RNA–Protein interactions for RNA: ENST00000478065.5

ACAP3-210, Transcript of ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, humanhuman

TSL 3

Gene ACAP3, Length 2,393 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3-210ENST00000478065 NISCHQ9Y2I1 1504 aa39.83■■■■□ 3.97
ACAP3-210ENST00000478065 SHROOM4Q9ULL8 1493 aa34.13■■■■□ 3.05
ACAP3-210ENST00000478065 CCDC180Q9P1Z9 1646 aa33.77■■■■□ 3
ACAP3-210ENST00000478065 ZCCHC6Q5VYS8 1495 aaKnown RBP33.75■■■□□ 2.99
ACAP3-210ENST00000478065 SUPT5HO00267 1087 aaKnown RBP33.62■■■□□ 2.97
ACAP3-210ENST00000478065 DCAF8L2P0C7V8 631 aa33.06■■■□□ 2.88
ACAP3-210ENST00000478065 CHIC1Q5VXU3 224 aa32.85■■■□□ 2.85
ACAP3-210ENST00000478065 MYO15BQ96JP2 1530 aa32.78■■■□□ 2.84
ACAP3-210ENST00000478065 DCAF1Q9Y4B6 1507 aa32.69■■■□□ 2.82
ACAP3-210ENST00000478065 HRCP23327 699 aa32.31■■■□□ 2.76
ACAP3-210ENST00000478065 PCGF6Q9BYE7 350 aa32.09■■■□□ 2.73
ACAP3-210ENST00000478065 ABCC9O60706 1549 aa31.98■■■□□ 2.71
ACAP3-210ENST00000478065 LOC105371045A0A1W2PR82 267 aa31.88■■■□□ 2.69
ACAP3-210ENST00000478065 SCRIBQ14160 1630 aa31.73■■■□□ 2.67
ACAP3-210ENST00000478065 RSF1Q96T23 1441 aaPredicted RBP31.63■■■□□ 2.65
ACAP3-210ENST00000478065 PPARGC1BQ86YN6 1023 aaKnown RBP31.56■■■□□ 2.64
ACAP3-210ENST00000478065 TRIM26Q12899 539 aaPredicted RBP31.45■■■□□ 2.63
ACAP3-210ENST00000478065 NACADO15069 1562 aa31.41■■■□□ 2.62
ACAP3-210ENST00000478065 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
ACAP3-210ENST00000478065 TRIM41Q8WV44 630 aa31.31■■■□□ 2.6
ACAP3-210ENST00000478065 CECR2Q9BXF3 1484 aa31.05■■■□□ 2.56
ACAP3-210ENST00000478065 FAM9AQ8IZU1 332 aaPredicted RBP31.03■■■□□ 2.56
ACAP3-210ENST00000478065 MROH2BQ7Z745 1585 aa30.98■■■□□ 2.55
ACAP3-210ENST00000478065 ZEB1P37275 1124 aaPredicted RBP30.89■■■□□ 2.54
ACAP3-210ENST00000478065 WIZO95785 1651 aa30.84■■■□□ 2.53
ACAP3-210ENST00000478065 EHMT2Q96KQ7 1210 aa30.74■■■□□ 2.51
ACAP3-210ENST00000478065 BAZ1AQ9NRL2 1556 aaPredicted RBP30.66■■■□□ 2.5
ACAP3-210ENST00000478065 UNC13AQ9UPW8 1703 aa30.59■■■□□ 2.49
ACAP3-210ENST00000478065 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
ACAP3-210ENST00000478065 TOP2AP11388 1531 aaKnown RBP30.35■■■□□ 2.45
ACAP3-210ENST00000478065 BICRAQ9NZM4 1560 aa30.29■■■□□ 2.44
ACAP3-210ENST00000478065 SMARCA4P51532 1647 aa30.28■■■□□ 2.44
ACAP3-210ENST00000478065 ABCC8Q09428 1581 aa30.24■■■□□ 2.43
ACAP3-210ENST00000478065 CCDC88BA6NC98 1476 aa30.24■■■□□ 2.43
ACAP3-210ENST00000478065 SMARCA2P51531 1590 aa30.2■■■□□ 2.42
ACAP3-210ENST00000478065 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.426e-6■■□□□ 12.8
ACAP3-210ENST00000478065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.12■■■□□ 2.41
ACAP3-210ENST00000478065 WRNQ14191 1432 aaPredicted RBP eCLIP30.08■■■□□ 2.414e-7■■■□□ 16.7
ACAP3-210ENST00000478065 CCER1Q8TC90 406 aaPredicted RBP30.06■■■□□ 2.4
ACAP3-210ENST00000478065 SOGA1O94964 1423 aa30.01■■■□□ 2.39
ACAP3-210ENST00000478065 CEP162Q5TB80 1403 aa30.01■■■□□ 2.39
ACAP3-210ENST00000478065 TNIKQ9UKE5 1360 aa29.96■■■□□ 2.39
ACAP3-210ENST00000478065 SCAF1Q9H7N4 1312 aaKnown RBP29.93■■■□□ 2.38
ACAP3-210ENST00000478065 EEA1Q15075 1411 aa29.92■■■□□ 2.38
ACAP3-210ENST00000478065 CSRNP3Q8WYN3 585 aa29.89■■■□□ 2.37
ACAP3-210ENST00000478065 RUSC2Q8N2Y8 1516 aa29.85■■■□□ 2.37
ACAP3-210ENST00000478065 TTBK1Q5TCY1 1321 aaPredicted RBP29.83■■■□□ 2.37
ACAP3-210ENST00000478065 UBTFP17480 764 aaKnown RBP29.78■■■□□ 2.36
ACAP3-210ENST00000478065 GOLGA3Q08378 1498 aa29.72■■■□□ 2.35
ACAP3-210ENST00000478065 PEG3Q9GZU2 1588 aa29.7■■■□□ 2.34
ACAP3-210ENST00000478065 PELP1Q8IZL8 1130 aaKnown RBP29.64■■■□□ 2.34
ACAP3-210ENST00000478065 DIEXFQ68CQ4 756 aaKnown RBP29.63■■■□□ 2.33
ACAP3-210ENST00000478065 ACIN1Q9UKV3 1341 aaKnown RBP29.57■■■□□ 2.32
ACAP3-210ENST00000478065 SYNJ1O43426 1573 aa29.55■■■□□ 2.32
ACAP3-210ENST00000478065 CEP164Q9UPV0 1460 aa29.53■■■□□ 2.32
ACAP3-210ENST00000478065 KIF21BO75037 1637 aa29.51■■■□□ 2.31
ACAP3-210ENST00000478065 NEUROD1Q13562 356 aa29.5■■■□□ 2.31
ACAP3-210ENST00000478065 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
ACAP3-210ENST00000478065 BAZ1BQ9UIG0 1483 aaKnown RBP29.43■■■□□ 2.3
ACAP3-210ENST00000478065 CLIP1P30622 1438 aa29.4■■■□□ 2.3
ACAP3-210ENST00000478065 CENPBP07199 599 aaPredicted RBP29.37■■■□□ 2.29
ACAP3-210ENST00000478065 ZNF316A6NFI3 1004 aaPredicted RBP29.35■■■□□ 2.29
ACAP3-210ENST00000478065 VPS8Q8N3P4 1428 aa29.31■■■□□ 2.28
ACAP3-210ENST00000478065 HNRNPUL2Q1KMD3 747 aaKnown RBP29.28■■■□□ 2.28
ACAP3-210ENST00000478065 RAPGEF2Q9Y4G8 1499 aa29.27■■■□□ 2.28
ACAP3-210ENST00000478065 GTF3C3Q9Y5Q9 886 aa29.23■■■□□ 2.27
ACAP3-210ENST00000478065 APLP2Q06481 763 aa29.18■■■□□ 2.26
ACAP3-210ENST00000478065 TOP2BQ02880 1626 aa29.17■■■□□ 2.26
ACAP3-210ENST00000478065 RANGAP1P46060 587 aaPredicted RBP29.08■■■□□ 2.25
ACAP3-210ENST00000478065 BIVM-ERCC5R4GMW8 1640 aa29.06■■■□□ 2.24
ACAP3-210ENST00000478065 NCAPD3P42695 1498 aa29.01■■■□□ 2.23
ACAP3-210ENST00000478065 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
ACAP3-210ENST00000478065 HMGXB3Q12766 1538 aa28.97■■■□□ 2.23
ACAP3-210ENST00000478065 PRXQ9BXM0 1461 aa28.97■■■□□ 2.23
ACAP3-210ENST00000478065 MIER1Q8N108 512 aa28.96■■■□□ 2.23
ACAP3-210ENST00000478065 CC2D2AQ9P2K1 1620 aa28.92■■■□□ 2.22
ACAP3-210ENST00000478065 YTHDC1Q96MU7 727 aaKnown RBP28.91■■■□□ 2.22
ACAP3-210ENST00000478065 ARAP1Q96P48 1450 aa28.89■■■□□ 2.21
ACAP3-210ENST00000478065 CUX1P39880 1505 aa28.82■■■□□ 2.2
ACAP3-210ENST00000478065 CLSPNQ9HAW4 1339 aa28.82■■■□□ 2.2
ACAP3-210ENST00000478065 KANK4Q5T7N3 995 aaPredicted RBP28.79■■■□□ 2.2
ACAP3-210ENST00000478065 DHX57Q6P158 1386 aaKnown RBP28.77■■■□□ 2.2
ACAP3-210ENST00000478065 KIF27Q86VH2 1401 aa28.76■■■□□ 2.19
ACAP3-210ENST00000478065 RRBP1Q9P2E9 1410 aaKnown RBP28.68■■■□□ 2.18
ACAP3-210ENST00000478065 CFTRP13569 1480 aa28.67■■■□□ 2.18
ACAP3-210ENST00000478065 ARHGAP35Q9NRY4 1499 aa28.6■■■□□ 2.17
ACAP3-210ENST00000478065 CUX2O14529 1486 aa28.56■■■□□ 2.16
ACAP3-210ENST00000478065 CCNB3Q8WWL7 1395 aa28.53■■■□□ 2.16
ACAP3-210ENST00000478065 PRDM2Q13029 1718 aa28.48■■■□□ 2.15
ACAP3-210ENST00000478065 IGF1RP08069 1367 aa28.43■■■□□ 2.14
ACAP3-210ENST00000478065 ITGAEP38570 1179 aa28.38■■■□□ 2.13
ACAP3-210ENST00000478065 CADPSQ9ULU8 1353 aa28.35■■■□□ 2.13
ACAP3-210ENST00000478065 MAP3K1Q13233 1512 aa28.35■■■□□ 2.13
ACAP3-210ENST00000478065 TIAM1Q13009 1591 aa28.34■■■□□ 2.13
ACAP3-210ENST00000478065 CARMIL1Q5VZK9 1371 aa28.31■■■□□ 2.12
ACAP3-210ENST00000478065 RAB3GAP2Q9H2M9 1393 aa28.31■■■□□ 2.12
ACAP3-210ENST00000478065 DNAJC5BQ9UF47 199 aa28.31■■■□□ 2.12
ACAP3-210ENST00000478065 FGD5Q6ZNL6 1462 aa28.27■■■□□ 2.12
ACAP3-210ENST00000478065 MAPKBP1O60336 1514 aa28.25■■■□□ 2.11
ACAP3-210ENST00000478065 LRRC9Q6ZRR7 1453 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms