RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 AEBP2Q6ZN18 517 aaPredicted RBP21.1■□□□□ 0.97
RPSA-205ENST00000475346 CHIC1Q5VXU3 224 aa20.37■□□□□ 0.85
RPSA-205ENST00000475346 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
RPSA-205ENST00000475346 SENP3Q9H4L4 574 aaPredicted RBP17.91■□□□□ 0.46
RPSA-205ENST00000475346 FOXD1Q16676 465 aa16.69■□□□□ 0.26
RPSA-205ENST00000475346 PLPPR3Q6T4P5 718 aa16.46■□□□□ 0.23
RPSA-205ENST00000475346 ADRA2BP18089 450 aa15.94■□□□□ 0.14
RPSA-205ENST00000475346 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
RPSA-205ENST00000475346 PIAS4Q8N2W9 510 aaPredicted RBP15.74■□□□□ 0.11
RPSA-205ENST00000475346 MSH5O43196 834 aa15.43■□□□□ 0.06
RPSA-205ENST00000475346 MAPK8IP2Q13387 824 aaPredicted RBP14.53□□□□□ -0.08
RPSA-205ENST00000475346 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
RPSA-205ENST00000475346 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
RPSA-205ENST00000475346 POTEDQ86YR6 584 aa14.46□□□□□ -0.09
RPSA-205ENST00000475346 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
RPSA-205ENST00000475346 CNKSR2Q8WXI2 1034 aa14.12□□□□□ -0.15
RPSA-205ENST00000475346 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
RPSA-205ENST00000475346 KCNA4P22459 653 aa13.98□□□□□ -0.17
RPSA-205ENST00000475346 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
RPSA-205ENST00000475346 DCAF8L1A6NGE4 600 aa13.87□□□□□ -0.19
RPSA-205ENST00000475346 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
RPSA-205ENST00000475346 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
RPSA-205ENST00000475346 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
RPSA-205ENST00000475346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.27
RPSA-205ENST00000475346 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
RPSA-205ENST00000475346 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
RPSA-205ENST00000475346 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
RPSA-205ENST00000475346 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
RPSA-205ENST00000475346 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
RPSA-205ENST00000475346 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
RPSA-205ENST00000475346 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
RPSA-205ENST00000475346 C1QBPQ07021 282 aaKnown RBP13.01□□□□□ -0.33
RPSA-205ENST00000475346 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
RPSA-205ENST00000475346 ZBTB22O15209 634 aa12.83□□□□□ -0.36
RPSA-205ENST00000475346 CAPN15O75808 1086 aa12.8□□□□□ -0.36
RPSA-205ENST00000475346 MYCNP04198 464 aaPredicted RBP12.8□□□□□ -0.36
RPSA-205ENST00000475346 SPINK5Q9NQ38 1064 aaPredicted RBP12.78□□□□□ -0.36
RPSA-205ENST00000475346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
RPSA-205ENST00000475346 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
RPSA-205ENST00000475346 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
RPSA-205ENST00000475346 TRHP20396 242 aaPredicted RBP12.7□□□□□ -0.38
RPSA-205ENST00000475346 APLP2Q06481 763 aa12.69□□□□□ -0.38
RPSA-205ENST00000475346 ABCB7O75027 752 aa12.56□□□□□ -0.4
RPSA-205ENST00000475346 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
RPSA-205ENST00000475346 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
RPSA-205ENST00000475346 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
RPSA-205ENST00000475346 DSG3P32926 999 aa12.5□□□□□ -0.41
RPSA-205ENST00000475346 POLA2Q14181 598 aa12.38□□□□□ -0.43
RPSA-205ENST00000475346 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
RPSA-205ENST00000475346 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
RPSA-205ENST00000475346 AMER1Q5JTC6 1135 aaPredicted RBP12.31□□□□□ -0.44
RPSA-205ENST00000475346 ZBTB12Q9Y330 459 aaPredicted RBP12.07□□□□□ -0.48
RPSA-205ENST00000475346 FBLN2P98095 1184 aa12.02□□□□□ -0.49
RPSA-205ENST00000475346 FKBP8Q14318 412 aa11.98□□□□□ -0.49
RPSA-205ENST00000475346 OSCARQ8IYS5 282 aa11.97□□□□□ -0.49
RPSA-205ENST00000475346 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
RPSA-205ENST00000475346 RBM42Q9BTD8 480 aaKnown RBP11.92□□□□□ -0.5
RPSA-205ENST00000475346 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
RPSA-205ENST00000475346 SPDYE2BA6NHP3 402 aa11.73□□□□□ -0.53
RPSA-205ENST00000475346 SPDYE6P0CI01 402 aa11.73□□□□□ -0.53
RPSA-205ENST00000475346 SPDYE2Q495Y8 402 aa11.73□□□□□ -0.53
RPSA-205ENST00000475346 AKT1S1Q96B36 256 aa11.72□□□□□ -0.53
RPSA-205ENST00000475346 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
RPSA-205ENST00000475346 SPDYE4A6NLX3 237 aa11.61□□□□□ -0.55
RPSA-205ENST00000475346 SSUH2Q9Y2M2 353 aa11.59□□□□□ -0.55
RPSA-205ENST00000475346 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
RPSA-205ENST00000475346 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
RPSA-205ENST00000475346 PITPNM1O00562 1244 aa11.54□□□□□ -0.56
RPSA-205ENST00000475346 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
RPSA-205ENST00000475346 SPDYE1Q8NFV5 336 aaPredicted RBP11.48□□□□□ -0.57
RPSA-205ENST00000475346 POTEHQ6S545 545 aa11.42□□□□□ -0.58
RPSA-205ENST00000475346 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
RPSA-205ENST00000475346 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
RPSA-205ENST00000475346 PLCB2Q00722 1185 aa11.33□□□□□ -0.6
RPSA-205ENST00000475346 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.6
RPSA-205ENST00000475346 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
RPSA-205ENST00000475346 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
RPSA-205ENST00000475346 PRKAR2AP13861 404 aaKnown RBP11.27□□□□□ -0.61
RPSA-205ENST00000475346 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
RPSA-205ENST00000475346 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
RPSA-205ENST00000475346 PROM2Q8N271 834 aa11.22□□□□□ -0.61
RPSA-205ENST00000475346 DCAF8L2P0C7V8 631 aa11.21□□□□□ -0.61
RPSA-205ENST00000475346 HAX1O00165 279 aa11.13□□□□□ -0.63
RPSA-205ENST00000475346 PRKCSHP14314 528 aaPredicted RBP11.12□□□□□ -0.63
RPSA-205ENST00000475346 BCANQ96GW7 911 aa11.12□□□□□ -0.63
RPSA-205ENST00000475346 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
RPSA-205ENST00000475346 CREBZFQ9NS37 354 aa11.11□□□□□ -0.63
RPSA-205ENST00000475346 MIER1Q8N108 512 aa11.09□□□□□ -0.63
RPSA-205ENST00000475346 PLCD3Q8N3E9 789 aa11.06□□□□□ -0.64
RPSA-205ENST00000475346 FARP1Q9Y4F1 1045 aaPredicted RBP11.06□□□□□ -0.64
RPSA-205ENST00000475346 IFNLR1Q8IU57 520 aaPredicted RBP11.03□□□□□ -0.64
RPSA-205ENST00000475346 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
RPSA-205ENST00000475346 PLEKHG5O94827 1062 aa11.01□□□□□ -0.65
RPSA-205ENST00000475346 VSIG10Q8N0Z9 540 aa11□□□□□ -0.65
RPSA-205ENST00000475346 PKD2Q13563 968 aa10.97□□□□□ -0.65
RPSA-205ENST00000475346 EVX2Q03828 476 aa10.96□□□□□ -0.65
RPSA-205ENST00000475346 NPM1P06748 294 aaKnown RBP eCLIP10.94□□□□□ -0.66
RPSA-205ENST00000475346 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
RPSA-205ENST00000475346 C19orf67A6NJJ6 358 aa10.92□□□□□ -0.66
RPSA-205ENST00000475346 MNX1P50219 401 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms