000484042 CD44P16070 742 aaKnown RBP15.29■□□□□ 0.04
FXR1-217ENST00000484042 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
FXR1-217ENST00000484042 CREBZFQ9NS37 354 aa15.24■□□□□ 0.03
FXR1-217ENST00000484042 FKBP8Q14318 412 aa15.2■□□□□ 0.02
FXR1-217ENST00000484042 POTEIP0CG38 1075 aa15.09■□□□□ 0.01
FXR1-217ENST00000484042 CLCN6P51797 869 aa15.08■□□□□ 0
FXR1-217ENST00000484042 ZRANB1Q9UGI0 708 aa15.08■□□□□ 0
FXR1-217ENST00000484042 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
FXR1-217ENST00000484042 LHX8Q68G74 356 aa15.04■□□□□ -0
FXR1-217ENST00000484042 MNX1P50219 401 aaPredicted RBP14.98□□□□□ -0.01
FXR1-217ENST00000484042 PROM2Q8N271 834 aa14.97□□□□□ -0.01
FXR1-217ENST00000484042 NPM1P06748 294 aaKnown RBP eCLIP14.93□□□□□ -0.02
FXR1-217ENST00000484042 DCBLD2Q96PD2 775 aa14.93□□□□□ -0.02
FXR1-217ENST00000484042 PAK3O75914 559 aaPredicted RBP14.9□□□□□ -0.02
FXR1-217ENST00000484042 GALR2O43603 387 aaPredicted RBP14.89□□□□□ -0.03
FXR1-217ENST00000484042 PHF12Q96QT6 1004 aa14.87□□□□□ -0.03
FXR1-217ENST00000484042 TSPYL2Q9H2G4 693 aaPredicted RBP14.69□□□□□ -0.06
FXR1-217ENST00000484042 MIER1Q8N108 512 aa14.67□□□□□ -0.06
FXR1-217ENST00000484042 FBXO3Q9UK99 471 aa14.67□□□□□ -0.06
FXR1-217ENST00000484042 MS4A3Q96HJ5 214 aa14.66□□□□□ -0.06
FXR1-217ENST00000484042 PELP1Q8IZL8 1130 aaKnown RBP14.64□□□□□ -0.07
FXR1-217ENST00000484042 CCDC61Q9Y6R9 512 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms