RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
TTC3-215ENST00000476784 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
TTC3-215ENST00000476784 FAM9AQ8IZU1 332 aaPredicted RBP10.95□□□□□ -0.66
TTC3-215ENST00000476784 SUPT5HO00267 1087 aaKnown RBP10.75□□□□□ -0.69
TTC3-215ENST00000476784 APLP2Q06481 763 aa10.68□□□□□ -0.7
TTC3-215ENST00000476784 ATP1B4Q9UN42 357 aaPredicted RBP10.65□□□□□ -0.7
TTC3-215ENST00000476784 RANGAP1P46060 587 aaPredicted RBP10.62□□□□□ -0.71
TTC3-215ENST00000476784 MYT1LQ9UL68 1186 aa10.61□□□□□ -0.71
TTC3-215ENST00000476784 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.72
TTC3-215ENST00000476784 CHIC1Q5VXU3 224 aa10.53□□□□□ -0.72
TTC3-215ENST00000476784 PELP1Q8IZL8 1130 aaKnown RBP10.49□□□□□ -0.73
TTC3-215ENST00000476784 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
TTC3-215ENST00000476784 ERICH6Q7L0X2 663 aa10.28□□□□□ -0.76
TTC3-215ENST00000476784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.76
TTC3-215ENST00000476784 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.76
TTC3-215ENST00000476784 SLC4A1APQ9BWU0 796 aaKnown RBP10.24□□□□□ -0.77
TTC3-215ENST00000476784 POLR3GLQ9BT43 218 aa10.17□□□□□ -0.78
TTC3-215ENST00000476784 CNGB1Q14028 1251 aaPredicted RBP10.1□□□□□ -0.79
TTC3-215ENST00000476784 CCER1Q8TC90 406 aaPredicted RBP10.09□□□□□ -0.79
TTC3-215ENST00000476784 PCGF6Q9BYE7 350 aa10.06□□□□□ -0.8
TTC3-215ENST00000476784 PLPPR3Q6T4P5 718 aa10.05□□□□□ -0.8
TTC3-215ENST00000476784 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
TTC3-215ENST00000476784 UBTFP17480 764 aaKnown RBP10.04□□□□□ -0.8
TTC3-215ENST00000476784 BCANQ96GW7 911 aa10.01□□□□□ -0.81
TTC3-215ENST00000476784 MYT1Q01538 1121 aa9.93□□□□□ -0.82
TTC3-215ENST00000476784 DAXXQ9UER7 740 aaPredicted RBP9.93□□□□□ -0.82
TTC3-215ENST00000476784 ITGAEP38570 1179 aa9.92□□□□□ -0.82
TTC3-215ENST00000476784 NEFLP07196 543 aa9.9□□□□□ -0.82
TTC3-215ENST00000476784 BCL11AQ9H165 835 aa9.88□□□□□ -0.83
TTC3-215ENST00000476784 FBLN2P98095 1184 aa9.84□□□□□ -0.83
TTC3-215ENST00000476784 TRIM41Q8WV44 630 aa9.84□□□□□ -0.83
TTC3-215ENST00000476784 YTHDC1Q96MU7 727 aaKnown RBP9.81□□□□□ -0.84
TTC3-215ENST00000476784 A0A0G2JS52 829 aa9.81□□□□□ -0.84
TTC3-215ENST00000476784 NISCHQ9Y2I1 1504 aa9.79□□□□□ -0.84
TTC3-215ENST00000476784 PPARGC1BQ86YN6 1023 aaKnown RBP9.77□□□□□ -0.84
TTC3-215ENST00000476784 CLSPNQ9HAW4 1339 aa9.77□□□□□ -0.85
TTC3-215ENST00000476784 ESF1Q9H501 851 aaKnown RBP9.77□□□□□ -0.85
TTC3-215ENST00000476784 SCAF1Q9H7N4 1312 aaKnown RBP9.75□□□□□ -0.85
TTC3-215ENST00000476784 CENPBP07199 599 aaPredicted RBP9.7□□□□□ -0.86
TTC3-215ENST00000476784 ZBTB47Q9UFB7 747 aaPredicted RBP9.7□□□□□ -0.86
TTC3-215ENST00000476784 PLEKHG5O94827 1062 aa9.66□□□□□ -0.86
TTC3-215ENST00000476784 STAG3Q9UJ98 1225 aa9.63□□□□□ -0.87
TTC3-215ENST00000476784 ZNF316A6NFI3 1004 aaPredicted RBP9.62□□□□□ -0.87
TTC3-215ENST00000476784 TRIM52Q96A61 297 aa9.6□□□□□ -0.87
TTC3-215ENST00000476784 ZNF326Q5BKZ1 582 aaKnown RBP9.6□□□□□ -0.87
TTC3-215ENST00000476784 SENP3Q9H4L4 574 aaPredicted RBP9.59□□□□□ -0.87
TTC3-215ENST00000476784 NEFMP07197 916 aa9.58□□□□□ -0.88
TTC3-215ENST00000476784 ARID3CA6NKF2 412 aa9.55□□□□□ -0.88
TTC3-215ENST00000476784 ZBTB7CA1YPR0 619 aa9.53□□□□□ -0.88
TTC3-215ENST00000476784 FAM50AQ14320 339 aaKnown RBP9.53□□□□□ -0.88
TTC3-215ENST00000476784 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
TTC3-215ENST00000476784 NPM1P06748 294 aaKnown RBP eCLIP9.51□□□□□ -0.89
TTC3-215ENST00000476784 HAP1P54257 671 aaPredicted RBP9.49□□□□□ -0.89
TTC3-215ENST00000476784 CANXP27824 592 aaKnown RBP9.49□□□□□ -0.89
TTC3-215ENST00000476784 PABPN1Q86U42 306 aaKnown RBP eCLIP9.48□□□□□ -0.89
TTC3-215ENST00000476784 C14orf37Q86TY3 774 aa9.48□□□□□ -0.89
TTC3-215ENST00000476784 TULP1O00294 542 aaPredicted RBP9.47□□□□□ -0.89
TTC3-215ENST00000476784 NPM2Q86SE8 214 aaKnown RBP9.47□□□□□ -0.89
TTC3-215ENST00000476784 NCBP3Q53F19 620 aaKnown RBP9.44□□□□□ -0.9
TTC3-215ENST00000476784 ZNF777Q9ULD5 760 aaPredicted RBP9.42□□□□□ -0.9
TTC3-215ENST00000476784 ARXQ96QS3 562 aa9.42□□□□□ -0.9
TTC3-215ENST00000476784 ZEB1P37275 1124 aaPredicted RBP9.42□□□□□ -0.9
TTC3-215ENST00000476784 TRHP20396 242 aaPredicted RBP9.4□□□□□ -0.9
TTC3-215ENST00000476784 NEUROD1Q13562 356 aa9.4□□□□□ -0.9
TTC3-215ENST00000476784 NPHP1O15259 732 aa9.39□□□□□ -0.91
TTC3-215ENST00000476784 CDK11BP21127 795 aaKnown RBP9.38□□□□□ -0.91
TTC3-215ENST00000476784 CDK11AQ9UQ88 783 aaPredicted RBP9.38□□□□□ -0.91
TTC3-215ENST00000476784 ARID4BQ4LE39 1312 aaPredicted RBP9.37□□□□□ -0.91
TTC3-215ENST00000476784 RTL5Q5HYW3 569 aaPredicted RBP9.33□□□□□ -0.92
TTC3-215ENST00000476784 AEBP2Q6ZN18 517 aaPredicted RBP9.31□□□□□ -0.92
TTC3-215ENST00000476784 P3H3Q8IVL6 736 aa9.3□□□□□ -0.92
TTC3-215ENST00000476784 LMOD2Q6P5Q4 547 aa9.27□□□□□ -0.93
TTC3-215ENST00000476784 PPP1R15AO75807 674 aaPredicted RBP9.24□□□□□ -0.93
TTC3-215ENST00000476784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.24□□□□□ -0.936e-8■■□□□ 14.4
TTC3-215ENST00000476784 ABCC9O60706 1549 aa9.21□□□□□ -0.94
TTC3-215ENST00000476784 HSP90AA1P07900 732 aaKnown RBP9.2□□□□□ -0.94
TTC3-215ENST00000476784 TAOK2Q9UL54 1235 aa9.17□□□□□ -0.94
TTC3-215ENST00000476784 CLSTN1O94985 981 aa9.16□□□□□ -0.94
TTC3-215ENST00000476784 KRI1Q8N9T8 703 aaKnown RBP9.16□□□□□ -0.94
TTC3-215ENST00000476784 PHF23Q9BUL5 403 aaPredicted RBP9.14□□□□□ -0.95
TTC3-215ENST00000476784 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.13□□□□□ -0.95
TTC3-215ENST00000476784 ISY1Q9ULR0 285 aaKnown RBP9.11□□□□□ -0.95
TTC3-215ENST00000476784 CCDC9Q9Y3X0 531 aaKnown RBP9.11□□□□□ -0.95
TTC3-215ENST00000476784 KCNH8Q96L42 1107 aa9.1□□□□□ -0.95
TTC3-215ENST00000476784 SALL2Q9Y467 1007 aaPredicted RBP9.1□□□□□ -0.95
TTC3-215ENST00000476784 PRM3Q9NNZ6 103 aa9.1□□□□□ -0.95
TTC3-215ENST00000476784 ANP32CO43423 234 aa9.1□□□□□ -0.95
TTC3-215ENST00000476784 TRIM26Q12899 539 aaPredicted RBP9.08□□□□□ -0.96
TTC3-215ENST00000476784 DCAF8L1A6NGE4 600 aa9.08□□□□□ -0.96
TTC3-215ENST00000476784 ANP32BQ92688 251 aaKnown RBP9.07□□□□□ -0.96
TTC3-215ENST00000476784 GOLGA2Q08379 1002 aa9.06□□□□□ -0.96
TTC3-215ENST00000476784 DIEXFQ68CQ4 756 aaKnown RBP9.05□□□□□ -0.96
TTC3-215ENST00000476784 LOC105371045A0A1W2PR82 267 aa9.05□□□□□ -0.96
TTC3-215ENST00000476784 MLECQ14165 292 aa9.05□□□□□ -0.96
TTC3-215ENST00000476784 PPM1GO15355 546 aaPredicted RBP9.04□□□□□ -0.96
TTC3-215ENST00000476784 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
TTC3-215ENST00000476784 KDM2AQ9Y2K7 1162 aa9.02□□□□□ -0.97
TTC3-215ENST00000476784 TPRNQ4KMQ1 711 aa9.02□□□□□ -0.97
TTC3-215ENST00000476784 TMX4Q9H1E5 349 aaPredicted RBP9.01□□□□□ -0.97
TTC3-215ENST00000476784 KLHL34Q8N239 644 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms