RNA–Protein interactions for RNA: ENST00000479052.5

CCNL1-221, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 458 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-221ENST00000479052 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
CCNL1-221ENST00000479052 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
CCNL1-221ENST00000479052 SENP3Q9H4L4 574 aaPredicted RBP14.61□□□□□ -0.07
CCNL1-221ENST00000479052 PHF23Q9BUL5 403 aaPredicted RBP14.49□□□□□ -0.09
CCNL1-221ENST00000479052 FOXD1Q16676 465 aa13.71□□□□□ -0.21
CCNL1-221ENST00000479052 PLPPR3Q6T4P5 718 aa12.94□□□□□ -0.34
CCNL1-221ENST00000479052 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
CCNL1-221ENST00000479052 ADRA2BP18089 450 aa12.76□□□□□ -0.37
CCNL1-221ENST00000479052 MSH5O43196 834 aa12.75□□□□□ -0.37
CCNL1-221ENST00000479052 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
CCNL1-221ENST00000479052 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
CCNL1-221ENST00000479052 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
CCNL1-221ENST00000479052 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
CCNL1-221ENST00000479052 SCAF1Q9H7N4 1312 aaKnown RBP11.54□□□□□ -0.56
CCNL1-221ENST00000479052 PPP4R3CPQ6ZMV5 832 aa11.38□□□□□ -0.59
CCNL1-221ENST00000479052 HOXD11P31277 338 aaPredicted RBP11.19□□□□□ -0.62
CCNL1-221ENST00000479052 CNKSR2Q8WXI2 1034 aa11.14□□□□□ -0.63
CCNL1-221ENST00000479052 DCAF8L1A6NGE4 600 aa11.08□□□□□ -0.64
CCNL1-221ENST00000479052 RNF216Q9NWF9 866 aaPredicted RBP11.07□□□□□ -0.64
CCNL1-221ENST00000479052 CACNB1Q02641 598 aaPredicted RBP10.98□□□□□ -0.65
CCNL1-221ENST00000479052 RNF39Q9H2S5 420 aa10.94□□□□□ -0.66
CCNL1-221ENST00000479052 NCBP3Q53F19 620 aaKnown RBP10.84□□□□□ -0.67
CCNL1-221ENST00000479052 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
CCNL1-221ENST00000479052 DNAJC5BQ9UF47 199 aa10.77□□□□□ -0.69
CCNL1-221ENST00000479052 C1QBPQ07021 282 aaKnown RBP10.73□□□□□ -0.69
CCNL1-221ENST00000479052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.6□□□□□ -0.714e-10■■□□□ 13.9
CCNL1-221ENST00000479052 KCNA4P22459 653 aa10.56□□□□□ -0.72
CCNL1-221ENST00000479052 U3KPZ7 1027 aaPredicted RBP10.44□□□□□ -0.74
CCNL1-221ENST00000479052 SLC4A2P04920 1241 aa10.36□□□□□ -0.75
CCNL1-221ENST00000479052 SPINK5Q9NQ38 1064 aaPredicted RBP10.32□□□□□ -0.76
CCNL1-221ENST00000479052 DSG3P32926 999 aa10.24□□□□□ -0.77
CCNL1-221ENST00000479052 CAPN15O75808 1086 aa10.22□□□□□ -0.77
CCNL1-221ENST00000479052 TRHP20396 242 aaPredicted RBP10.07□□□□□ -0.8
CCNL1-221ENST00000479052 ABCB7O75027 752 aa10.02□□□□□ -0.81
CCNL1-221ENST00000479052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10□□□□□ -0.81
CCNL1-221ENST00000479052 HNRNPUL2Q1KMD3 747 aaKnown RBP10□□□□□ -0.81
CCNL1-221ENST00000479052 ZNF219Q9P2Y4 722 aaPredicted RBP10□□□□□ -0.81
CCNL1-221ENST00000479052 APLP2Q06481 763 aa9.98□□□□□ -0.81
CCNL1-221ENST00000479052 SAMD1Q6SPF0 538 aaPredicted RBP9.97□□□□□ -0.81
CCNL1-221ENST00000479052 MYCNP04198 464 aaPredicted RBP9.91□□□□□ -0.82
CCNL1-221ENST00000479052 SLC4A1APQ9BWU0 796 aaKnown RBP9.9□□□□□ -0.82
CCNL1-221ENST00000479052 POTEHQ6S545 545 aa9.84□□□□□ -0.83
CCNL1-221ENST00000479052 POLA2Q14181 598 aa9.81□□□□□ -0.84
CCNL1-221ENST00000479052 FOXD4L1Q9NU39 408 aa9.81□□□□□ -0.84
CCNL1-221ENST00000479052 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
CCNL1-221ENST00000479052 ZBTB22O15209 634 aa9.76□□□□□ -0.85
CCNL1-221ENST00000479052 RBM42Q9BTD8 480 aaKnown RBP9.66□□□□□ -0.86
CCNL1-221ENST00000479052 CHRDL2Q6WN34 429 aa9.54□□□□□ -0.88
CCNL1-221ENST00000479052 ZBTB12Q9Y330 459 aaPredicted RBP9.5□□□□□ -0.89
CCNL1-221ENST00000479052 ATXN8OSP0DMR3 200 aa9.49□□□□□ -0.89
CCNL1-221ENST00000479052 OSCARQ8IYS5 282 aa9.49□□□□□ -0.89
CCNL1-221ENST00000479052 AKT1S1Q96B36 256 aa9.48□□□□□ -0.89
CCNL1-221ENST00000479052 REM2Q8IYK8 340 aaPredicted RBP9.43□□□□□ -0.9
CCNL1-221ENST00000479052 MKRN4PQ13434 485 aaPredicted RBP9.35□□□□□ -0.91
CCNL1-221ENST00000479052 CSRNP3Q8WYN3 585 aa9.35□□□□□ -0.91
CCNL1-221ENST00000479052 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
CCNL1-221ENST00000479052 PIP4P2Q8N4L2 257 aa9.33□□□□□ -0.92
CCNL1-221ENST00000479052 EHMT2Q96KQ7 1210 aa9.31□□□□□ -0.92
CCNL1-221ENST00000479052 FXR2P51116 673 aaKnown RBP eCLIP9.27□□□□□ -0.93
CCNL1-221ENST00000479052 FBLN2P98095 1184 aa9.27□□□□□ -0.93
CCNL1-221ENST00000479052 SPDYE2BA6NHP3 402 aa9.26□□□□□ -0.93
CCNL1-221ENST00000479052 SPDYE6P0CI01 402 aa9.26□□□□□ -0.93
CCNL1-221ENST00000479052 SPDYE2Q495Y8 402 aa9.26□□□□□ -0.93
CCNL1-221ENST00000479052 SP7Q8TDD2 431 aaPredicted RBP9.19□□□□□ -0.94
CCNL1-221ENST00000479052 SSUH2Q9Y2M2 353 aa9.18□□□□□ -0.94
CCNL1-221ENST00000479052 ZNF692Q9BU19 519 aaPredicted RBP9.16□□□□□ -0.94
CCNL1-221ENST00000479052 EVX2Q03828 476 aa9.14□□□□□ -0.95
CCNL1-221ENST00000479052 HAX1O00165 279 aa9.12□□□□□ -0.95
CCNL1-221ENST00000479052 SPDYE1Q8NFV5 336 aaPredicted RBP9.1□□□□□ -0.95
CCNL1-221ENST00000479052 CLEC11AQ9Y240 323 aa9.1□□□□□ -0.95
CCNL1-221ENST00000479052 PRKAR2AP13861 404 aaKnown RBP9.07□□□□□ -0.96
CCNL1-221ENST00000479052 PABPN1Q86U42 306 aaKnown RBP eCLIP9.04□□□□□ -0.96
CCNL1-221ENST00000479052 CHADLQ6NUI6 762 aa8.99□□□□□ -0.97
CCNL1-221ENST00000479052 C19orf67A6NJJ6 358 aa8.97□□□□□ -0.97
CCNL1-221ENST00000479052 PRR29P0C7W0 189 aa8.94□□□□□ -0.98
CCNL1-221ENST00000479052 GABBR2O75899 941 aa8.85□□□□□ -0.99
CCNL1-221ENST00000479052 FARP1Q9Y4F1 1045 aaPredicted RBP8.83□□□□□ -1
CCNL1-221ENST00000479052 SPDYE4A6NLX3 237 aa8.8□□□□□ -1
CCNL1-221ENST00000479052 CREBZFQ9NS37 354 aa8.78□□□□□ -1
CCNL1-221ENST00000479052 CD44P16070 742 aaKnown RBP8.76□□□□□ -1.01
CCNL1-221ENST00000479052 POTEIP0CG38 1075 aa8.73□□□□□ -1.01
CCNL1-221ENST00000479052 STAG3Q9UJ98 1225 aa8.72□□□□□ -1.01
CCNL1-221ENST00000479052 MNX1P50219 401 aaPredicted RBP8.66□□□□□ -1.02
CCNL1-221ENST00000479052 PROM2Q8N271 834 aa8.64□□□□□ -1.03
CCNL1-221ENST00000479052 ZNF579Q8NAF0 562 aaKnown RBP8.64□□□□□ -1.03
CCNL1-221ENST00000479052 LHX8Q68G74 356 aa8.63□□□□□ -1.03
CCNL1-221ENST00000479052 ZRANB1Q9UGI0 708 aa8.63□□□□□ -1.03
CCNL1-221ENST00000479052 CLCN6P51797 869 aa8.59□□□□□ -1.03
CCNL1-221ENST00000479052 GALR2O43603 387 aaPredicted RBP8.58□□□□□ -1.04
CCNL1-221ENST00000479052 PHF12Q96QT6 1004 aa8.55□□□□□ -1.04
CCNL1-221ENST00000479052 DCBLD2Q96PD2 775 aa8.53□□□□□ -1.04
CCNL1-221ENST00000479052 NPM1P06748 294 aaKnown RBP eCLIP8.51□□□□□ -1.05
CCNL1-221ENST00000479052 PAK3O75914 559 aaPredicted RBP8.46□□□□□ -1.06
CCNL1-221ENST00000479052 PELP1Q8IZL8 1130 aaKnown RBP8.46□□□□□ -1.06
CCNL1-221ENST00000479052 POTEB2H3BUK9 544 aa8.45□□□□□ -1.06
CCNL1-221ENST00000479052 FKBP8Q14318 412 aa8.44□□□□□ -1.06
CCNL1-221ENST00000479052 MS4A3Q96HJ5 214 aa8.42□□□□□ -1.06
CCNL1-221ENST00000479052 TSPYL2Q9H2G4 693 aaPredicted RBP8.42□□□□□ -1.06
CCNL1-221ENST00000479052 CCDC61Q9Y6R9 512 aa8.41□□□□□ -1.06
CCNL1-221ENST00000479052 MIER1Q8N108 512 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms