RNA–Protein interactions for RNA: ENST00000481337.5

ALCAM-206, Transcript of activated leukocyte cell adhesion molecule, humanhuman

TSL 2

Gene ALCAM, Length 1,242 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-206ENST00000481337 AEBP2Q6ZN18 517 aaPredicted RBP32.68■■■□□ 2.82
ALCAM-206ENST00000481337 CHIC1Q5VXU3 224 aa30.97■■■□□ 2.55
ALCAM-206ENST00000481337 SENP3Q9H4L4 574 aaPredicted RBP27.89■■■□□ 2.06
ALCAM-206ENST00000481337 PHF23Q9BUL5 403 aaPredicted RBP27.49■■□□□ 1.99
ALCAM-206ENST00000481337 FOXD1Q16676 465 aa25.99■■□□□ 1.75
ALCAM-206ENST00000481337 PLPPR3Q6T4P5 718 aa24.7■■□□□ 1.54
ALCAM-206ENST00000481337 MSH5O43196 834 aa24.37■■□□□ 1.49
ALCAM-206ENST00000481337 PIAS4Q8N2W9 510 aaPredicted RBP24.25■■□□□ 1.47
ALCAM-206ENST00000481337 PPP6R1Q9UPN7 881 aa24.23■■□□□ 1.47
ALCAM-206ENST00000481337 ADRA2BP18089 450 aa24.13■■□□□ 1.45
ALCAM-206ENST00000481337 POTEDQ86YR6 584 aa23.9■■□□□ 1.42
ALCAM-206ENST00000481337 MAPK8IP2Q13387 824 aaPredicted RBP22.18■■□□□ 1.14
ALCAM-206ENST00000481337 DMRT2Q9Y5R5 561 aa22.12■■□□□ 1.13
ALCAM-206ENST00000481337 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
ALCAM-206ENST00000481337 PPP4R3CPQ6ZMV5 832 aa21.62■■□□□ 1.05
ALCAM-206ENST00000481337 HOXD11P31277 338 aaPredicted RBP21.28■■□□□ 1
ALCAM-206ENST00000481337 CNKSR2Q8WXI2 1034 aa21.25■□□□□ 0.99
ALCAM-206ENST00000481337 DCAF8L1A6NGE4 600 aa21.12■□□□□ 0.97
ALCAM-206ENST00000481337 RNF216Q9NWF9 866 aaPredicted RBP21.09■□□□□ 0.97
ALCAM-206ENST00000481337 CACNB1Q02641 598 aaPredicted RBP20.91■□□□□ 0.94
ALCAM-206ENST00000481337 RNF39Q9H2S5 420 aa20.79■□□□□ 0.92
ALCAM-206ENST00000481337 NCBP3Q53F19 620 aaKnown RBP20.77■□□□□ 0.92
ALCAM-206ENST00000481337 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
ALCAM-206ENST00000481337 NPM3O75607 178 aaKnown RBP20.49■□□□□ 0.87
ALCAM-206ENST00000481337 C1QBPQ07021 282 aaKnown RBP20.49■□□□□ 0.87
ALCAM-206ENST00000481337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.83
ALCAM-206ENST00000481337 KCNA4P22459 653 aa20.01■□□□□ 0.79
ALCAM-206ENST00000481337 U3KPZ7 1027 aaPredicted RBP19.82■□□□□ 0.76
ALCAM-206ENST00000481337 SLC4A2P04920 1241 aa19.59■□□□□ 0.73
ALCAM-206ENST00000481337 SPINK5Q9NQ38 1064 aaPredicted RBP19.54■□□□□ 0.72
ALCAM-206ENST00000481337 CAPN15O75808 1086 aa19.48■□□□□ 0.71
ALCAM-206ENST00000481337 DSG3P32926 999 aa19.44■□□□□ 0.7
ALCAM-206ENST00000481337 APLP2Q06481 763 aa19.26■□□□□ 0.67
ALCAM-206ENST00000481337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
ALCAM-206ENST00000481337 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
ALCAM-206ENST00000481337 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
ALCAM-206ENST00000481337 TRHP20396 242 aaPredicted RBP19.15■□□□□ 0.66
ALCAM-206ENST00000481337 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
ALCAM-206ENST00000481337 ABCB7O75027 752 aa19.03■□□□□ 0.64
ALCAM-206ENST00000481337 MYCNP04198 464 aaPredicted RBP18.96■□□□□ 0.63
ALCAM-206ENST00000481337 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
ALCAM-206ENST00000481337 POTEHQ6S545 545 aa18.72■□□□□ 0.59
ALCAM-206ENST00000481337 FOXD4L1Q9NU39 408 aa18.71■□□□□ 0.59
ALCAM-206ENST00000481337 POLA2Q14181 598 aa18.63■□□□□ 0.57
ALCAM-206ENST00000481337 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
ALCAM-206ENST00000481337 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
ALCAM-206ENST00000481337 ZBTB22O15209 634 aa18.41■□□□□ 0.54
ALCAM-206ENST00000481337 ZBTB12Q9Y330 459 aaPredicted RBP18.29■□□□□ 0.52
ALCAM-206ENST00000481337 ATXN8OSP0DMR3 200 aa18.17■□□□□ 0.5
ALCAM-206ENST00000481337 CHRDL2Q6WN34 429 aa18.16■□□□□ 0.5
ALCAM-206ENST00000481337 AKT1S1Q96B36 256 aa18.11■□□□□ 0.49
ALCAM-206ENST00000481337 OSCARQ8IYS5 282 aa18.06■□□□□ 0.48
ALCAM-206ENST00000481337 REM2Q8IYK8 340 aaPredicted RBP17.92■□□□□ 0.46
ALCAM-206ENST00000481337 FBLN2P98095 1184 aa17.77■□□□□ 0.44
ALCAM-206ENST00000481337 PITPNM1O00562 1244 aa17.74■□□□□ 0.43
ALCAM-206ENST00000481337 SPDYE2BA6NHP3 402 aa17.72■□□□□ 0.43
ALCAM-206ENST00000481337 SPDYE6P0CI01 402 aa17.72■□□□□ 0.43
ALCAM-206ENST00000481337 SPDYE2Q495Y8 402 aa17.72■□□□□ 0.43
ALCAM-206ENST00000481337 PIP4P2Q8N4L2 257 aa17.71■□□□□ 0.43
ALCAM-206ENST00000481337 MKRN4PQ13434 485 aaPredicted RBP17.67■□□□□ 0.42
ALCAM-206ENST00000481337 FXR2P51116 673 aaKnown RBP eCLIP17.61■□□□□ 0.41
ALCAM-206ENST00000481337 SP7Q8TDD2 431 aaPredicted RBP17.52■□□□□ 0.4
ALCAM-206ENST00000481337 SSUH2Q9Y2M2 353 aa17.5■□□□□ 0.39
ALCAM-206ENST00000481337 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
ALCAM-206ENST00000481337 ZNF692Q9BU19 519 aaPredicted RBP17.45■□□□□ 0.38
ALCAM-206ENST00000481337 SPDYE1Q8NFV5 336 aaPredicted RBP17.41■□□□□ 0.38
ALCAM-206ENST00000481337 HAX1O00165 279 aa17.37■□□□□ 0.37
ALCAM-206ENST00000481337 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
ALCAM-206ENST00000481337 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
ALCAM-206ENST00000481337 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
ALCAM-206ENST00000481337 EVX2Q03828 476 aa17.18■□□□□ 0.34
ALCAM-206ENST00000481337 EHMT2Q96KQ7 1210 aa17.16■□□□□ 0.34
ALCAM-206ENST00000481337 PRR29P0C7W0 189 aa17.06■□□□□ 0.32
ALCAM-206ENST00000481337 C19orf67A6NJJ6 358 aa17.05■□□□□ 0.32
ALCAM-206ENST00000481337 CHADLQ6NUI6 762 aa17.04■□□□□ 0.32
ALCAM-206ENST00000481337 GABBR2O75899 941 aa16.79■□□□□ 0.28
ALCAM-206ENST00000481337 FARP1Q9Y4F1 1045 aaPredicted RBP16.79■□□□□ 0.28
ALCAM-206ENST00000481337 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.28
ALCAM-206ENST00000481337 STAG3Q9UJ98 1225 aa16.73■□□□□ 0.27
ALCAM-206ENST00000481337 CD44P16070 742 aaKnown RBP16.71■□□□□ 0.27
ALCAM-206ENST00000481337 CREBZFQ9NS37 354 aa16.65■□□□□ 0.26
ALCAM-206ENST00000481337 CLCN6P51797 869 aa16.55■□□□□ 0.24
ALCAM-206ENST00000481337 ZNF579Q8NAF0 562 aaKnown RBP16.49■□□□□ 0.23
ALCAM-206ENST00000481337 POTEIP0CG38 1075 aa16.45■□□□□ 0.22
ALCAM-206ENST00000481337 ZRANB1Q9UGI0 708 aa16.45■□□□□ 0.22
ALCAM-206ENST00000481337 PROM2Q8N271 834 aa16.43■□□□□ 0.22
ALCAM-206ENST00000481337 LHX8Q68G74 356 aa16.4■□□□□ 0.22
ALCAM-206ENST00000481337 MNX1P50219 401 aaPredicted RBP16.38■□□□□ 0.21
ALCAM-206ENST00000481337 NPM1P06748 294 aaKnown RBP eCLIP16.32■□□□□ 0.2
ALCAM-206ENST00000481337 PAK3O75914 559 aaPredicted RBP16.31■□□□□ 0.2
ALCAM-206ENST00000481337 DCBLD2Q96PD2 775 aa16.3■□□□□ 0.2
ALCAM-206ENST00000481337 GALR2O43603 387 aaPredicted RBP16.26■□□□□ 0.19
ALCAM-206ENST00000481337 PHF12Q96QT6 1004 aa16.22■□□□□ 0.19
ALCAM-206ENST00000481337 MS4A3Q96HJ5 214 aa16.02■□□□□ 0.16
ALCAM-206ENST00000481337 TSPYL2Q9H2G4 693 aaPredicted RBP16■□□□□ 0.15
ALCAM-206ENST00000481337 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
ALCAM-206ENST00000481337 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
ALCAM-206ENST00000481337 MIER1Q8N108 512 aa15.97■□□□□ 0.15
ALCAM-206ENST00000481337 ASTLQ6HA08 431 aaPredicted RBP15.95■□□□□ 0.14
ALCAM-206ENST00000481337 PELP1Q8IZL8 1130 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms