RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 AEBP2Q6ZN18 517 aaPredicted RBP27.33■■□□□ 1.97
FN1-219ENST00000474036 CHIC1Q5VXU3 224 aa25.95■■□□□ 1.74
FN1-219ENST00000474036 SENP3Q9H4L4 574 aaPredicted RBP23.09■■□□□ 1.29
FN1-219ENST00000474036 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
FN1-219ENST00000474036 FOXD1Q16676 465 aa21.64■■□□□ 1.05
FN1-219ENST00000474036 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
FN1-219ENST00000474036 PPP6R1Q9UPN7 881 aa20.41■□□□□ 0.86
FN1-219ENST00000474036 ADRA2BP18089 450 aa20.32■□□□□ 0.84
FN1-219ENST00000474036 PIAS4Q8N2W9 510 aaPredicted RBP20.18■□□□□ 0.82
FN1-219ENST00000474036 MSH5O43196 834 aa20.04■□□□□ 0.8
FN1-219ENST00000474036 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
FN1-219ENST00000474036 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
FN1-219ENST00000474036 DMRT2Q9Y5R5 561 aa18.39■□□□□ 0.53
FN1-219ENST00000474036 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
FN1-219ENST00000474036 PPP4R3CPQ6ZMV5 832 aa18.25■□□□□ 0.51
FN1-219ENST00000474036 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
FN1-219ENST00000474036 HOXD11P31277 338 aaPredicted RBP17.76■□□□□ 0.43
FN1-219ENST00000474036 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
FN1-219ENST00000474036 DCAF8L1A6NGE4 600 aa17.61■□□□□ 0.41
FN1-219ENST00000474036 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
FN1-219ENST00000474036 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
FN1-219ENST00000474036 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
FN1-219ENST00000474036 KCNA4P22459 653 aa17.18■□□□□ 0.34
FN1-219ENST00000474036 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
FN1-219ENST00000474036 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
FN1-219ENST00000474036 C1QBPQ07021 282 aaKnown RBP16.88■□□□□ 0.29
FN1-219ENST00000474036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
FN1-219ENST00000474036 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
FN1-219ENST00000474036 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
FN1-219ENST00000474036 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
FN1-219ENST00000474036 CAPN15O75808 1086 aa16.25■□□□□ 0.19
FN1-219ENST00000474036 DSG3P32926 999 aa16.17■□□□□ 0.18
FN1-219ENST00000474036 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
FN1-219ENST00000474036 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
FN1-219ENST00000474036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
FN1-219ENST00000474036 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
FN1-219ENST00000474036 ABCB7O75027 752 aa15.97■□□□□ 0.15
FN1-219ENST00000474036 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.15
FN1-219ENST00000474036 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
FN1-219ENST00000474036 APLP2Q06481 763 aa15.92■□□□□ 0.14
FN1-219ENST00000474036 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
FN1-219ENST00000474036 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
FN1-219ENST00000474036 ZBTB22O15209 634 aa15.87■□□□□ 0.13
FN1-219ENST00000474036 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.12
FN1-219ENST00000474036 POLA2Q14181 598 aa15.66■□□□□ 0.1
FN1-219ENST00000474036 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
FN1-219ENST00000474036 POTEHQ6S545 545 aa15.27■□□□□ 0.04
FN1-219ENST00000474036 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
FN1-219ENST00000474036 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
FN1-219ENST00000474036 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
FN1-219ENST00000474036 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
FN1-219ENST00000474036 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
FN1-219ENST00000474036 MKRN4PQ13434 485 aaPredicted RBP15.02■□□□□ -0
FN1-219ENST00000474036 CHRDL2Q6WN34 429 aa15.01□□□□□ -0.01
FN1-219ENST00000474036 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
FN1-219ENST00000474036 REM2Q8IYK8 340 aaPredicted RBP14.95□□□□□ -0.02
FN1-219ENST00000474036 FBLN2P98095 1184 aa14.91□□□□□ -0.02
FN1-219ENST00000474036 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
FN1-219ENST00000474036 SPDYE2BA6NHP3 402 aa14.8□□□□□ -0.04
FN1-219ENST00000474036 SPDYE6P0CI01 402 aa14.8□□□□□ -0.04
FN1-219ENST00000474036 SPDYE2Q495Y8 402 aa14.8□□□□□ -0.04
FN1-219ENST00000474036 PIP4P2Q8N4L2 257 aa14.72□□□□□ -0.05
FN1-219ENST00000474036 ZNF692Q9BU19 519 aaPredicted RBP14.68□□□□□ -0.06
FN1-219ENST00000474036 SSUH2Q9Y2M2 353 aa14.68□□□□□ -0.06
FN1-219ENST00000474036 FXR2P51116 673 aaKnown RBP eCLIP14.63□□□□□ -0.07
FN1-219ENST00000474036 CLEC11AQ9Y240 323 aa14.53□□□□□ -0.08
FN1-219ENST00000474036 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
FN1-219ENST00000474036 SPDYE1Q8NFV5 336 aaPredicted RBP14.5□□□□□ -0.09
FN1-219ENST00000474036 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
FN1-219ENST00000474036 HAX1O00165 279 aa14.36□□□□□ -0.11
FN1-219ENST00000474036 EVX2Q03828 476 aa14.36□□□□□ -0.11
FN1-219ENST00000474036 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
FN1-219ENST00000474036 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
FN1-219ENST00000474036 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
FN1-219ENST00000474036 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
FN1-219ENST00000474036 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
FN1-219ENST00000474036 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
FN1-219ENST00000474036 CREBZFQ9NS37 354 aa14.05□□□□□ -0.16
FN1-219ENST00000474036 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
FN1-219ENST00000474036 PROM2Q8N271 834 aa13.98□□□□□ -0.17
FN1-219ENST00000474036 GABBR2O75899 941 aa13.93□□□□□ -0.18
FN1-219ENST00000474036 CD44P16070 742 aaKnown RBP13.93□□□□□ -0.18
FN1-219ENST00000474036 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
FN1-219ENST00000474036 ZRANB1Q9UGI0 708 aa13.76□□□□□ -0.21
FN1-219ENST00000474036 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
FN1-219ENST00000474036 FKBP8Q14318 412 aa13.71□□□□□ -0.21
FN1-219ENST00000474036 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
FN1-219ENST00000474036 PHF12Q96QT6 1004 aa13.64□□□□□ -0.23
FN1-219ENST00000474036 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
FN1-219ENST00000474036 GALR2O43603 387 aaPredicted RBP13.62□□□□□ -0.23
FN1-219ENST00000474036 MIER1Q8N108 512 aa13.58□□□□□ -0.24
FN1-219ENST00000474036 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
FN1-219ENST00000474036 CLCN6P51797 869 aa13.54□□□□□ -0.24
FN1-219ENST00000474036 TSPYL2Q9H2G4 693 aaPredicted RBP13.52□□□□□ -0.25
FN1-219ENST00000474036 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
FN1-219ENST00000474036 LHX8Q68G74 356 aa13.47□□□□□ -0.25
FN1-219ENST00000474036 RASEFQ8IZ41 740 aa13.47□□□□□ -0.25
FN1-219ENST00000474036 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
FN1-219ENST00000474036 CCDC61Q9Y6R9 512 aa13.45□□□□□ -0.26
FN1-219ENST00000474036 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 232 ms