RNA–Protein interactions for RNA: ENST00000478070.1

MDM2-217, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-217ENST00000478070 AEBP2Q6ZN18 517 aaPredicted RBP19.82■□□□□ 0.76
MDM2-217ENST00000478070 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
MDM2-217ENST00000478070 PHF23Q9BUL5 403 aaPredicted RBP17.28■□□□□ 0.36
MDM2-217ENST00000478070 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
MDM2-217ENST00000478070 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
MDM2-217ENST00000478070 FOXD1Q16676 465 aa15.54■□□□□ 0.08
MDM2-217ENST00000478070 ADRA2BP18089 450 aa15.18■□□□□ 0.02
MDM2-217ENST00000478070 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
MDM2-217ENST00000478070 PIAS4Q8N2W9 510 aaPredicted RBP14.76□□□□□ -0.05
MDM2-217ENST00000478070 MSH5O43196 834 aa14.26□□□□□ -0.13
MDM2-217ENST00000478070 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
MDM2-217ENST00000478070 KCNA4P22459 653 aa14.18□□□□□ -0.14
MDM2-217ENST00000478070 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
MDM2-217ENST00000478070 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
MDM2-217ENST00000478070 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
MDM2-217ENST00000478070 NPM3O75607 178 aaKnown RBP13.7□□□□□ -0.22
MDM2-217ENST00000478070 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
MDM2-217ENST00000478070 SLC4A1APQ9BWU0 796 aaKnown RBP13.57□□□□□ -0.24
MDM2-217ENST00000478070 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
MDM2-217ENST00000478070 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
MDM2-217ENST00000478070 RNF216Q9NWF9 866 aaPredicted RBP13.41□□□□□ -0.26
MDM2-217ENST00000478070 HOXD11P31277 338 aaPredicted RBP13.27□□□□□ -0.29
MDM2-217ENST00000478070 DNAJC5BQ9UF47 199 aa13.24□□□□□ -0.29
MDM2-217ENST00000478070 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
MDM2-217ENST00000478070 POTEDQ86YR6 584 aa13.06□□□□□ -0.32
MDM2-217ENST00000478070 ZBTB22O15209 634 aa13.04□□□□□ -0.32
MDM2-217ENST00000478070 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
MDM2-217ENST00000478070 DCAF8L1A6NGE4 600 aa12.9□□□□□ -0.34
MDM2-217ENST00000478070 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
MDM2-217ENST00000478070 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
MDM2-217ENST00000478070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.381e-8■■□□□ 11.6
MDM2-217ENST00000478070 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
MDM2-217ENST00000478070 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
MDM2-217ENST00000478070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
MDM2-217ENST00000478070 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
MDM2-217ENST00000478070 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
MDM2-217ENST00000478070 ATF5Q9Y2D1 282 aaPredicted RBP12.28□□□□□ -0.44
MDM2-217ENST00000478070 APLP2Q06481 763 aa12.27□□□□□ -0.45
MDM2-217ENST00000478070 RNF39Q9H2S5 420 aa12.23□□□□□ -0.45
MDM2-217ENST00000478070 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
MDM2-217ENST00000478070 ZNF219Q9P2Y4 722 aaPredicted RBP12.09□□□□□ -0.47
MDM2-217ENST00000478070 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
MDM2-217ENST00000478070 CAPN15O75808 1086 aa12.02□□□□□ -0.49
MDM2-217ENST00000478070 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
MDM2-217ENST00000478070 FKBP8Q14318 412 aa11.93□□□□□ -0.5
MDM2-217ENST00000478070 POLA2Q14181 598 aa11.88□□□□□ -0.51
MDM2-217ENST00000478070 ABCB7O75027 752 aa11.81□□□□□ -0.52
MDM2-217ENST00000478070 FBLN2P98095 1184 aa11.8□□□□□ -0.52
MDM2-217ENST00000478070 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
MDM2-217ENST00000478070 ZBTB12Q9Y330 459 aaPredicted RBP11.74□□□□□ -0.53
MDM2-217ENST00000478070 CACNB1Q02641 598 aaPredicted RBP11.73□□□□□ -0.53
MDM2-217ENST00000478070 DSG3P32926 999 aa11.72□□□□□ -0.53
MDM2-217ENST00000478070 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
MDM2-217ENST00000478070 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
MDM2-217ENST00000478070 PROM2Q8N271 834 aa11.48□□□□□ -0.57
MDM2-217ENST00000478070 FBXO3Q9UK99 471 aa11.44□□□□□ -0.58
MDM2-217ENST00000478070 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
MDM2-217ENST00000478070 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
MDM2-217ENST00000478070 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
MDM2-217ENST00000478070 ZNF692Q9BU19 519 aaPredicted RBP11.41□□□□□ -0.58
MDM2-217ENST00000478070 AMER1Q5JTC6 1135 aaPredicted RBP11.36□□□□□ -0.59
MDM2-217ENST00000478070 SSUH2Q9Y2M2 353 aa11.35□□□□□ -0.59
MDM2-217ENST00000478070 RTN4Q9NQC3 1192 aaKnown RBP11.32□□□□□ -0.6
MDM2-217ENST00000478070 VASPP50552 380 aaPredicted RBP11.28□□□□□ -0.6
MDM2-217ENST00000478070 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
MDM2-217ENST00000478070 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
MDM2-217ENST00000478070 STAG3Q9UJ98 1225 aa11.17□□□□□ -0.62
MDM2-217ENST00000478070 IFNLR1Q8IU57 520 aaPredicted RBP11.12□□□□□ -0.63
MDM2-217ENST00000478070 AKT1S1Q96B36 256 aa11.1□□□□□ -0.63
MDM2-217ENST00000478070 PLCD3Q8N3E9 789 aa11.07□□□□□ -0.64
MDM2-217ENST00000478070 MIER1Q8N108 512 aa11.03□□□□□ -0.64
MDM2-217ENST00000478070 KLHL34Q8N239 644 aa11.03□□□□□ -0.64
MDM2-217ENST00000478070 SPDYE1Q8NFV5 336 aaPredicted RBP11.03□□□□□ -0.64
MDM2-217ENST00000478070 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
MDM2-217ENST00000478070 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
MDM2-217ENST00000478070 SPOCK2Q92563 424 aa10.97□□□□□ -0.65
MDM2-217ENST00000478070 CLEC11AQ9Y240 323 aa10.96□□□□□ -0.65
MDM2-217ENST00000478070 ZBTB47Q9UFB7 747 aaPredicted RBP10.92□□□□□ -0.66
MDM2-217ENST00000478070 PRR29P0C7W0 189 aa10.89□□□□□ -0.67
MDM2-217ENST00000478070 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
MDM2-217ENST00000478070 PKD2Q13563 968 aa10.85□□□□□ -0.67
MDM2-217ENST00000478070 CREBZFQ9NS37 354 aa10.8□□□□□ -0.68
MDM2-217ENST00000478070 DCAF8L2P0C7V8 631 aa10.77□□□□□ -0.69
MDM2-217ENST00000478070 ECM2O94769 699 aaPredicted RBP10.76□□□□□ -0.69
MDM2-217ENST00000478070 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
MDM2-217ENST00000478070 MNX1P50219 401 aaPredicted RBP10.71□□□□□ -0.69
MDM2-217ENST00000478070 NUBP1P53384 320 aa10.7□□□□□ -0.7
MDM2-217ENST00000478070 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
MDM2-217ENST00000478070 GSE1Q14687 1217 aa10.68□□□□□ -0.7
MDM2-217ENST00000478070 NPM1P06748 294 aaKnown RBP eCLIP10.66□□□□□ -0.7
MDM2-217ENST00000478070 TRIM41Q8WV44 630 aa10.66□□□□□ -0.7
MDM2-217ENST00000478070 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
MDM2-217ENST00000478070 FAM212AQ96EL1 285 aa10.65□□□□□ -0.7
MDM2-217ENST00000478070 DCAF8Q5TAQ9 597 aa10.64□□□□□ -0.71
MDM2-217ENST00000478070 RGL2O15211 777 aa10.63□□□□□ -0.71
MDM2-217ENST00000478070 CHRDL2Q6WN34 429 aa10.61□□□□□ -0.71
MDM2-217ENST00000478070 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
MDM2-217ENST00000478070 RASEFQ8IZ41 740 aa10.6□□□□□ -0.71
MDM2-217ENST00000478070 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.71
MDM2-217ENST00000478070 FARP1Q9Y4F1 1045 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms