RNA–Protein interactions for RNA: ENST00000478482.1

MATN3-203, Transcript of matrilin 3, humanhuman

TSL 3

Gene MATN3, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-203ENST00000478482 AEBP2Q6ZN18 517 aaPredicted RBP28.45■■■□□ 2.14
MATN3-203ENST00000478482 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
MATN3-203ENST00000478482 SENP3Q9H4L4 574 aaPredicted RBP24.25■■□□□ 1.47
MATN3-203ENST00000478482 PHF23Q9BUL5 403 aaPredicted RBP23.93■■□□□ 1.42
MATN3-203ENST00000478482 FOXD1Q16676 465 aa22.62■■□□□ 1.21
MATN3-203ENST00000478482 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
MATN3-203ENST00000478482 MSH5O43196 834 aa21.17■□□□□ 0.98
MATN3-203ENST00000478482 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
MATN3-203ENST00000478482 PIAS4Q8N2W9 510 aaPredicted RBP21.1■□□□□ 0.97
MATN3-203ENST00000478482 ADRA2BP18089 450 aa21.03■□□□□ 0.96
MATN3-203ENST00000478482 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
MATN3-203ENST00000478482 MAPK8IP2Q13387 824 aaPredicted RBP19.34■□□□□ 0.69
MATN3-203ENST00000478482 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
MATN3-203ENST00000478482 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
MATN3-203ENST00000478482 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
MATN3-203ENST00000478482 HOXD11P31277 338 aaPredicted RBP18.52■□□□□ 0.56
MATN3-203ENST00000478482 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
MATN3-203ENST00000478482 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
MATN3-203ENST00000478482 RNF216Q9NWF9 866 aaPredicted RBP18.36■□□□□ 0.53
MATN3-203ENST00000478482 CACNB1Q02641 598 aaPredicted RBP18.17■□□□□ 0.5
MATN3-203ENST00000478482 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
MATN3-203ENST00000478482 RNF39Q9H2S5 420 aa18.08■□□□□ 0.48
MATN3-203ENST00000478482 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
MATN3-203ENST00000478482 NPM3O75607 178 aaKnown RBP17.86■□□□□ 0.45
MATN3-203ENST00000478482 C1QBPQ07021 282 aaKnown RBP17.8■□□□□ 0.44
MATN3-203ENST00000478482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.41
MATN3-203ENST00000478482 KCNA4P22459 653 aa17.48■□□□□ 0.39
MATN3-203ENST00000478482 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
MATN3-203ENST00000478482 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
MATN3-203ENST00000478482 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
MATN3-203ENST00000478482 CAPN15O75808 1086 aa16.95■□□□□ 0.3
MATN3-203ENST00000478482 DSG3P32926 999 aa16.91■□□□□ 0.3
MATN3-203ENST00000478482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
MATN3-203ENST00000478482 APLP2Q06481 763 aa16.73■□□□□ 0.27
MATN3-203ENST00000478482 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
MATN3-203ENST00000478482 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
MATN3-203ENST00000478482 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
MATN3-203ENST00000478482 SAMD1Q6SPF0 538 aaPredicted RBP16.65■□□□□ 0.26
MATN3-203ENST00000478482 ABCB7O75027 752 aa16.57■□□□□ 0.24
MATN3-203ENST00000478482 MYCNP04198 464 aaPredicted RBP16.51■□□□□ 0.23
MATN3-203ENST00000478482 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
MATN3-203ENST00000478482 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
MATN3-203ENST00000478482 POTEHQ6S545 545 aa16.24■□□□□ 0.19
MATN3-203ENST00000478482 POLA2Q14181 598 aa16.23■□□□□ 0.19
MATN3-203ENST00000478482 ATF5Q9Y2D1 282 aaPredicted RBP16.15■□□□□ 0.18
MATN3-203ENST00000478482 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
MATN3-203ENST00000478482 ZBTB22O15209 634 aa16.09■□□□□ 0.17
MATN3-203ENST00000478482 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
MATN3-203ENST00000478482 ATXN8OSP0DMR3 200 aa15.83■□□□□ 0.12
MATN3-203ENST00000478482 CHRDL2Q6WN34 429 aa15.78■□□□□ 0.12
MATN3-203ENST00000478482 AKT1S1Q96B36 256 aa15.75■□□□□ 0.11
MATN3-203ENST00000478482 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
MATN3-203ENST00000478482 REM2Q8IYK8 340 aaPredicted RBP15.6■□□□□ 0.09
MATN3-203ENST00000478482 FBLN2P98095 1184 aa15.48■□□□□ 0.07
MATN3-203ENST00000478482 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
MATN3-203ENST00000478482 SPDYE2BA6NHP3 402 aa15.42■□□□□ 0.06
MATN3-203ENST00000478482 SPDYE6P0CI01 402 aa15.42■□□□□ 0.06
MATN3-203ENST00000478482 MKRN4PQ13434 485 aaPredicted RBP15.42■□□□□ 0.06
MATN3-203ENST00000478482 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
MATN3-203ENST00000478482 NISCHQ9Y2I1 1504 aa15.41■□□□□ 0.06
MATN3-203ENST00000478482 PIP4P2Q8N4L2 257 aa15.4■□□□□ 0.06
MATN3-203ENST00000478482 FXR2P51116 673 aaKnown RBP eCLIP15.32■□□□□ 0.04
MATN3-203ENST00000478482 CSRNP3Q8WYN3 585 aa15.3■□□□□ 0.04
MATN3-203ENST00000478482 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
MATN3-203ENST00000478482 SSUH2Q9Y2M2 353 aa15.24■□□□□ 0.03
MATN3-203ENST00000478482 SP7Q8TDD2 431 aaPredicted RBP15.2■□□□□ 0.02
MATN3-203ENST00000478482 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
MATN3-203ENST00000478482 SPDYE1Q8NFV5 336 aaPredicted RBP15.15■□□□□ 0.02
MATN3-203ENST00000478482 HAX1O00165 279 aa15.11■□□□□ 0.01
MATN3-203ENST00000478482 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
MATN3-203ENST00000478482 PRKAR2AP13861 404 aaKnown RBP15.02■□□□□ -0
MATN3-203ENST00000478482 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
MATN3-203ENST00000478482 EVX2Q03828 476 aa14.96□□□□□ -0.01
MATN3-203ENST00000478482 PRR29P0C7W0 189 aa14.85□□□□□ -0.03
MATN3-203ENST00000478482 CHADLQ6NUI6 762 aa14.84□□□□□ -0.03
MATN3-203ENST00000478482 C19orf67A6NJJ6 358 aa14.83□□□□□ -0.04
MATN3-203ENST00000478482 SPDYE4A6NLX3 237 aa14.63□□□□□ -0.07
MATN3-203ENST00000478482 FARP1Q9Y4F1 1045 aaPredicted RBP14.63□□□□□ -0.07
MATN3-203ENST00000478482 GABBR2O75899 941 aa14.6□□□□□ -0.07
MATN3-203ENST00000478482 STAG3Q9UJ98 1225 aa14.57□□□□□ -0.08
MATN3-203ENST00000478482 CD44P16070 742 aaKnown RBP14.54□□□□□ -0.08
MATN3-203ENST00000478482 CREBZFQ9NS37 354 aa14.51□□□□□ -0.09
MATN3-203ENST00000478482 CLCN6P51797 869 aa14.37□□□□□ -0.11
MATN3-203ENST00000478482 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
MATN3-203ENST00000478482 PROM2Q8N271 834 aa14.33□□□□□ -0.12
MATN3-203ENST00000478482 POTEIP0CG38 1075 aa14.32□□□□□ -0.12
MATN3-203ENST00000478482 ZRANB1Q9UGI0 708 aa14.32□□□□□ -0.12
MATN3-203ENST00000478482 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
MATN3-203ENST00000478482 LHX8Q68G74 356 aa14.25□□□□□ -0.13
MATN3-203ENST00000478482 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
MATN3-203ENST00000478482 PAK3O75914 559 aaPredicted RBP14.18□□□□□ -0.14
MATN3-203ENST00000478482 DCBLD2Q96PD2 775 aa14.17□□□□□ -0.14
MATN3-203ENST00000478482 GALR2O43603 387 aaPredicted RBP14.16□□□□□ -0.14
MATN3-203ENST00000478482 PHF12Q96QT6 1004 aa14.13□□□□□ -0.15
MATN3-203ENST00000478482 MS4A3Q96HJ5 214 aa13.95□□□□□ -0.18
MATN3-203ENST00000478482 TSPYL2Q9H2G4 693 aaPredicted RBP13.95□□□□□ -0.18
MATN3-203ENST00000478482 MIER1Q8N108 512 aa13.94□□□□□ -0.18
MATN3-203ENST00000478482 CCDC61Q9Y6R9 512 aa13.93□□□□□ -0.18
MATN3-203ENST00000478482 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
MATN3-203ENST00000478482 PELP1Q8IZL8 1130 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms