RNA–Protein interactions for RNA: ENST00000483672.1

USP34-214, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 365 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-214ENST00000483672 AEBP2Q6ZN18 517 aaPredicted RBP26.56■■□□□ 1.84
USP34-214ENST00000483672 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
USP34-214ENST00000483672 SENP3Q9H4L4 574 aaPredicted RBP22.59■■□□□ 1.21
USP34-214ENST00000483672 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
USP34-214ENST00000483672 FOXD1Q16676 465 aa21.16■□□□□ 0.98
USP34-214ENST00000483672 POTEDQ86YR6 584 aa19.83■□□□□ 0.77
USP34-214ENST00000483672 MSH5O43196 834 aa19.8■□□□□ 0.76
USP34-214ENST00000483672 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
USP34-214ENST00000483672 PIAS4Q8N2W9 510 aaPredicted RBP19.65■□□□□ 0.74
USP34-214ENST00000483672 PPP6R1Q9UPN7 881 aa19.64■□□□□ 0.73
USP34-214ENST00000483672 ADRA2BP18089 450 aa19.53■□□□□ 0.72
USP34-214ENST00000483672 MAPK8IP2Q13387 824 aaPredicted RBP18.04■□□□□ 0.48
USP34-214ENST00000483672 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
USP34-214ENST00000483672 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
USP34-214ENST00000483672 PPP4R3CPQ6ZMV5 832 aa17.32■□□□□ 0.36
USP34-214ENST00000483672 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
USP34-214ENST00000483672 HOXD11P31277 338 aaPredicted RBP17.16■□□□□ 0.34
USP34-214ENST00000483672 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
USP34-214ENST00000483672 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
USP34-214ENST00000483672 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
USP34-214ENST00000483672 RNF39Q9H2S5 420 aa16.93■□□□□ 0.3
USP34-214ENST00000483672 C1QBPQ07021 282 aaKnown RBP16.63■□□□□ 0.25
USP34-214ENST00000483672 DNAJC5BQ9UF47 199 aa16.59■□□□□ 0.25
USP34-214ENST00000483672 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
USP34-214ENST00000483672 NPM3O75607 178 aaKnown RBP16.35■□□□□ 0.21
USP34-214ENST00000483672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.2
USP34-214ENST00000483672 U3KPZ7 1027 aaPredicted RBP15.99■□□□□ 0.15
USP34-214ENST00000483672 KCNA4P22459 653 aa15.84■□□□□ 0.13
USP34-214ENST00000483672 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
USP34-214ENST00000483672 DSG3P32926 999 aa15.79■□□□□ 0.12
USP34-214ENST00000483672 CAPN15O75808 1086 aa15.76■□□□□ 0.11
USP34-214ENST00000483672 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
USP34-214ENST00000483672 TRHP20396 242 aaPredicted RBP15.47■□□□□ 0.07
USP34-214ENST00000483672 POTEHQ6S545 545 aa15.47■□□□□ 0.07
USP34-214ENST00000483672 ABCB7O75027 752 aa15.41■□□□□ 0.06
USP34-214ENST00000483672 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
USP34-214ENST00000483672 APLP2Q06481 763 aa15.38■□□□□ 0.05
USP34-214ENST00000483672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
USP34-214ENST00000483672 HNRNPUL2Q1KMD3 747 aaKnown RBP15.34■□□□□ 0.05
USP34-214ENST00000483672 SAMD1Q6SPF0 538 aaPredicted RBP15.27■□□□□ 0.04
USP34-214ENST00000483672 MYCNP04198 464 aaPredicted RBP15.08■□□□□ 0
USP34-214ENST00000483672 POLA2Q14181 598 aa15.01□□□□□ -0.01
USP34-214ENST00000483672 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
USP34-214ENST00000483672 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
USP34-214ENST00000483672 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
USP34-214ENST00000483672 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
USP34-214ENST00000483672 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
USP34-214ENST00000483672 AKT1S1Q96B36 256 aa14.63□□□□□ -0.07
USP34-214ENST00000483672 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
USP34-214ENST00000483672 ZBTB22O15209 634 aa14.58□□□□□ -0.08
USP34-214ENST00000483672 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
USP34-214ENST00000483672 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
USP34-214ENST00000483672 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
USP34-214ENST00000483672 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
USP34-214ENST00000483672 PITPNM1O00562 1244 aa14.36□□□□□ -0.11
USP34-214ENST00000483672 ATXN8OSP0DMR3 200 aa14.36□□□□□ -0.11
USP34-214ENST00000483672 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.123e-14■■■■■ 30.8
USP34-214ENST00000483672 HAX1O00165 279 aa14.19□□□□□ -0.14
USP34-214ENST00000483672 SPDYE2BA6NHP3 402 aa14.18□□□□□ -0.14
USP34-214ENST00000483672 SPDYE6P0CI01 402 aa14.18□□□□□ -0.14
USP34-214ENST00000483672 SPDYE2Q495Y8 402 aa14.18□□□□□ -0.14
USP34-214ENST00000483672 FBLN2P98095 1184 aa14.16□□□□□ -0.14
USP34-214ENST00000483672 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
USP34-214ENST00000483672 EVX2Q03828 476 aa14.1□□□□□ -0.15
USP34-214ENST00000483672 SSUH2Q9Y2M2 353 aa14.01□□□□□ -0.17
USP34-214ENST00000483672 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
USP34-214ENST00000483672 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
USP34-214ENST00000483672 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
USP34-214ENST00000483672 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
USP34-214ENST00000483672 C19orf67A6NJJ6 358 aa13.85□□□□□ -0.19
USP34-214ENST00000483672 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
USP34-214ENST00000483672 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
USP34-214ENST00000483672 GABBR2O75899 941 aa13.71□□□□□ -0.21
USP34-214ENST00000483672 PRR29P0C7W0 189 aa13.71□□□□□ -0.21
USP34-214ENST00000483672 CSRNP3Q8WYN3 585 aa13.68□□□□□ -0.22
USP34-214ENST00000483672 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
USP34-214ENST00000483672 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
USP34-214ENST00000483672 LHX8Q68G74 356 aa13.48□□□□□ -0.25
USP34-214ENST00000483672 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
USP34-214ENST00000483672 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
USP34-214ENST00000483672 CLCN6P51797 869 aa13.32□□□□□ -0.28
USP34-214ENST00000483672 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
USP34-214ENST00000483672 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
USP34-214ENST00000483672 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
USP34-214ENST00000483672 SPDYE4A6NLX3 237 aa13.28□□□□□ -0.28
USP34-214ENST00000483672 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
USP34-214ENST00000483672 DCBLD2Q96PD2 775 aa13.22□□□□□ -0.29
USP34-214ENST00000483672 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
USP34-214ENST00000483672 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
USP34-214ENST00000483672 PHF12Q96QT6 1004 aa13.1□□□□□ -0.31
USP34-214ENST00000483672 PAK3O75914 559 aaPredicted RBP13.05□□□□□ -0.32
USP34-214ENST00000483672 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP34-214ENST00000483672 POTEB2H3BUK9 544 aa13.03□□□□□ -0.32
USP34-214ENST00000483672 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
USP34-214ENST00000483672 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
USP34-214ENST00000483672 PROM2Q8N271 834 aa12.97□□□□□ -0.33
USP34-214ENST00000483672 MS4A3Q96HJ5 214 aa12.92□□□□□ -0.34
USP34-214ENST00000483672 ASTLQ6HA08 431 aaPredicted RBP12.87□□□□□ -0.35
USP34-214ENST00000483672 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
USP34-214ENST00000483672 TSPYL2Q9H2G4 693 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms