RNA–Protein interactions for RNA: ENST00000475321.5

RBBP4-210, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-210ENST00000475321 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
RBBP4-210ENST00000475321 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
RBBP4-210ENST00000475321 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
RBBP4-210ENST00000475321 PHF23Q9BUL5 403 aaPredicted RBP16.35■□□□□ 0.21
RBBP4-210ENST00000475321 FOXD1Q16676 465 aa15.47■□□□□ 0.07
RBBP4-210ENST00000475321 PLPPR3Q6T4P5 718 aa14.63□□□□□ -0.07
RBBP4-210ENST00000475321 MSH5O43196 834 aa14.53□□□□□ -0.08
RBBP4-210ENST00000475321 PIAS4Q8N2W9 510 aaPredicted RBP14.41□□□□□ -0.1
RBBP4-210ENST00000475321 PPP6R1Q9UPN7 881 aa14.39□□□□□ -0.11
RBBP4-210ENST00000475321 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
RBBP4-210ENST00000475321 ADRA2BP18089 450 aa14.31□□□□□ -0.12
RBBP4-210ENST00000475321 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
RBBP4-210ENST00000475321 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
RBBP4-210ENST00000475321 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
RBBP4-210ENST00000475321 PPP4R3CPQ6ZMV5 832 aa12.8□□□□□ -0.36
RBBP4-210ENST00000475321 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
RBBP4-210ENST00000475321 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
RBBP4-210ENST00000475321 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
RBBP4-210ENST00000475321 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
RBBP4-210ENST00000475321 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
RBBP4-210ENST00000475321 RNF39Q9H2S5 420 aa12.4□□□□□ -0.42
RBBP4-210ENST00000475321 DNAJC5BQ9UF47 199 aa12.29□□□□□ -0.44
RBBP4-210ENST00000475321 NCBP3Q53F19 620 aaKnown RBP12.28□□□□□ -0.44
RBBP4-210ENST00000475321 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
RBBP4-210ENST00000475321 NPM3O75607 178 aaKnown RBP12.11□□□□□ -0.47
RBBP4-210ENST00000475321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.495e-7■□□□□ 10.1
RBBP4-210ENST00000475321 KCNA4P22459 653 aa11.77□□□□□ -0.53
RBBP4-210ENST00000475321 U3KPZ7 1027 aaPredicted RBP11.77□□□□□ -0.53
RBBP4-210ENST00000475321 SLC4A2P04920 1241 aa11.6□□□□□ -0.55
RBBP4-210ENST00000475321 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
RBBP4-210ENST00000475321 DSG3P32926 999 aa11.57□□□□□ -0.56
RBBP4-210ENST00000475321 CAPN15O75808 1086 aa11.55□□□□□ -0.56
RBBP4-210ENST00000475321 APLP2Q06481 763 aa11.42□□□□□ -0.58
RBBP4-210ENST00000475321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
RBBP4-210ENST00000475321 HNRNPUL2Q1KMD3 747 aaKnown RBP11.4□□□□□ -0.58
RBBP4-210ENST00000475321 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
RBBP4-210ENST00000475321 TRHP20396 242 aaPredicted RBP11.33□□□□□ -0.6
RBBP4-210ENST00000475321 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
RBBP4-210ENST00000475321 ABCB7O75027 752 aa11.27□□□□□ -0.61
RBBP4-210ENST00000475321 MYCNP04198 464 aaPredicted RBP11.21□□□□□ -0.61
RBBP4-210ENST00000475321 POTEHQ6S545 545 aa11.21□□□□□ -0.61
RBBP4-210ENST00000475321 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
RBBP4-210ENST00000475321 RBM42Q9BTD8 480 aaKnown RBP11.04□□□□□ -0.64
RBBP4-210ENST00000475321 FOXD4L1Q9NU39 408 aa11.04□□□□□ -0.64
RBBP4-210ENST00000475321 POLA2Q14181 598 aa11.03□□□□□ -0.64
RBBP4-210ENST00000475321 ATF5Q9Y2D1 282 aaPredicted RBP10.94□□□□□ -0.66
RBBP4-210ENST00000475321 ZBTB12Q9Y330 459 aaPredicted RBP10.85□□□□□ -0.67
RBBP4-210ENST00000475321 ZBTB22O15209 634 aa10.84□□□□□ -0.67
RBBP4-210ENST00000475321 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
RBBP4-210ENST00000475321 AKT1S1Q96B36 256 aa10.77□□□□□ -0.69
RBBP4-210ENST00000475321 ATXN8OSP0DMR3 200 aa10.74□□□□□ -0.69
RBBP4-210ENST00000475321 OSCARQ8IYS5 282 aa10.7□□□□□ -0.7
RBBP4-210ENST00000475321 REM2Q8IYK8 340 aaPredicted RBP10.65□□□□□ -0.7
RBBP4-210ENST00000475321 PIP4P2Q8N4L2 257 aa10.55□□□□□ -0.72
RBBP4-210ENST00000475321 PITPNM1O00562 1244 aa10.54□□□□□ -0.72
RBBP4-210ENST00000475321 FBLN2P98095 1184 aa10.51□□□□□ -0.73
RBBP4-210ENST00000475321 SPDYE2BA6NHP3 402 aa10.5□□□□□ -0.73
RBBP4-210ENST00000475321 SPDYE6P0CI01 402 aa10.5□□□□□ -0.73
RBBP4-210ENST00000475321 FXR2P51116 673 aaKnown RBP eCLIP10.5□□□□□ -0.73
RBBP4-210ENST00000475321 SPDYE2Q495Y8 402 aa10.5□□□□□ -0.73
RBBP4-210ENST00000475321 SP7Q8TDD2 431 aaPredicted RBP10.47□□□□□ -0.73
RBBP4-210ENST00000475321 MKRN4PQ13434 485 aaPredicted RBP10.45□□□□□ -0.74
RBBP4-210ENST00000475321 SSUH2Q9Y2M2 353 aa10.38□□□□□ -0.75
RBBP4-210ENST00000475321 HAX1O00165 279 aa10.33□□□□□ -0.76
RBBP4-210ENST00000475321 SPDYE1Q8NFV5 336 aaPredicted RBP10.33□□□□□ -0.76
RBBP4-210ENST00000475321 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
RBBP4-210ENST00000475321 PRKAR2AP13861 404 aaKnown RBP10.25□□□□□ -0.77
RBBP4-210ENST00000475321 CSRNP3Q8WYN3 585 aa10.25□□□□□ -0.77
RBBP4-210ENST00000475321 CLEC11AQ9Y240 323 aa10.25□□□□□ -0.77
RBBP4-210ENST00000475321 EVX2Q03828 476 aa10.23□□□□□ -0.77
RBBP4-210ENST00000475321 C19orf67A6NJJ6 358 aa10.17□□□□□ -0.78
RBBP4-210ENST00000475321 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
RBBP4-210ENST00000475321 PRR29P0C7W0 189 aa10.1□□□□□ -0.79
RBBP4-210ENST00000475321 CHADLQ6NUI6 762 aa10.09□□□□□ -0.79
RBBP4-210ENST00000475321 GABBR2O75899 941 aa10.01□□□□□ -0.81
RBBP4-210ENST00000475321 EHMT2Q96KQ7 1210 aa9.99□□□□□ -0.81
RBBP4-210ENST00000475321 FARP1Q9Y4F1 1045 aaPredicted RBP9.97□□□□□ -0.81
RBBP4-210ENST00000475321 CD44P16070 742 aaKnown RBP9.91□□□□□ -0.82
RBBP4-210ENST00000475321 STAG3Q9UJ98 1225 aa9.9□□□□□ -0.82
RBBP4-210ENST00000475321 SPDYE4A6NLX3 237 aa9.88□□□□□ -0.83
RBBP4-210ENST00000475321 CREBZFQ9NS37 354 aa9.87□□□□□ -0.83
RBBP4-210ENST00000475321 CLCN6P51797 869 aa9.86□□□□□ -0.83
RBBP4-210ENST00000475321 POTEIP0CG38 1075 aa9.81□□□□□ -0.84
RBBP4-210ENST00000475321 LHX8Q68G74 356 aa9.8□□□□□ -0.84
RBBP4-210ENST00000475321 ZNF579Q8NAF0 562 aaKnown RBP9.8□□□□□ -0.84
RBBP4-210ENST00000475321 ZRANB1Q9UGI0 708 aa9.75□□□□□ -0.85
RBBP4-210ENST00000475321 MNX1P50219 401 aaPredicted RBP9.71□□□□□ -0.86
RBBP4-210ENST00000475321 PROM2Q8N271 834 aa9.71□□□□□ -0.86
RBBP4-210ENST00000475321 DCBLD2Q96PD2 775 aa9.68□□□□□ -0.86
RBBP4-210ENST00000475321 NPM1P06748 294 aaKnown RBP eCLIP9.66□□□□□ -0.86
RBBP4-210ENST00000475321 GALR2O43603 387 aaPredicted RBP9.65□□□□□ -0.86
RBBP4-210ENST00000475321 PAK3O75914 559 aaPredicted RBP9.65□□□□□ -0.86
RBBP4-210ENST00000475321 PHF12Q96QT6 1004 aa9.61□□□□□ -0.87
RBBP4-210ENST00000475321 MS4A3Q96HJ5 214 aa9.5□□□□□ -0.89
RBBP4-210ENST00000475321 ASTLQ6HA08 431 aaPredicted RBP9.48□□□□□ -0.89
RBBP4-210ENST00000475321 PELP1Q8IZL8 1130 aaKnown RBP9.48□□□□□ -0.89
RBBP4-210ENST00000475321 CCDC61Q9Y6R9 512 aa9.48□□□□□ -0.89
RBBP4-210ENST00000475321 POTEB2H3BUK9 544 aa9.47□□□□□ -0.89
RBBP4-210ENST00000475321 OTUD5Q96G74 571 aa9.46□□□□□ -0.9
RBBP4-210ENST00000475321 ATMINO43313 823 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms