RNA–Protein interactions for RNA: ENST00000479221.1

NPM1P17-201, Transcript of nucleophosmin 1 pseudogene 17, humanhuman

BASIC

Gene NPM1P17, Length 602 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P17-201ENST00000479221 AEBP2Q6ZN18 517 aaPredicted RBP24.86■■□□□ 1.57
NPM1P17-201ENST00000479221 CHIC1Q5VXU3 224 aa24.57■■□□□ 1.52
NPM1P17-201ENST00000479221 PHF23Q9BUL5 403 aaPredicted RBP21.69■■□□□ 1.06
NPM1P17-201ENST00000479221 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
NPM1P17-201ENST00000479221 PLPPR3Q6T4P5 718 aa20.06■□□□□ 0.8
NPM1P17-201ENST00000479221 FOXD1Q16676 465 aa19.44■□□□□ 0.7
NPM1P17-201ENST00000479221 PPP6R1Q9UPN7 881 aa19.01■□□□□ 0.63
NPM1P17-201ENST00000479221 ADRA2BP18089 450 aa18.98■□□□□ 0.63
NPM1P17-201ENST00000479221 PIAS4Q8N2W9 510 aaPredicted RBP18.37■□□□□ 0.53
NPM1P17-201ENST00000479221 KCNA4P22459 653 aa17.75■□□□□ 0.43
NPM1P17-201ENST00000479221 MSH5O43196 834 aa17.73■□□□□ 0.43
NPM1P17-201ENST00000479221 PPP4R3CPQ6ZMV5 832 aa17.73■□□□□ 0.43
NPM1P17-201ENST00000479221 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
NPM1P17-201ENST00000479221 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.36
NPM1P17-201ENST00000479221 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
NPM1P17-201ENST00000479221 NPM3O75607 178 aaKnown RBP17.14■□□□□ 0.33
NPM1P17-201ENST00000479221 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
NPM1P17-201ENST00000479221 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
NPM1P17-201ENST00000479221 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
NPM1P17-201ENST00000479221 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
NPM1P17-201ENST00000479221 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
NPM1P17-201ENST00000479221 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
NPM1P17-201ENST00000479221 HOXD11P31277 338 aaPredicted RBP16.61■□□□□ 0.25
NPM1P17-201ENST00000479221 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
NPM1P17-201ENST00000479221 ZBTB22O15209 634 aa16.39■□□□□ 0.21
NPM1P17-201ENST00000479221 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
NPM1P17-201ENST00000479221 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
NPM1P17-201ENST00000479221 DCAF8L1A6NGE4 600 aa15.96■□□□□ 0.15
NPM1P17-201ENST00000479221 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
NPM1P17-201ENST00000479221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.11
NPM1P17-201ENST00000479221 ATXN8OSP0DMR3 200 aa15.61■□□□□ 0.09
NPM1P17-201ENST00000479221 U3KPZ7 1027 aaPredicted RBP15.61■□□□□ 0.09
NPM1P17-201ENST00000479221 POTEDQ86YR6 584 aa15.58■□□□□ 0.08
NPM1P17-201ENST00000479221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
NPM1P17-201ENST00000479221 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
NPM1P17-201ENST00000479221 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
NPM1P17-201ENST00000479221 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
NPM1P17-201ENST00000479221 RNF39Q9H2S5 420 aa15.28■□□□□ 0.04
NPM1P17-201ENST00000479221 APLP2Q06481 763 aa15.17■□□□□ 0.02
NPM1P17-201ENST00000479221 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
NPM1P17-201ENST00000479221 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
NPM1P17-201ENST00000479221 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
NPM1P17-201ENST00000479221 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
NPM1P17-201ENST00000479221 CAPN15O75808 1086 aa14.91□□□□□ -0.02
NPM1P17-201ENST00000479221 FKBP8Q14318 412 aa14.88□□□□□ -0.03
NPM1P17-201ENST00000479221 POLA2Q14181 598 aa14.8□□□□□ -0.04
NPM1P17-201ENST00000479221 MKRN4PQ13434 485 aaPredicted RBP14.77□□□□□ -0.05
NPM1P17-201ENST00000479221 ABCB7O75027 752 aa14.69□□□□□ -0.06
NPM1P17-201ENST00000479221 DSG3P32926 999 aa14.65□□□□□ -0.06
NPM1P17-201ENST00000479221 FBLN2P98095 1184 aa14.63□□□□□ -0.07
NPM1P17-201ENST00000479221 CACNB1Q02641 598 aaPredicted RBP14.56□□□□□ -0.08
NPM1P17-201ENST00000479221 ZBTB12Q9Y330 459 aaPredicted RBP14.55□□□□□ -0.08
NPM1P17-201ENST00000479221 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
NPM1P17-201ENST00000479221 PROM2Q8N271 834 aa14.43□□□□□ -0.1
NPM1P17-201ENST00000479221 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
NPM1P17-201ENST00000479221 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
NPM1P17-201ENST00000479221 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
NPM1P17-201ENST00000479221 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
NPM1P17-201ENST00000479221 FBXO3Q9UK99 471 aa14.21□□□□□ -0.13
NPM1P17-201ENST00000479221 SSUH2Q9Y2M2 353 aa14.2□□□□□ -0.14
NPM1P17-201ENST00000479221 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
NPM1P17-201ENST00000479221 RTN4Q9NQC3 1192 aaKnown RBP14.19□□□□□ -0.14
NPM1P17-201ENST00000479221 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
NPM1P17-201ENST00000479221 VASPP50552 380 aaPredicted RBP14.06□□□□□ -0.16
NPM1P17-201ENST00000479221 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
NPM1P17-201ENST00000479221 IFNLR1Q8IU57 520 aaPredicted RBP13.93□□□□□ -0.18
NPM1P17-201ENST00000479221 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
NPM1P17-201ENST00000479221 STAG3Q9UJ98 1225 aa13.89□□□□□ -0.19
NPM1P17-201ENST00000479221 AKT1S1Q96B36 256 aa13.83□□□□□ -0.2
NPM1P17-201ENST00000479221 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
NPM1P17-201ENST00000479221 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
NPM1P17-201ENST00000479221 SPDYE1Q8NFV5 336 aaPredicted RBP13.7□□□□□ -0.22
NPM1P17-201ENST00000479221 MIER1Q8N108 512 aa13.69□□□□□ -0.22
NPM1P17-201ENST00000479221 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
NPM1P17-201ENST00000479221 SPOCK2Q92563 424 aa13.65□□□□□ -0.22
NPM1P17-201ENST00000479221 PKD2Q13563 968 aa13.61□□□□□ -0.23
NPM1P17-201ENST00000479221 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
NPM1P17-201ENST00000479221 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
NPM1P17-201ENST00000479221 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
NPM1P17-201ENST00000479221 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
NPM1P17-201ENST00000479221 PRR29P0C7W0 189 aa13.52□□□□□ -0.25
NPM1P17-201ENST00000479221 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
NPM1P17-201ENST00000479221 MNX1P50219 401 aaPredicted RBP13.45□□□□□ -0.26
NPM1P17-201ENST00000479221 NUBP1P53384 320 aa13.4□□□□□ -0.26
NPM1P17-201ENST00000479221 ECM2O94769 699 aaPredicted RBP13.39□□□□□ -0.27
NPM1P17-201ENST00000479221 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
NPM1P17-201ENST00000479221 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
NPM1P17-201ENST00000479221 RGL2O15211 777 aa13.3□□□□□ -0.28
NPM1P17-201ENST00000479221 DCAF8L2P0C7V8 631 aa13.29□□□□□ -0.28
NPM1P17-201ENST00000479221 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
NPM1P17-201ENST00000479221 GSE1Q14687 1217 aa13.27□□□□□ -0.29
NPM1P17-201ENST00000479221 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
NPM1P17-201ENST00000479221 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
NPM1P17-201ENST00000479221 FXR2P51116 673 aaKnown RBP eCLIP13.24□□□□□ -0.29
NPM1P17-201ENST00000479221 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
NPM1P17-201ENST00000479221 DCAF8Q5TAQ9 597 aa13.21□□□□□ -0.29
NPM1P17-201ENST00000479221 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
NPM1P17-201ENST00000479221 FAM212AQ96EL1 285 aa13.21□□□□□ -0.29
NPM1P17-201ENST00000479221 FARP1Q9Y4F1 1045 aaPredicted RBP13.19□□□□□ -0.3
NPM1P17-201ENST00000479221 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms