RNA–Protein interactions for RNA: ENST00000477100.1

TRBVB-201, Transcript of T cell receptor beta variable B (pseudogene), humanhuman

BASIC

Gene TRBVB, Length 408 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVB-201ENST00000477100 AEBP2Q6ZN18 517 aaPredicted RBP18.21■□□□□ 0.51
TRBVB-201ENST00000477100 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
TRBVB-201ENST00000477100 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
TRBVB-201ENST00000477100 PHF23Q9BUL5 403 aaPredicted RBP15.32■□□□□ 0.04
TRBVB-201ENST00000477100 FOXD1Q16676 465 aa14.5□□□□□ -0.09
TRBVB-201ENST00000477100 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
TRBVB-201ENST00000477100 MSH5O43196 834 aa13.61□□□□□ -0.23
TRBVB-201ENST00000477100 PIAS4Q8N2W9 510 aaPredicted RBP13.51□□□□□ -0.25
TRBVB-201ENST00000477100 PPP6R1Q9UPN7 881 aa13.48□□□□□ -0.25
TRBVB-201ENST00000477100 POTEDQ86YR6 584 aa13.45□□□□□ -0.26
TRBVB-201ENST00000477100 ADRA2BP18089 450 aa13.42□□□□□ -0.26
TRBVB-201ENST00000477100 MAPK8IP2Q13387 824 aaPredicted RBP12.35□□□□□ -0.43
TRBVB-201ENST00000477100 DMRT2Q9Y5R5 561 aa12.32□□□□□ -0.44
TRBVB-201ENST00000477100 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
TRBVB-201ENST00000477100 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
TRBVB-201ENST00000477100 HOXD11P31277 338 aaPredicted RBP11.84□□□□□ -0.51
TRBVB-201ENST00000477100 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
TRBVB-201ENST00000477100 DCAF8L1A6NGE4 600 aa11.77□□□□□ -0.53
TRBVB-201ENST00000477100 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
TRBVB-201ENST00000477100 RNF216Q9NWF9 866 aaPredicted RBP11.71□□□□□ -0.53
TRBVB-201ENST00000477100 RNF39Q9H2S5 420 aa11.61□□□□□ -0.55
TRBVB-201ENST00000477100 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
TRBVB-201ENST00000477100 DNAJC5BQ9UF47 199 aa11.47□□□□□ -0.57
TRBVB-201ENST00000477100 C1QBPQ07021 282 aaKnown RBP11.43□□□□□ -0.58
TRBVB-201ENST00000477100 NPM3O75607 178 aaKnown RBP11.34□□□□□ -0.59
TRBVB-201ENST00000477100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRBVB-201ENST00000477100 KCNA4P22459 653 aa11.03□□□□□ -0.64
TRBVB-201ENST00000477100 U3KPZ7 1027 aaPredicted RBP11.02□□□□□ -0.65
TRBVB-201ENST00000477100 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
TRBVB-201ENST00000477100 SLC4A2P04920 1241 aa10.86□□□□□ -0.67
TRBVB-201ENST00000477100 CAPN15O75808 1086 aa10.85□□□□□ -0.67
TRBVB-201ENST00000477100 DSG3P32926 999 aa10.84□□□□□ -0.67
TRBVB-201ENST00000477100 APLP2Q06481 763 aa10.69□□□□□ -0.7
TRBVB-201ENST00000477100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.66□□□□□ -0.7
TRBVB-201ENST00000477100 HNRNPUL2Q1KMD3 747 aaKnown RBP10.66□□□□□ -0.7
TRBVB-201ENST00000477100 ZNF219Q9P2Y4 722 aaPredicted RBP10.65□□□□□ -0.7
TRBVB-201ENST00000477100 TRHP20396 242 aaPredicted RBP10.64□□□□□ -0.71
TRBVB-201ENST00000477100 SAMD1Q6SPF0 538 aaPredicted RBP10.6□□□□□ -0.71
TRBVB-201ENST00000477100 ABCB7O75027 752 aa10.59□□□□□ -0.71
TRBVB-201ENST00000477100 POTEHQ6S545 545 aa10.51□□□□□ -0.73
TRBVB-201ENST00000477100 MYCNP04198 464 aaPredicted RBP10.49□□□□□ -0.73
TRBVB-201ENST00000477100 SLC4A1APQ9BWU0 796 aaKnown RBP10.38□□□□□ -0.75
TRBVB-201ENST00000477100 POLA2Q14181 598 aa10.35□□□□□ -0.75
TRBVB-201ENST00000477100 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
TRBVB-201ENST00000477100 FOXD4L1Q9NU39 408 aa10.33□□□□□ -0.76
TRBVB-201ENST00000477100 ATF5Q9Y2D1 282 aaPredicted RBP10.25□□□□□ -0.77
TRBVB-201ENST00000477100 ZBTB22O15209 634 aa10.15□□□□□ -0.78
TRBVB-201ENST00000477100 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
TRBVB-201ENST00000477100 CHRDL2Q6WN34 429 aa10.14□□□□□ -0.79
TRBVB-201ENST00000477100 AKT1S1Q96B36 256 aa10.08□□□□□ -0.8
TRBVB-201ENST00000477100 ATXN8OSP0DMR3 200 aa10.03□□□□□ -0.8
TRBVB-201ENST00000477100 OSCARQ8IYS5 282 aa10.03□□□□□ -0.8
TRBVB-201ENST00000477100 REM2Q8IYK8 340 aaPredicted RBP9.98□□□□□ -0.81
TRBVB-201ENST00000477100 PIP4P2Q8N4L2 257 aa9.89□□□□□ -0.83
TRBVB-201ENST00000477100 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
TRBVB-201ENST00000477100 FBLN2P98095 1184 aa9.84□□□□□ -0.83
TRBVB-201ENST00000477100 SPDYE2BA6NHP3 402 aa9.83□□□□□ -0.84
TRBVB-201ENST00000477100 SPDYE6P0CI01 402 aa9.83□□□□□ -0.84
TRBVB-201ENST00000477100 SPDYE2Q495Y8 402 aa9.83□□□□□ -0.84
TRBVB-201ENST00000477100 FXR2P51116 673 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRBVB-201ENST00000477100 SP7Q8TDD2 431 aaPredicted RBP9.81□□□□□ -0.84
TRBVB-201ENST00000477100 MKRN4PQ13434 485 aaPredicted RBP9.78□□□□□ -0.84
TRBVB-201ENST00000477100 HAX1O00165 279 aa9.7□□□□□ -0.86
TRBVB-201ENST00000477100 SSUH2Q9Y2M2 353 aa9.7□□□□□ -0.86
TRBVB-201ENST00000477100 ZNF692Q9BU19 519 aaPredicted RBP9.68□□□□□ -0.86
TRBVB-201ENST00000477100 SPDYE1Q8NFV5 336 aaPredicted RBP9.67□□□□□ -0.86
TRBVB-201ENST00000477100 CLEC11AQ9Y240 323 aa9.64□□□□□ -0.87
TRBVB-201ENST00000477100 PRKAR2AP13861 404 aaKnown RBP9.61□□□□□ -0.87
TRBVB-201ENST00000477100 EVX2Q03828 476 aa9.6□□□□□ -0.87
TRBVB-201ENST00000477100 CSRNP3Q8WYN3 585 aa9.59□□□□□ -0.87
TRBVB-201ENST00000477100 PABPN1Q86U42 306 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRBVB-201ENST00000477100 C19orf67A6NJJ6 358 aa9.51□□□□□ -0.89
TRBVB-201ENST00000477100 CHADLQ6NUI6 762 aa9.48□□□□□ -0.89
TRBVB-201ENST00000477100 PRR29P0C7W0 189 aa9.47□□□□□ -0.89
TRBVB-201ENST00000477100 GABBR2O75899 941 aa9.38□□□□□ -0.91
TRBVB-201ENST00000477100 EHMT2Q96KQ7 1210 aa9.38□□□□□ -0.91
TRBVB-201ENST00000477100 FARP1Q9Y4F1 1045 aaPredicted RBP9.34□□□□□ -0.91
TRBVB-201ENST00000477100 CD44P16070 742 aaKnown RBP9.31□□□□□ -0.92
TRBVB-201ENST00000477100 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
TRBVB-201ENST00000477100 SPDYE4A6NLX3 237 aa9.25□□□□□ -0.93
TRBVB-201ENST00000477100 CREBZFQ9NS37 354 aa9.24□□□□□ -0.93
TRBVB-201ENST00000477100 CLCN6P51797 869 aa9.21□□□□□ -0.94
TRBVB-201ENST00000477100 POTEIP0CG38 1075 aa9.19□□□□□ -0.94
TRBVB-201ENST00000477100 LHX8Q68G74 356 aa9.19□□□□□ -0.94
TRBVB-201ENST00000477100 ZNF579Q8NAF0 562 aaKnown RBP9.18□□□□□ -0.94
TRBVB-201ENST00000477100 ZRANB1Q9UGI0 708 aa9.15□□□□□ -0.94
TRBVB-201ENST00000477100 DCBLD2Q96PD2 775 aa9.09□□□□□ -0.95
TRBVB-201ENST00000477100 MNX1P50219 401 aaPredicted RBP9.08□□□□□ -0.96
TRBVB-201ENST00000477100 PROM2Q8N271 834 aa9.06□□□□□ -0.96
TRBVB-201ENST00000477100 GALR2O43603 387 aaPredicted RBP9.05□□□□□ -0.96
TRBVB-201ENST00000477100 PAK3O75914 559 aaPredicted RBP9.05□□□□□ -0.96
TRBVB-201ENST00000477100 NPM1P06748 294 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRBVB-201ENST00000477100 PHF12Q96QT6 1004 aa9.02□□□□□ -0.97
TRBVB-201ENST00000477100 MS4A3Q96HJ5 214 aa8.9□□□□□ -0.98
TRBVB-201ENST00000477100 PELP1Q8IZL8 1130 aaKnown RBP8.89□□□□□ -0.99
TRBVB-201ENST00000477100 POTEB2H3BUK9 544 aa8.88□□□□□ -0.99
TRBVB-201ENST00000477100 ASTLQ6HA08 431 aaPredicted RBP8.87□□□□□ -0.99
TRBVB-201ENST00000477100 OTUD5Q96G74 571 aa8.87□□□□□ -0.99
TRBVB-201ENST00000477100 TSPYL2Q9H2G4 693 aaPredicted RBP8.87□□□□□ -0.99
TRBVB-201ENST00000477100 CCDC61Q9Y6R9 512 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms