RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 AEBP2Q6ZN18 517 aaPredicted RBP15.4■□□□□ 0.06
ZNF561-216ENST00000483768 CHIC1Q5VXU3 224 aa14.7□□□□□ -0.06
ZNF561-216ENST00000483768 SENP3Q9H4L4 574 aaPredicted RBP13.13□□□□□ -0.31
ZNF561-216ENST00000483768 PHF23Q9BUL5 403 aaPredicted RBP12.99□□□□□ -0.33
ZNF561-216ENST00000483768 FOXD1Q16676 465 aa12.24□□□□□ -0.45
ZNF561-216ENST00000483768 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
ZNF561-216ENST00000483768 ADRA2BP18089 450 aa11.51□□□□□ -0.57
ZNF561-216ENST00000483768 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
ZNF561-216ENST00000483768 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
ZNF561-216ENST00000483768 MSH5O43196 834 aa11.41□□□□□ -0.58
ZNF561-216ENST00000483768 POTEDQ86YR6 584 aa11.01□□□□□ -0.65
ZNF561-216ENST00000483768 MAPK8IP2Q13387 824 aaPredicted RBP10.54□□□□□ -0.72
ZNF561-216ENST00000483768 SCAF1Q9H7N4 1312 aaKnown RBP10.51□□□□□ -0.73
ZNF561-216ENST00000483768 DMRT2Q9Y5R5 561 aa10.41□□□□□ -0.74
ZNF561-216ENST00000483768 PPP4R3CPQ6ZMV5 832 aa10.37□□□□□ -0.75
ZNF561-216ENST00000483768 CNKSR2Q8WXI2 1034 aa10.13□□□□□ -0.79
ZNF561-216ENST00000483768 DCAF8L1A6NGE4 600 aa10.09□□□□□ -0.79
ZNF561-216ENST00000483768 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
ZNF561-216ENST00000483768 RNF216Q9NWF9 866 aaPredicted RBP10.01□□□□□ -0.81
ZNF561-216ENST00000483768 NCBP3Q53F19 620 aaKnown RBP10□□□□□ -0.81
ZNF561-216ENST00000483768 NPM3O75607 178 aaKnown RBP9.84□□□□□ -0.83
ZNF561-216ENST00000483768 CACNB1Q02641 598 aaPredicted RBP9.8□□□□□ -0.84
ZNF561-216ENST00000483768 KCNA4P22459 653 aa9.75□□□□□ -0.85
ZNF561-216ENST00000483768 RNF39Q9H2S5 420 aa9.73□□□□□ -0.85
ZNF561-216ENST00000483768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.65□□□□□ -0.86
ZNF561-216ENST00000483768 DNAJC5BQ9UF47 199 aa9.62□□□□□ -0.87
ZNF561-216ENST00000483768 C1QBPQ07021 282 aaKnown RBP9.6□□□□□ -0.87
ZNF561-216ENST00000483768 U3KPZ7 1027 aaPredicted RBP9.41□□□□□ -0.9
ZNF561-216ENST00000483768 SLC4A2P04920 1241 aa9.37□□□□□ -0.91
ZNF561-216ENST00000483768 CAPN15O75808 1086 aa9.29□□□□□ -0.92
ZNF561-216ENST00000483768 SPINK5Q9NQ38 1064 aaPredicted RBP9.28□□□□□ -0.92
ZNF561-216ENST00000483768 SLC4A1APQ9BWU0 796 aaKnown RBP9.23□□□□□ -0.93
ZNF561-216ENST00000483768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.17□□□□□ -0.94
ZNF561-216ENST00000483768 TRHP20396 242 aaPredicted RBP9.17□□□□□ -0.94
ZNF561-216ENST00000483768 APLP2Q06481 763 aa9.17□□□□□ -0.94
ZNF561-216ENST00000483768 HNRNPUL2Q1KMD3 747 aaKnown RBP9.17□□□□□ -0.94
ZNF561-216ENST00000483768 DSG3P32926 999 aa9.15□□□□□ -0.94
ZNF561-216ENST00000483768 SAMD1Q6SPF0 538 aaPredicted RBP9.13□□□□□ -0.95
ZNF561-216ENST00000483768 MYCNP04198 464 aaPredicted RBP9.1□□□□□ -0.95
ZNF561-216ENST00000483768 ABCB7O75027 752 aa9.09□□□□□ -0.95
ZNF561-216ENST00000483768 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
ZNF561-216ENST00000483768 FOXD4L1Q9NU39 408 aa9.05□□□□□ -0.96
ZNF561-216ENST00000483768 ZBTB22O15209 634 aa8.94□□□□□ -0.98
ZNF561-216ENST00000483768 POLA2Q14181 598 aa8.91□□□□□ -0.98
ZNF561-216ENST00000483768 ATF5Q9Y2D1 282 aaPredicted RBP8.9□□□□□ -0.98
ZNF561-216ENST00000483768 RBM42Q9BTD8 480 aaKnown RBP8.74□□□□□ -1.01
ZNF561-216ENST00000483768 ATXN8OSP0DMR3 200 aa8.73□□□□□ -1.01
ZNF561-216ENST00000483768 ZBTB12Q9Y330 459 aaPredicted RBP8.71□□□□□ -1.02
ZNF561-216ENST00000483768 POTEHQ6S545 545 aa8.65□□□□□ -1.02
ZNF561-216ENST00000483768 OSCARQ8IYS5 282 aa8.62□□□□□ -1.03
ZNF561-216ENST00000483768 EHMT2Q96KQ7 1210 aa8.62□□□□□ -1.03
ZNF561-216ENST00000483768 CSRNP3Q8WYN3 585 aa8.61□□□□□ -1.03
ZNF561-216ENST00000483768 FBLN2P98095 1184 aa8.57□□□□□ -1.04
ZNF561-216ENST00000483768 AKT1S1Q96B36 256 aa8.55□□□□□ -1.04
ZNF561-216ENST00000483768 CHRDL2Q6WN34 429 aa8.53□□□□□ -1.04
ZNF561-216ENST00000483768 REM2Q8IYK8 340 aaPredicted RBP8.49□□□□□ -1.05
ZNF561-216ENST00000483768 MKRN4PQ13434 485 aaPredicted RBP8.48□□□□□ -1.05
ZNF561-216ENST00000483768 SPDYE2BA6NHP3 402 aa8.44□□□□□ -1.06
ZNF561-216ENST00000483768 SPDYE6P0CI01 402 aa8.44□□□□□ -1.06
ZNF561-216ENST00000483768 SPDYE2Q495Y8 402 aa8.44□□□□□ -1.06
ZNF561-216ENST00000483768 PITPNM1O00562 1244 aa8.4□□□□□ -1.06
ZNF561-216ENST00000483768 ZNF692Q9BU19 519 aaPredicted RBP8.4□□□□□ -1.06
ZNF561-216ENST00000483768 PIP4P2Q8N4L2 257 aa8.34□□□□□ -1.07
ZNF561-216ENST00000483768 CLEC11AQ9Y240 323 aa8.33□□□□□ -1.08
ZNF561-216ENST00000483768 SSUH2Q9Y2M2 353 aa8.32□□□□□ -1.08
ZNF561-216ENST00000483768 SPDYE1Q8NFV5 336 aaPredicted RBP8.3□□□□□ -1.08
ZNF561-216ENST00000483768 FXR2P51116 673 aaKnown RBP eCLIP8.27□□□□□ -1.09
ZNF561-216ENST00000483768 PABPN1Q86U42 306 aaKnown RBP eCLIP8.27□□□□□ -1.09
ZNF561-216ENST00000483768 HAX1O00165 279 aa8.22□□□□□ -1.09
ZNF561-216ENST00000483768 PRKAR2AP13861 404 aaKnown RBP8.2□□□□□ -1.1
ZNF561-216ENST00000483768 PRR29P0C7W0 189 aa8.17□□□□□ -1.1
ZNF561-216ENST00000483768 SPDYE4A6NLX3 237 aa8.15□□□□□ -1.1
ZNF561-216ENST00000483768 CHADLQ6NUI6 762 aa8.14□□□□□ -1.11
ZNF561-216ENST00000483768 SP7Q8TDD2 431 aaPredicted RBP8.14□□□□□ -1.11
ZNF561-216ENST00000483768 EVX2Q03828 476 aa8.08□□□□□ -1.12
ZNF561-216ENST00000483768 STAG3Q9UJ98 1225 aa8.04□□□□□ -1.12
ZNF561-216ENST00000483768 C19orf67A6NJJ6 358 aa8.01□□□□□ -1.13
ZNF561-216ENST00000483768 FARP1Q9Y4F1 1045 aaPredicted RBP8□□□□□ -1.13
ZNF561-216ENST00000483768 CREBZFQ9NS37 354 aa7.96□□□□□ -1.14
ZNF561-216ENST00000483768 CD44P16070 742 aaKnown RBP7.95□□□□□ -1.14
ZNF561-216ENST00000483768 GABBR2O75899 941 aa7.9□□□□□ -1.14
ZNF561-216ENST00000483768 PROM2Q8N271 834 aa7.88□□□□□ -1.15
ZNF561-216ENST00000483768 ZRANB1Q9UGI0 708 aa7.86□□□□□ -1.15
ZNF561-216ENST00000483768 FKBP8Q14318 412 aa7.85□□□□□ -1.15
ZNF561-216ENST00000483768 NPM1P06748 294 aaKnown RBP eCLIP7.83□□□□□ -1.16
ZNF561-216ENST00000483768 PAK3O75914 559 aaPredicted RBP7.82□□□□□ -1.16
ZNF561-216ENST00000483768 MNX1P50219 401 aaPredicted RBP7.8□□□□□ -1.16
ZNF561-216ENST00000483768 MIER1Q8N108 512 aa7.8□□□□□ -1.16
ZNF561-216ENST00000483768 ZNF579Q8NAF0 562 aaKnown RBP7.79□□□□□ -1.16
ZNF561-216ENST00000483768 PLEKHG5O94827 1062 aa7.77□□□□□ -1.17
ZNF561-216ENST00000483768 PHF12Q96QT6 1004 aa7.77□□□□□ -1.17
ZNF561-216ENST00000483768 PLCD3Q8N3E9 789 aa7.75□□□□□ -1.17
ZNF561-216ENST00000483768 CLCN6P51797 869 aa7.74□□□□□ -1.17
ZNF561-216ENST00000483768 DCBLD2Q96PD2 775 aa7.74□□□□□ -1.17
ZNF561-216ENST00000483768 TSPYL2Q9H2G4 693 aaPredicted RBP7.74□□□□□ -1.17
ZNF561-216ENST00000483768 GALR2O43603 387 aaPredicted RBP7.72□□□□□ -1.17
ZNF561-216ENST00000483768 POTEIP0CG38 1075 aa7.72□□□□□ -1.17
ZNF561-216ENST00000483768 LHX8Q68G74 356 aa7.66□□□□□ -1.18
ZNF561-216ENST00000483768 RASEFQ8IZ41 740 aa7.65□□□□□ -1.18
ZNF561-216ENST00000483768 MS4A3Q96HJ5 214 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 530.5 ms