RNA–Protein interactions for RNA: ENST00000480205.5

PSMD6-208, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 3

Gene PSMD6, Length 657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-208ENST00000480205 AEBP2Q6ZN18 517 aaPredicted RBP26.08■■□□□ 1.77
PSMD6-208ENST00000480205 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
PSMD6-208ENST00000480205 SENP3Q9H4L4 574 aaPredicted RBP22.26■■□□□ 1.15
PSMD6-208ENST00000480205 PHF23Q9BUL5 403 aaPredicted RBP21.96■■□□□ 1.11
PSMD6-208ENST00000480205 FOXD1Q16676 465 aa20.79■□□□□ 0.92
PSMD6-208ENST00000480205 MSH5O43196 834 aa19.53■□□□□ 0.72
PSMD6-208ENST00000480205 PLPPR3Q6T4P5 718 aa19.48■□□□□ 0.71
PSMD6-208ENST00000480205 POTEDQ86YR6 584 aa19.48■□□□□ 0.71
PSMD6-208ENST00000480205 PIAS4Q8N2W9 510 aaPredicted RBP19.37■□□□□ 0.69
PSMD6-208ENST00000480205 PPP6R1Q9UPN7 881 aa19.28■□□□□ 0.68
PSMD6-208ENST00000480205 ADRA2BP18089 450 aa19.2■□□□□ 0.66
PSMD6-208ENST00000480205 MAPK8IP2Q13387 824 aaPredicted RBP17.71■□□□□ 0.43
PSMD6-208ENST00000480205 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
PSMD6-208ENST00000480205 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
PSMD6-208ENST00000480205 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
PSMD6-208ENST00000480205 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
PSMD6-208ENST00000480205 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
PSMD6-208ENST00000480205 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
PSMD6-208ENST00000480205 CNKSR2Q8WXI2 1034 aa16.78■□□□□ 0.28
PSMD6-208ENST00000480205 RNF216Q9NWF9 866 aaPredicted RBP16.69■□□□□ 0.26
PSMD6-208ENST00000480205 RNF39Q9H2S5 420 aa16.65■□□□□ 0.26
PSMD6-208ENST00000480205 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
PSMD6-208ENST00000480205 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
PSMD6-208ENST00000480205 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
PSMD6-208ENST00000480205 NPM3O75607 178 aaKnown RBP16.1■□□□□ 0.17
PSMD6-208ENST00000480205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.09■□□□□ 0.179e-7■■■■□ 22.2
PSMD6-208ENST00000480205 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
PSMD6-208ENST00000480205 KCNA4P22459 653 aa15.59■□□□□ 0.09
PSMD6-208ENST00000480205 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.08
PSMD6-208ENST00000480205 CAPN15O75808 1086 aa15.55■□□□□ 0.08
PSMD6-208ENST00000480205 DSG3P32926 999 aa15.52■□□□□ 0.08
PSMD6-208ENST00000480205 SLC4A2P04920 1241 aa15.44■□□□□ 0.06
PSMD6-208ENST00000480205 TRHP20396 242 aaPredicted RBP15.26■□□□□ 0.03
PSMD6-208ENST00000480205 APLP2Q06481 763 aa15.24■□□□□ 0.03
PSMD6-208ENST00000480205 POTEHQ6S545 545 aa15.21■□□□□ 0.03
PSMD6-208ENST00000480205 ZNF219Q9P2Y4 722 aaPredicted RBP15.19■□□□□ 0.02
PSMD6-208ENST00000480205 ABCB7O75027 752 aa15.18■□□□□ 0.02
PSMD6-208ENST00000480205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
PSMD6-208ENST00000480205 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
PSMD6-208ENST00000480205 SAMD1Q6SPF0 538 aaPredicted RBP15.08■□□□□ 0
PSMD6-208ENST00000480205 MYCNP04198 464 aaPredicted RBP14.88□□□□□ -0.03
PSMD6-208ENST00000480205 POLA2Q14181 598 aa14.79□□□□□ -0.04
PSMD6-208ENST00000480205 RBM42Q9BTD8 480 aaKnown RBP14.79□□□□□ -0.04
PSMD6-208ENST00000480205 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
PSMD6-208ENST00000480205 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
PSMD6-208ENST00000480205 CHRDL2Q6WN34 429 aa14.58□□□□□ -0.08
PSMD6-208ENST00000480205 ATF5Q9Y2D1 282 aaPredicted RBP14.58□□□□□ -0.08
PSMD6-208ENST00000480205 ZBTB12Q9Y330 459 aaPredicted RBP14.45□□□□□ -0.1
PSMD6-208ENST00000480205 AKT1S1Q96B36 256 aa14.42□□□□□ -0.1
PSMD6-208ENST00000480205 ZBTB22O15209 634 aa14.33□□□□□ -0.12
PSMD6-208ENST00000480205 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
PSMD6-208ENST00000480205 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
PSMD6-208ENST00000480205 PIP4P2Q8N4L2 257 aa14.19□□□□□ -0.14
PSMD6-208ENST00000480205 ATXN8OSP0DMR3 200 aa14.17□□□□□ -0.14
PSMD6-208ENST00000480205 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
PSMD6-208ENST00000480205 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
PSMD6-208ENST00000480205 FXR2P51116 673 aaKnown RBP eCLIP14.07□□□□□ -0.16
PSMD6-208ENST00000480205 FBLN2P98095 1184 aa14.01□□□□□ -0.17
PSMD6-208ENST00000480205 HAX1O00165 279 aa14□□□□□ -0.17
PSMD6-208ENST00000480205 SPDYE2BA6NHP3 402 aa13.99□□□□□ -0.17
PSMD6-208ENST00000480205 SPDYE6P0CI01 402 aa13.99□□□□□ -0.17
PSMD6-208ENST00000480205 SPDYE2Q495Y8 402 aa13.99□□□□□ -0.17
PSMD6-208ENST00000480205 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
PSMD6-208ENST00000480205 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
PSMD6-208ENST00000480205 EVX2Q03828 476 aa13.82□□□□□ -0.2
PSMD6-208ENST00000480205 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
PSMD6-208ENST00000480205 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
PSMD6-208ENST00000480205 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
PSMD6-208ENST00000480205 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
PSMD6-208ENST00000480205 SSUH2Q9Y2M2 353 aa13.78□□□□□ -0.2
PSMD6-208ENST00000480205 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
PSMD6-208ENST00000480205 C19orf67A6NJJ6 358 aa13.62□□□□□ -0.23
PSMD6-208ENST00000480205 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
PSMD6-208ENST00000480205 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
PSMD6-208ENST00000480205 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
PSMD6-208ENST00000480205 GABBR2O75899 941 aa13.48□□□□□ -0.25
PSMD6-208ENST00000480205 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
PSMD6-208ENST00000480205 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
PSMD6-208ENST00000480205 LHX8Q68G74 356 aa13.28□□□□□ -0.28
PSMD6-208ENST00000480205 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
PSMD6-208ENST00000480205 CLCN6P51797 869 aa13.17□□□□□ -0.3
PSMD6-208ENST00000480205 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
PSMD6-208ENST00000480205 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
PSMD6-208ENST00000480205 NISCHQ9Y2I1 1504 aa13.16□□□□□ -0.3
PSMD6-208ENST00000480205 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
PSMD6-208ENST00000480205 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
PSMD6-208ENST00000480205 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
PSMD6-208ENST00000480205 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
PSMD6-208ENST00000480205 GALR2O43603 387 aaPredicted RBP12.97□□□□□ -0.33
PSMD6-208ENST00000480205 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
PSMD6-208ENST00000480205 PHF12Q96QT6 1004 aa12.91□□□□□ -0.34
PSMD6-208ENST00000480205 NPM1P06748 294 aaKnown RBP eCLIP12.9□□□□□ -0.34
PSMD6-208ENST00000480205 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
PSMD6-208ENST00000480205 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
PSMD6-208ENST00000480205 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
PSMD6-208ENST00000480205 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
PSMD6-208ENST00000480205 PROM2Q8N271 834 aa12.75□□□□□ -0.37
PSMD6-208ENST00000480205 MS4A3Q96HJ5 214 aa12.72□□□□□ -0.37
PSMD6-208ENST00000480205 TSPYL2Q9H2G4 693 aaPredicted RBP12.68□□□□□ -0.38
PSMD6-208ENST00000480205 ASTLQ6HA08 431 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms