RNA–Protein interactions for RNA: ENST00000476706.5

RBM17-210, Transcript of RNA binding motif protein 17, humanhuman

TSL 2

Gene RBM17, Length 927 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM17-210ENST00000476706 AEBP2Q6ZN18 517 aaPredicted RBP34.12■■■■□ 3.05
RBM17-210ENST00000476706 CHIC1Q5VXU3 224 aa32.44■■■□□ 2.78
RBM17-210ENST00000476706 SENP3Q9H4L4 574 aaPredicted RBP29.18■■■□□ 2.26
RBM17-210ENST00000476706 PHF23Q9BUL5 403 aaPredicted RBP28.74■■■□□ 2.19
RBM17-210ENST00000476706 FOXD1Q16676 465 aa27.13■■□□□ 1.93
RBM17-210ENST00000476706 PLPPR3Q6T4P5 718 aa25.93■■□□□ 1.74
RBM17-210ENST00000476706 MSH5O43196 834 aa25.46■■□□□ 1.67
RBM17-210ENST00000476706 PIAS4Q8N2W9 510 aaPredicted RBP25.35■■□□□ 1.65
RBM17-210ENST00000476706 PPP6R1Q9UPN7 881 aa25.34■■□□□ 1.65
RBM17-210ENST00000476706 ADRA2BP18089 450 aa25.24■■□□□ 1.63
RBM17-210ENST00000476706 POTEDQ86YR6 584 aa24.79■■□□□ 1.56
RBM17-210ENST00000476706 SCAF1Q9H7N4 1312 aaKnown RBP23.19■■□□□ 1.3
RBM17-210ENST00000476706 MAPK8IP2Q13387 824 aaPredicted RBP23.16■■□□□ 1.3
RBM17-210ENST00000476706 DMRT2Q9Y5R5 561 aa23.13■■□□□ 1.29
RBM17-210ENST00000476706 PPP4R3CPQ6ZMV5 832 aa22.69■■□□□ 1.22
RBM17-210ENST00000476706 CNKSR2Q8WXI2 1034 aa22.3■■□□□ 1.16
RBM17-210ENST00000476706 HOXD11P31277 338 aaPredicted RBP22.29■■□□□ 1.16
RBM17-210ENST00000476706 RNF216Q9NWF9 866 aaPredicted RBP22.12■■□□□ 1.13
RBM17-210ENST00000476706 DCAF8L1A6NGE4 600 aa22.06■■□□□ 1.12
RBM17-210ENST00000476706 NCBP3Q53F19 620 aaKnown RBP21.86■■□□□ 1.09
RBM17-210ENST00000476706 CACNB1Q02641 598 aaPredicted RBP21.78■■□□□ 1.08
RBM17-210ENST00000476706 RNF39Q9H2S5 420 aa21.71■■□□□ 1.07
RBM17-210ENST00000476706 DNAJC5BQ9UF47 199 aa21.62■■□□□ 1.05
RBM17-210ENST00000476706 NPM3O75607 178 aaKnown RBP21.51■■□□□ 1.03
RBM17-210ENST00000476706 C1QBPQ07021 282 aaKnown RBP21.42■■□□□ 1.02
RBM17-210ENST00000476706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.983e-8■■■□□ 15.7
RBM17-210ENST00000476706 KCNA4P22459 653 aa21.07■□□□□ 0.96
RBM17-210ENST00000476706 U3KPZ7 1027 aaPredicted RBP20.75■□□□□ 0.91
RBM17-210ENST00000476706 SLC4A2P04920 1241 aa20.54■□□□□ 0.88
RBM17-210ENST00000476706 SPINK5Q9NQ38 1064 aaPredicted RBP20.41■□□□□ 0.86
RBM17-210ENST00000476706 CAPN15O75808 1086 aa20.37■□□□□ 0.85
RBM17-210ENST00000476706 DSG3P32926 999 aa20.31■□□□□ 0.84
RBM17-210ENST00000476706 APLP2Q06481 763 aa20.25■□□□□ 0.83
RBM17-210ENST00000476706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.23■□□□□ 0.83
RBM17-210ENST00000476706 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
RBM17-210ENST00000476706 SAMD1Q6SPF0 538 aaPredicted RBP20.09■□□□□ 0.81
RBM17-210ENST00000476706 ZNF219Q9P2Y4 722 aaPredicted RBP20.09■□□□□ 0.81
RBM17-210ENST00000476706 TRHP20396 242 aaPredicted RBP20.04■□□□□ 0.8
RBM17-210ENST00000476706 MYCNP04198 464 aaPredicted RBP19.93■□□□□ 0.78
RBM17-210ENST00000476706 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
RBM17-210ENST00000476706 ABCB7O75027 752 aa19.88■□□□□ 0.77
RBM17-210ENST00000476706 FOXD4L1Q9NU39 408 aa19.71■□□□□ 0.75
RBM17-210ENST00000476706 POLA2Q14181 598 aa19.53■□□□□ 0.72
RBM17-210ENST00000476706 POTEHQ6S545 545 aa19.44■□□□□ 0.7
RBM17-210ENST00000476706 RBM42Q9BTD8 480 aaKnown RBP19.43■□□□□ 0.7
RBM17-210ENST00000476706 ATF5Q9Y2D1 282 aaPredicted RBP19.39■□□□□ 0.69
RBM17-210ENST00000476706 ZBTB22O15209 634 aa19.37■□□□□ 0.69
RBM17-210ENST00000476706 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
RBM17-210ENST00000476706 ATXN8OSP0DMR3 200 aa19.16■□□□□ 0.66
RBM17-210ENST00000476706 CHRDL2Q6WN34 429 aa18.96■□□□□ 0.63
RBM17-210ENST00000476706 AKT1S1Q96B36 256 aa18.96■□□□□ 0.63
RBM17-210ENST00000476706 OSCARQ8IYS5 282 aa18.9■□□□□ 0.62
RBM17-210ENST00000476706 REM2Q8IYK8 340 aaPredicted RBP18.75■□□□□ 0.59
RBM17-210ENST00000476706 FBLN2P98095 1184 aa18.7■□□□□ 0.58
RBM17-210ENST00000476706 SPDYE2BA6NHP3 402 aa18.61■□□□□ 0.57
RBM17-210ENST00000476706 SPDYE6P0CI01 402 aa18.61■□□□□ 0.57
RBM17-210ENST00000476706 SPDYE2Q495Y8 402 aa18.61■□□□□ 0.57
RBM17-210ENST00000476706 PITPNM1O00562 1244 aa18.54■□□□□ 0.56
RBM17-210ENST00000476706 MKRN4PQ13434 485 aaPredicted RBP18.53■□□□□ 0.56
RBM17-210ENST00000476706 PIP4P2Q8N4L2 257 aa18.49■□□□□ 0.55
RBM17-210ENST00000476706 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
RBM17-210ENST00000476706 FXR2P51116 673 aaKnown RBP eCLIP18.41■□□□□ 0.54
RBM17-210ENST00000476706 SSUH2Q9Y2M2 353 aa18.36■□□□□ 0.53
RBM17-210ENST00000476706 ZNF692Q9BU19 519 aaPredicted RBP18.32■□□□□ 0.52
RBM17-210ENST00000476706 SPDYE1Q8NFV5 336 aaPredicted RBP18.27■□□□□ 0.52
RBM17-210ENST00000476706 SP7Q8TDD2 431 aaPredicted RBP18.24■□□□□ 0.51
RBM17-210ENST00000476706 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
RBM17-210ENST00000476706 CLEC11AQ9Y240 323 aa18.15■□□□□ 0.5
RBM17-210ENST00000476706 HAX1O00165 279 aa18.13■□□□□ 0.49
RBM17-210ENST00000476706 PRKAR2AP13861 404 aaKnown RBP18.05■□□□□ 0.48
RBM17-210ENST00000476706 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
RBM17-210ENST00000476706 PRR29P0C7W0 189 aa17.89■□□□□ 0.45
RBM17-210ENST00000476706 EVX2Q03828 476 aa17.88■□□□□ 0.45
RBM17-210ENST00000476706 C19orf67A6NJJ6 358 aa17.82■□□□□ 0.44
RBM17-210ENST00000476706 CHADLQ6NUI6 762 aa17.79■□□□□ 0.44
RBM17-210ENST00000476706 SPDYE4A6NLX3 237 aa17.66■□□□□ 0.42
RBM17-210ENST00000476706 STAG3Q9UJ98 1225 aa17.62■□□□□ 0.41
RBM17-210ENST00000476706 FARP1Q9Y4F1 1045 aaPredicted RBP17.6■□□□□ 0.41
RBM17-210ENST00000476706 GABBR2O75899 941 aa17.52■□□□□ 0.4
RBM17-210ENST00000476706 CD44P16070 742 aaKnown RBP17.48■□□□□ 0.39
RBM17-210ENST00000476706 CREBZFQ9NS37 354 aa17.46■□□□□ 0.39
RBM17-210ENST00000476706 CLCN6P51797 869 aa17.37■□□□□ 0.37
RBM17-210ENST00000476706 PROM2Q8N271 834 aa17.31■□□□□ 0.36
RBM17-210ENST00000476706 ZNF579Q8NAF0 562 aaKnown RBP17.27■□□□□ 0.36
RBM17-210ENST00000476706 ZRANB1Q9UGI0 708 aa17.21■□□□□ 0.35
RBM17-210ENST00000476706 MNX1P50219 401 aaPredicted RBP17.18■□□□□ 0.34
RBM17-210ENST00000476706 NPM1P06748 294 aaKnown RBP eCLIP17.16■□□□□ 0.34
RBM17-210ENST00000476706 POTEIP0CG38 1075 aa17.14■□□□□ 0.33
RBM17-210ENST00000476706 PAK3O75914 559 aaPredicted RBP17.12■□□□□ 0.33
RBM17-210ENST00000476706 LHX8Q68G74 356 aa17.08■□□□□ 0.32
RBM17-210ENST00000476706 DCBLD2Q96PD2 775 aa17.05■□□□□ 0.32
RBM17-210ENST00000476706 GALR2O43603 387 aaPredicted RBP16.99■□□□□ 0.31
RBM17-210ENST00000476706 PHF12Q96QT6 1004 aa16.96■□□□□ 0.31
RBM17-210ENST00000476706 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
RBM17-210ENST00000476706 MIER1Q8N108 512 aa16.82■□□□□ 0.28
RBM17-210ENST00000476706 TSPYL2Q9H2G4 693 aaPredicted RBP16.77■□□□□ 0.28
RBM17-210ENST00000476706 CCDC61Q9Y6R9 512 aa16.77■□□□□ 0.28
RBM17-210ENST00000476706 MS4A3Q96HJ5 214 aa16.76■□□□□ 0.27
RBM17-210ENST00000476706 FKBP8Q14318 412 aa16.73■□□□□ 0.27
RBM17-210ENST00000476706 ASTLQ6HA08 431 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms