RNA–Protein interactions for RNA: ENST00000473034.5

RNF25-204, Transcript of ring finger protein 25, humanhuman

TSL 2

Gene RNF25, Length 1,807 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25-204ENST00000473034 NISCHQ9Y2I1 1504 aa31.12■■■□□ 2.57
RNF25-204ENST00000473034 CCDC180Q9P1Z9 1646 aa26.56■■□□□ 1.84
RNF25-204ENST00000473034 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
RNF25-204ENST00000473034 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
RNF25-204ENST00000473034 DCAF1Q9Y4B6 1507 aa25.71■■□□□ 1.71
RNF25-204ENST00000473034 SUPT5HO00267 1087 aaKnown RBP25.67■■□□□ 1.7
RNF25-204ENST00000473034 DCAF8L2P0C7V8 631 aa25.36■■□□□ 1.65
RNF25-204ENST00000473034 CHIC1Q5VXU3 224 aa25.16■■□□□ 1.62
RNF25-204ENST00000473034 MYO15BQ96JP2 1530 aa25.05■■□□□ 1.6
RNF25-204ENST00000473034 ABCC9O60706 1549 aa24.86■■□□□ 1.57
RNF25-204ENST00000473034 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
RNF25-204ENST00000473034 RSF1Q96T23 1441 aaPredicted RBP24.58■■□□□ 1.53
RNF25-204ENST00000473034 NACADO15069 1562 aa24.52■■□□□ 1.52
RNF25-204ENST00000473034 HRCP23327 699 aa24.39■■□□□ 1.49
RNF25-204ENST00000473034 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
RNF25-204ENST00000473034 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
RNF25-204ENST00000473034 PCGF6Q9BYE7 350 aa24.21■■□□□ 1.47
RNF25-204ENST00000473034 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
RNF25-204ENST00000473034 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
RNF25-204ENST00000473034 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
RNF25-204ENST00000473034 WIZO95785 1651 aa23.96■■□□□ 1.43
RNF25-204ENST00000473034 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
RNF25-204ENST00000473034 TRIM26Q12899 539 aaPredicted RBP23.92■■□□□ 1.42
RNF25-204ENST00000473034 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
RNF25-204ENST00000473034 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
RNF25-204ENST00000473034 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
RNF25-204ENST00000473034 PPARGC1BQ86YN6 1023 aaKnown RBP23.68■■□□□ 1.38
RNF25-204ENST00000473034 UNC13AQ9UPW8 1703 aa23.68■■□□□ 1.38
RNF25-204ENST00000473034 FAM9AQ8IZU1 332 aaPredicted RBP23.66■■□□□ 1.38
RNF25-204ENST00000473034 SMARCA2P51531 1590 aa23.54■■□□□ 1.36
RNF25-204ENST00000473034 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
RNF25-204ENST00000473034 ZEB1P37275 1124 aaPredicted RBP23.47■■□□□ 1.35
RNF25-204ENST00000473034 BICRAQ9NZM4 1560 aa23.41■■□□□ 1.34
RNF25-204ENST00000473034 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
RNF25-204ENST00000473034 PEG3Q9GZU2 1588 aa23.36■■□□□ 1.33
RNF25-204ENST00000473034 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
RNF25-204ENST00000473034 EEA1Q15075 1411 aa23.24■■□□□ 1.31
RNF25-204ENST00000473034 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
RNF25-204ENST00000473034 SOGA1O94964 1423 aa23.17■■□□□ 1.3
RNF25-204ENST00000473034 TNIKQ9UKE5 1360 aa23.15■■□□□ 1.3
RNF25-204ENST00000473034 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
RNF25-204ENST00000473034 CEP162Q5TB80 1403 aa23.1■■□□□ 1.29
RNF25-204ENST00000473034 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
RNF25-204ENST00000473034 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
RNF25-204ENST00000473034 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
RNF25-204ENST00000473034 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
RNF25-204ENST00000473034 SYNJ1O43426 1573 aa22.96■■□□□ 1.27
RNF25-204ENST00000473034 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.27
RNF25-204ENST00000473034 KIF21BO75037 1637 aa22.91■■□□□ 1.26
RNF25-204ENST00000473034 CEP164Q9UPV0 1460 aa22.88■■□□□ 1.25
RNF25-204ENST00000473034 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
RNF25-204ENST00000473034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.82■■□□□ 1.24
RNF25-204ENST00000473034 CCER1Q8TC90 406 aaPredicted RBP22.78■■□□□ 1.24
RNF25-204ENST00000473034 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
RNF25-204ENST00000473034 HMGXB3Q12766 1538 aa22.7■■□□□ 1.23
RNF25-204ENST00000473034 BIVM-ERCC5R4GMW8 1640 aa22.7■■□□□ 1.22
RNF25-204ENST00000473034 NCAPD3P42695 1498 aa22.68■■□□□ 1.22
RNF25-204ENST00000473034 CLIP1P30622 1438 aa22.67■■□□□ 1.22
RNF25-204ENST00000473034 RAPGEF2Q9Y4G8 1499 aa22.63■■□□□ 1.21
RNF25-204ENST00000473034 VPS8Q8N3P4 1428 aa22.63■■□□□ 1.21
RNF25-204ENST00000473034 TTBK1Q5TCY1 1321 aaPredicted RBP22.58■■□□□ 1.21
RNF25-204ENST00000473034 ERICH3Q5RHP9 1530 aa22.56■■□□□ 1.2
RNF25-204ENST00000473034 PRXQ9BXM0 1461 aa22.53■■□□□ 1.2
RNF25-204ENST00000473034 CFTRP13569 1480 aa22.47■■□□□ 1.19
RNF25-204ENST00000473034 CUX1P39880 1505 aa22.47■■□□□ 1.19
RNF25-204ENST00000473034 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
RNF25-204ENST00000473034 DIEXFQ68CQ4 756 aaKnown RBP22.38■■□□□ 1.17
RNF25-204ENST00000473034 ARAP1Q96P48 1450 aa22.36■■□□□ 1.17
RNF25-204ENST00000473034 KIF27Q86VH2 1401 aa22.36■■□□□ 1.17
RNF25-204ENST00000473034 APLP2Q06481 763 aa22.35■■□□□ 1.17
RNF25-204ENST00000473034 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
RNF25-204ENST00000473034 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
RNF25-204ENST00000473034 ZNF316A6NFI3 1004 aaPredicted RBP22.29■■□□□ 1.16
RNF25-204ENST00000473034 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
RNF25-204ENST00000473034 ACIN1Q9UKV3 1341 aaKnown RBP22.24■■□□□ 1.15
RNF25-204ENST00000473034 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
RNF25-204ENST00000473034 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
RNF25-204ENST00000473034 ARHGAP35Q9NRY4 1499 aa22.16■■□□□ 1.14
RNF25-204ENST00000473034 CLSPNQ9HAW4 1339 aa22.16■■□□□ 1.14
RNF25-204ENST00000473034 RRBP1Q9P2E9 1410 aaKnown RBP22.15■■□□□ 1.14
RNF25-204ENST00000473034 NEUROD1Q13562 356 aa22.15■■□□□ 1.14
RNF25-204ENST00000473034 IGF1RP08069 1367 aa22.13■■□□□ 1.13
RNF25-204ENST00000473034 KANK4Q5T7N3 995 aaPredicted RBP22.12■■□□□ 1.13
RNF25-204ENST00000473034 CENPBP07199 599 aaPredicted RBP22.1■■□□□ 1.13
RNF25-204ENST00000473034 CUX2O14529 1486 aa22.09■■□□□ 1.13
RNF25-204ENST00000473034 DHX57Q6P158 1386 aaKnown RBP22.06■■□□□ 1.12
RNF25-204ENST00000473034 MAP3K1Q13233 1512 aa22.06■■□□□ 1.12
RNF25-204ENST00000473034 FGD5Q6ZNL6 1462 aa22.04■■□□□ 1.12
RNF25-204ENST00000473034 PELP1Q8IZL8 1130 aaKnown RBP22.04■■□□□ 1.12
RNF25-204ENST00000473034 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
RNF25-204ENST00000473034 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
RNF25-204ENST00000473034 CCNB3Q8WWL7 1395 aa21.97■■□□□ 1.11
RNF25-204ENST00000473034 TIAM1Q13009 1591 aa21.94■■□□□ 1.1
RNF25-204ENST00000473034 FANCD2Q9BXW9 1451 aa21.92■■□□□ 1.1
RNF25-204ENST00000473034 DNMBPQ6XZF7 1577 aa21.9■■□□□ 1.1
RNF25-204ENST00000473034 MIER1Q8N108 512 aa21.89■■□□□ 1.09
RNF25-204ENST00000473034 GTF3C3Q9Y5Q9 886 aa21.89■■□□□ 1.09
RNF25-204ENST00000473034 ABCA10Q8WWZ4 1543 aa21.87■■□□□ 1.09
RNF25-204ENST00000473034 LRRC9Q6ZRR7 1453 aa21.85■■□□□ 1.09
RNF25-204ENST00000473034 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms