RNA–Protein interactions for RNA: ENST00000475694.1

PSME4-205, Transcript of proteasome activator subunit 4, humanhuman

TSL 3

Gene PSME4, Length 547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-205ENST00000475694 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
PSME4-205ENST00000475694 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
PSME4-205ENST00000475694 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
PSME4-205ENST00000475694 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
PSME4-205ENST00000475694 FOXD1Q16676 465 aa16.93■□□□□ 0.3
PSME4-205ENST00000475694 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
PSME4-205ENST00000475694 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
PSME4-205ENST00000475694 MSH5O43196 834 aa15.81■□□□□ 0.12
PSME4-205ENST00000475694 ADRA2BP18089 450 aa15.76■□□□□ 0.11
PSME4-205ENST00000475694 PIAS4Q8N2W9 510 aaPredicted RBP15.76■□□□□ 0.11
PSME4-205ENST00000475694 POTEDQ86YR6 584 aa15.44■□□□□ 0.06
PSME4-205ENST00000475694 MAPK8IP2Q13387 824 aaPredicted RBP14.49□□□□□ -0.09
PSME4-205ENST00000475694 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
PSME4-205ENST00000475694 DMRT2Q9Y5R5 561 aa14.41□□□□□ -0.1
PSME4-205ENST00000475694 PPP4R3CPQ6ZMV5 832 aa14.15□□□□□ -0.14
PSME4-205ENST00000475694 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
PSME4-205ENST00000475694 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
PSME4-205ENST00000475694 RNF216Q9NWF9 866 aaPredicted RBP13.78□□□□□ -0.2
PSME4-205ENST00000475694 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
PSME4-205ENST00000475694 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
PSME4-205ENST00000475694 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
PSME4-205ENST00000475694 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
PSME4-205ENST00000475694 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
PSME4-205ENST00000475694 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
PSME4-205ENST00000475694 C1QBPQ07021 282 aaKnown RBP13.32□□□□□ -0.28
PSME4-205ENST00000475694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.3
PSME4-205ENST00000475694 KCNA4P22459 653 aa13.15□□□□□ -0.3
PSME4-205ENST00000475694 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
PSME4-205ENST00000475694 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
PSME4-205ENST00000475694 SPINK5Q9NQ38 1064 aaPredicted RBP12.73□□□□□ -0.37
PSME4-205ENST00000475694 CAPN15O75808 1086 aa12.66□□□□□ -0.38
PSME4-205ENST00000475694 DSG3P32926 999 aa12.66□□□□□ -0.38
PSME4-205ENST00000475694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
PSME4-205ENST00000475694 APLP2Q06481 763 aa12.54□□□□□ -0.4
PSME4-205ENST00000475694 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
PSME4-205ENST00000475694 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
PSME4-205ENST00000475694 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
PSME4-205ENST00000475694 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
PSME4-205ENST00000475694 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.42
PSME4-205ENST00000475694 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
PSME4-205ENST00000475694 ABCB7O75027 752 aa12.37□□□□□ -0.43
PSME4-205ENST00000475694 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
PSME4-205ENST00000475694 POLA2Q14181 598 aa12.16□□□□□ -0.46
PSME4-205ENST00000475694 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
PSME4-205ENST00000475694 ZBTB22O15209 634 aa12.12□□□□□ -0.47
PSME4-205ENST00000475694 POTEHQ6S545 545 aa12.08□□□□□ -0.48
PSME4-205ENST00000475694 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
PSME4-205ENST00000475694 ATXN8OSP0DMR3 200 aa11.94□□□□□ -0.5
PSME4-205ENST00000475694 ZBTB12Q9Y330 459 aaPredicted RBP11.91□□□□□ -0.5
PSME4-205ENST00000475694 AKT1S1Q96B36 256 aa11.8□□□□□ -0.52
PSME4-205ENST00000475694 CHRDL2Q6WN34 429 aa11.78□□□□□ -0.52
PSME4-205ENST00000475694 OSCARQ8IYS5 282 aa11.75□□□□□ -0.53
PSME4-205ENST00000475694 REM2Q8IYK8 340 aaPredicted RBP11.68□□□□□ -0.54
PSME4-205ENST00000475694 FBLN2P98095 1184 aa11.6□□□□□ -0.55
PSME4-205ENST00000475694 MKRN4PQ13434 485 aaPredicted RBP11.59□□□□□ -0.55
PSME4-205ENST00000475694 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
PSME4-205ENST00000475694 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
PSME4-205ENST00000475694 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
PSME4-205ENST00000475694 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
PSME4-205ENST00000475694 PITPNM1O00562 1244 aa11.54□□□□□ -0.56
PSME4-205ENST00000475694 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
PSME4-205ENST00000475694 FXR2P51116 673 aaKnown RBP eCLIP11.48□□□□□ -0.57
PSME4-205ENST00000475694 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
PSME4-205ENST00000475694 ZNF692Q9BU19 519 aaPredicted RBP11.4□□□□□ -0.58
PSME4-205ENST00000475694 SPDYE1Q8NFV5 336 aaPredicted RBP11.34□□□□□ -0.59
PSME4-205ENST00000475694 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
PSME4-205ENST00000475694 EHMT2Q96KQ7 1210 aa11.31□□□□□ -0.6
PSME4-205ENST00000475694 CLEC11AQ9Y240 323 aa11.27□□□□□ -0.61
PSME4-205ENST00000475694 HAX1O00165 279 aa11.26□□□□□ -0.61
PSME4-205ENST00000475694 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
PSME4-205ENST00000475694 PRKAR2AP13861 404 aaKnown RBP11.22□□□□□ -0.61
PSME4-205ENST00000475694 EVX2Q03828 476 aa11.19□□□□□ -0.62
PSME4-205ENST00000475694 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
PSME4-205ENST00000475694 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
PSME4-205ENST00000475694 CHADLQ6NUI6 762 aa11.09□□□□□ -0.63
PSME4-205ENST00000475694 SPDYE4A6NLX3 237 aa10.99□□□□□ -0.65
PSME4-205ENST00000475694 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
PSME4-205ENST00000475694 STAG3Q9UJ98 1225 aa10.95□□□□□ -0.66
PSME4-205ENST00000475694 GABBR2O75899 941 aa10.92□□□□□ -0.66
PSME4-205ENST00000475694 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
PSME4-205ENST00000475694 CD44P16070 742 aaKnown RBP10.86□□□□□ -0.67
PSME4-205ENST00000475694 PROM2Q8N271 834 aa10.82□□□□□ -0.68
PSME4-205ENST00000475694 CLCN6P51797 869 aa10.78□□□□□ -0.68
PSME4-205ENST00000475694 MNX1P50219 401 aaPredicted RBP10.74□□□□□ -0.69
PSME4-205ENST00000475694 ZNF579Q8NAF0 562 aaKnown RBP10.74□□□□□ -0.69
PSME4-205ENST00000475694 POTEIP0CG38 1075 aa10.72□□□□□ -0.69
PSME4-205ENST00000475694 ZRANB1Q9UGI0 708 aa10.7□□□□□ -0.7
PSME4-205ENST00000475694 NPM1P06748 294 aaKnown RBP eCLIP10.66□□□□□ -0.7
PSME4-205ENST00000475694 LHX8Q68G74 356 aa10.62□□□□□ -0.71
PSME4-205ENST00000475694 PAK3O75914 559 aaPredicted RBP10.58□□□□□ -0.72
PSME4-205ENST00000475694 DCBLD2Q96PD2 775 aa10.58□□□□□ -0.72
PSME4-205ENST00000475694 GALR2O43603 387 aaPredicted RBP10.57□□□□□ -0.72
PSME4-205ENST00000475694 PHF12Q96QT6 1004 aa10.57□□□□□ -0.72
PSME4-205ENST00000475694 MIER1Q8N108 512 aa10.47□□□□□ -0.73
PSME4-205ENST00000475694 CCDC61Q9Y6R9 512 aa10.46□□□□□ -0.73
PSME4-205ENST00000475694 MS4A3Q96HJ5 214 aa10.43□□□□□ -0.74
PSME4-205ENST00000475694 TSPYL2Q9H2G4 693 aaPredicted RBP10.43□□□□□ -0.74
PSME4-205ENST00000475694 PLEKHG5O94827 1062 aa10.42□□□□□ -0.74
PSME4-205ENST00000475694 FKBP8Q14318 412 aa10.42□□□□□ -0.74
PSME4-205ENST00000475694 PELP1Q8IZL8 1130 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms