RNA–Protein interactions for RNA: ENST00000478344.6

EXD3-206, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 2

Gene EXD3, Length 2,932 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-206ENST00000478344 NISCHQ9Y2I1 1504 aa29.94■■■□□ 2.38
EXD3-206ENST00000478344 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
EXD3-206ENST00000478344 SUPT5HO00267 1087 aaKnown RBP25.38■■□□□ 1.65
EXD3-206ENST00000478344 ZCCHC6Q5VYS8 1495 aaKnown RBP25.32■■□□□ 1.64
EXD3-206ENST00000478344 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
EXD3-206ENST00000478344 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
EXD3-206ENST00000478344 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.53
EXD3-206ENST00000478344 MYO15BQ96JP2 1530 aa24.54■■□□□ 1.52
EXD3-206ENST00000478344 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
EXD3-206ENST00000478344 PCGF6Q9BYE7 350 aa24.04■■□□□ 1.44
EXD3-206ENST00000478344 LOC105371045A0A1W2PR82 267 aa24.01■■□□□ 1.43
EXD3-206ENST00000478344 HRCP23327 699 aa24.01■■□□□ 1.43
EXD3-206ENST00000478344 SCRIBQ14160 1630 aa23.89■■□□□ 1.41
EXD3-206ENST00000478344 ABCC9O60706 1549 aa23.88■■□□□ 1.41
EXD3-206ENST00000478344 RSF1Q96T23 1441 aaPredicted RBP23.79■■□□□ 1.4
EXD3-206ENST00000478344 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
EXD3-206ENST00000478344 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
EXD3-206ENST00000478344 RB1CC1Q8TDY2 1594 aa23.53■■□□□ 1.36
EXD3-206ENST00000478344 FAM9AQ8IZU1 332 aaPredicted RBP23.48■■□□□ 1.35
EXD3-206ENST00000478344 TRIM26Q12899 539 aaPredicted RBP23.47■■□□□ 1.35
EXD3-206ENST00000478344 CECR2Q9BXF3 1484 aa23.45■■□□□ 1.34
EXD3-206ENST00000478344 NACADO15069 1562 aa23.41■■□□□ 1.34
EXD3-206ENST00000478344 EHMT2Q96KQ7 1210 aa23.36■■□□□ 1.33
EXD3-206ENST00000478344 MROH2BQ7Z745 1585 aa23.34■■□□□ 1.33
EXD3-206ENST00000478344 WIZO95785 1651 aa23.21■■□□□ 1.31
EXD3-206ENST00000478344 BAZ1AQ9NRL2 1556 aaPredicted RBP22.98■■□□□ 1.27
EXD3-206ENST00000478344 ZEB1P37275 1124 aaPredicted RBP22.92■■□□□ 1.26
EXD3-206ENST00000478344 EIF4G1Q04637 1599 aaKnown RBP22.83■■□□□ 1.24
EXD3-206ENST00000478344 ABCC8Q09428 1581 aa22.77■■□□□ 1.24
EXD3-206ENST00000478344 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
EXD3-206ENST00000478344 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
EXD3-206ENST00000478344 SMARCA4P51532 1647 aa22.76■■□□□ 1.23
EXD3-206ENST00000478344 UNC13AQ9UPW8 1703 aa22.7■■□□□ 1.22
EXD3-206ENST00000478344 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
EXD3-206ENST00000478344 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
EXD3-206ENST00000478344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.61■■□□□ 1.21
EXD3-206ENST00000478344 TTBK1Q5TCY1 1321 aaPredicted RBP22.6■■□□□ 1.21
EXD3-206ENST00000478344 SOGA1O94964 1423 aa22.6■■□□□ 1.21
EXD3-206ENST00000478344 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.2
EXD3-206ENST00000478344 RUSC2Q8N2Y8 1516 aa22.5■■□□□ 1.19
EXD3-206ENST00000478344 CEP162Q5TB80 1403 aa22.5■■□□□ 1.19
EXD3-206ENST00000478344 CSRNP3Q8WYN3 585 aa22.48■■□□□ 1.19
EXD3-206ENST00000478344 UBTFP17480 764 aaKnown RBP22.47■■□□□ 1.19
EXD3-206ENST00000478344 BICRAQ9NZM4 1560 aa22.44■■□□□ 1.18
EXD3-206ENST00000478344 TNIKQ9UKE5 1360 aa22.42■■□□□ 1.18
EXD3-206ENST00000478344 WRNQ14191 1432 aaPredicted RBP eCLIP22.42■■□□□ 1.18
EXD3-206ENST00000478344 PELP1Q8IZL8 1130 aaKnown RBP22.39■■□□□ 1.18
EXD3-206ENST00000478344 EEA1Q15075 1411 aa22.35■■□□□ 1.17
EXD3-206ENST00000478344 PEG3Q9GZU2 1588 aa22.26■■□□□ 1.15
EXD3-206ENST00000478344 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
EXD3-206ENST00000478344 SCAF1Q9H7N4 1312 aaKnown RBP22.22■■□□□ 1.15
EXD3-206ENST00000478344 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.15
EXD3-206ENST00000478344 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
EXD3-206ENST00000478344 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
EXD3-206ENST00000478344 CEP164Q9UPV0 1460 aa22.12■■□□□ 1.13
EXD3-206ENST00000478344 DIEXFQ68CQ4 756 aaKnown RBP22.11■■□□□ 1.13
EXD3-206ENST00000478344 RANGAP1P46060 587 aaPredicted RBP22.1■■□□□ 1.13
EXD3-206ENST00000478344 CLIP1P30622 1438 aa22.06■■□□□ 1.12
EXD3-206ENST00000478344 HNRNPUL2Q1KMD3 747 aaKnown RBP22.05■■□□□ 1.12
EXD3-206ENST00000478344 KIF21BO75037 1637 aa22.03■■□□□ 1.12
EXD3-206ENST00000478344 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.11
EXD3-206ENST00000478344 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
EXD3-206ENST00000478344 ACIN1Q9UKV3 1341 aaKnown RBP21.95■■□□□ 1.1
EXD3-206ENST00000478344 APLP2Q06481 763 aa21.94■■□□□ 1.1
EXD3-206ENST00000478344 VPS8Q8N3P4 1428 aa21.94■■□□□ 1.1
EXD3-206ENST00000478344 ZNF316A6NFI3 1004 aaPredicted RBP21.89■■□□□ 1.09
EXD3-206ENST00000478344 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
EXD3-206ENST00000478344 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
EXD3-206ENST00000478344 BIVM-ERCC5R4GMW8 1640 aa21.75■■□□□ 1.07
EXD3-206ENST00000478344 GTF3C3Q9Y5Q9 886 aa21.75■■□□□ 1.07
EXD3-206ENST00000478344 PRXQ9BXM0 1461 aa21.73■■□□□ 1.07
EXD3-206ENST00000478344 NCAPD3P42695 1498 aa21.72■■□□□ 1.07
EXD3-206ENST00000478344 CUX1P39880 1505 aa21.7■■□□□ 1.06
EXD3-206ENST00000478344 KANK4Q5T7N3 995 aaPredicted RBP21.69■■□□□ 1.06
EXD3-206ENST00000478344 YTHDC1Q96MU7 727 aaKnown RBP21.67■■□□□ 1.06
EXD3-206ENST00000478344 ERICH3Q5RHP9 1530 aa21.67■■□□□ 1.06
EXD3-206ENST00000478344 HMGXB3Q12766 1538 aa21.66■■□□□ 1.06
EXD3-206ENST00000478344 ARAP1Q96P48 1450 aa21.66■■□□□ 1.06
EXD3-206ENST00000478344 MIER1Q8N108 512 aa21.65■■□□□ 1.06
EXD3-206ENST00000478344 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
EXD3-206ENST00000478344 CFTRP13569 1480 aa21.59■■□□□ 1.05
EXD3-206ENST00000478344 MYT1Q01538 1121 aa21.57■■□□□ 1.04
EXD3-206ENST00000478344 DHX57Q6P158 1386 aaKnown RBP21.52■■□□□ 1.04
EXD3-206ENST00000478344 ARHGAP35Q9NRY4 1499 aa21.48■■□□□ 1.03
EXD3-206ENST00000478344 ITGAEP38570 1179 aa21.47■■□□□ 1.03
EXD3-206ENST00000478344 CLSPNQ9HAW4 1339 aa21.44■■□□□ 1.02
EXD3-206ENST00000478344 CUX2O14529 1486 aa21.43■■□□□ 1.02
EXD3-206ENST00000478344 RRBP1Q9P2E9 1410 aaKnown RBP21.43■■□□□ 1.02
EXD3-206ENST00000478344 IGF1RP08069 1367 aa21.43■■□□□ 1.02
EXD3-206ENST00000478344 CCNB3Q8WWL7 1395 aa21.39■■□□□ 1.01
EXD3-206ENST00000478344 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
EXD3-206ENST00000478344 CARMIL1Q5VZK9 1371 aa21.34■■□□□ 1.01
EXD3-206ENST00000478344 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
EXD3-206ENST00000478344 P3H3Q8IVL6 736 aa21.29■■□□□ 1
EXD3-206ENST00000478344 PRDM2Q13029 1718 aa21.27■■□□□ 1
EXD3-206ENST00000478344 ATP1B4Q9UN42 357 aaPredicted RBP21.25■□□□□ 0.99
EXD3-206ENST00000478344 RAB3GAP2Q9H2M9 1393 aa21.23■□□□□ 0.99
EXD3-206ENST00000478344 TIAM1Q13009 1591 aa21.21■□□□□ 0.99
EXD3-206ENST00000478344 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
EXD3-206ENST00000478344 PHLDB1Q86UU1 1377 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms