RNA–Protein interactions for RNA: ENST00000478862.1

NCK1-206, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-206ENST00000478862 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
NCK1-206ENST00000478862 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
NCK1-206ENST00000478862 SENP3Q9H4L4 574 aaPredicted RBP20.43■□□□□ 0.86
NCK1-206ENST00000478862 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
NCK1-206ENST00000478862 FOXD1Q16676 465 aa18.92■□□□□ 0.62
NCK1-206ENST00000478862 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
NCK1-206ENST00000478862 MSH5O43196 834 aa17.84■□□□□ 0.45
NCK1-206ENST00000478862 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.44
NCK1-206ENST00000478862 ADRA2BP18089 450 aa17.64■□□□□ 0.41
NCK1-206ENST00000478862 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
NCK1-206ENST00000478862 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
NCK1-206ENST00000478862 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
NCK1-206ENST00000478862 MAPK8IP2Q13387 824 aaPredicted RBP16.16■□□□□ 0.18
NCK1-206ENST00000478862 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
NCK1-206ENST00000478862 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
NCK1-206ENST00000478862 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
NCK1-206ENST00000478862 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
NCK1-206ENST00000478862 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.08
NCK1-206ENST00000478862 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
NCK1-206ENST00000478862 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
NCK1-206ENST00000478862 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
NCK1-206ENST00000478862 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
NCK1-206ENST00000478862 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
NCK1-206ENST00000478862 NPM3O75607 178 aaKnown RBP15.01□□□□□ -0.01
NCK1-206ENST00000478862 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
NCK1-206ENST00000478862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.023e-8■■■□□ 14.9
NCK1-206ENST00000478862 KCNA4P22459 653 aa14.71□□□□□ -0.05
NCK1-206ENST00000478862 U3KPZ7 1027 aaPredicted RBP14.47□□□□□ -0.09
NCK1-206ENST00000478862 CAPN15O75808 1086 aa14.35□□□□□ -0.11
NCK1-206ENST00000478862 APLP2Q06481 763 aa14.31□□□□□ -0.12
NCK1-206ENST00000478862 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
NCK1-206ENST00000478862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
NCK1-206ENST00000478862 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
NCK1-206ENST00000478862 SPINK5Q9NQ38 1064 aaPredicted RBP14.25□□□□□ -0.13
NCK1-206ENST00000478862 DSG3P32926 999 aa14.17□□□□□ -0.14
NCK1-206ENST00000478862 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
NCK1-206ENST00000478862 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
NCK1-206ENST00000478862 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
NCK1-206ENST00000478862 SLC4A1APQ9BWU0 796 aaKnown RBP13.98□□□□□ -0.17
NCK1-206ENST00000478862 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
NCK1-206ENST00000478862 ABCB7O75027 752 aa13.94□□□□□ -0.18
NCK1-206ENST00000478862 FOXD4L1Q9NU39 408 aa13.8□□□□□ -0.2
NCK1-206ENST00000478862 POLA2Q14181 598 aa13.7□□□□□ -0.22
NCK1-206ENST00000478862 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
NCK1-206ENST00000478862 POTEHQ6S545 545 aa13.59□□□□□ -0.23
NCK1-206ENST00000478862 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
NCK1-206ENST00000478862 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
NCK1-206ENST00000478862 ZBTB22O15209 634 aa13.44□□□□□ -0.26
NCK1-206ENST00000478862 ATXN8OSP0DMR3 200 aa13.41□□□□□ -0.26
NCK1-206ENST00000478862 AKT1S1Q96B36 256 aa13.29□□□□□ -0.28
NCK1-206ENST00000478862 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
NCK1-206ENST00000478862 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
NCK1-206ENST00000478862 FBLN2P98095 1184 aa13.21□□□□□ -0.29
NCK1-206ENST00000478862 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
NCK1-206ENST00000478862 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
NCK1-206ENST00000478862 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
NCK1-206ENST00000478862 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
NCK1-206ENST00000478862 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
NCK1-206ENST00000478862 PIP4P2Q8N4L2 257 aa12.92□□□□□ -0.34
NCK1-206ENST00000478862 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
NCK1-206ENST00000478862 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
NCK1-206ENST00000478862 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
NCK1-206ENST00000478862 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
NCK1-206ENST00000478862 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
NCK1-206ENST00000478862 EHMT2Q96KQ7 1210 aa12.81□□□□□ -0.36
NCK1-206ENST00000478862 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
NCK1-206ENST00000478862 SSUH2Q9Y2M2 353 aa12.79□□□□□ -0.36
NCK1-206ENST00000478862 HAX1O00165 279 aa12.78□□□□□ -0.36
NCK1-206ENST00000478862 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
NCK1-206ENST00000478862 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
NCK1-206ENST00000478862 PRKAR2AP13861 404 aaKnown RBP12.67□□□□□ -0.38
NCK1-206ENST00000478862 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
NCK1-206ENST00000478862 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
NCK1-206ENST00000478862 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
NCK1-206ENST00000478862 EVX2Q03828 476 aa12.43□□□□□ -0.42
NCK1-206ENST00000478862 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
NCK1-206ENST00000478862 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
NCK1-206ENST00000478862 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
NCK1-206ENST00000478862 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
NCK1-206ENST00000478862 GABBR2O75899 941 aa12.26□□□□□ -0.45
NCK1-206ENST00000478862 CLCN6P51797 869 aa12.22□□□□□ -0.45
NCK1-206ENST00000478862 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
NCK1-206ENST00000478862 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
NCK1-206ENST00000478862 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.47
NCK1-206ENST00000478862 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
NCK1-206ENST00000478862 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
NCK1-206ENST00000478862 DCBLD2Q96PD2 775 aa12.05□□□□□ -0.48
NCK1-206ENST00000478862 PLEKHG5O94827 1062 aa12.01□□□□□ -0.49
NCK1-206ENST00000478862 PROM2Q8N271 834 aa12□□□□□ -0.49
NCK1-206ENST00000478862 LHX8Q68G74 356 aa11.98□□□□□ -0.49
NCK1-206ENST00000478862 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
NCK1-206ENST00000478862 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
NCK1-206ENST00000478862 MIER1Q8N108 512 aa11.9□□□□□ -0.5
NCK1-206ENST00000478862 PHF12Q96QT6 1004 aa11.88□□□□□ -0.51
NCK1-206ENST00000478862 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
NCK1-206ENST00000478862 TSPYL2Q9H2G4 693 aaPredicted RBP11.83□□□□□ -0.52
NCK1-206ENST00000478862 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
NCK1-206ENST00000478862 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
NCK1-206ENST00000478862 FKBP8Q14318 412 aa11.78□□□□□ -0.52
NCK1-206ENST00000478862 MS4A3Q96HJ5 214 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms