RNA–Protein interactions for RNA: ENST00000472823.5

GABBR1-208, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 4,286 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-208ENST00000472823 NISCHQ9Y2I1 1504 aa33.64■■■□□ 2.98
GABBR1-208ENST00000472823 DCAF8L2P0C7V8 631 aa31.86■■■□□ 2.69
GABBR1-208ENST00000472823 SUPT5HO00267 1087 aaKnown RBP31.62■■■□□ 2.65
GABBR1-208ENST00000472823 SHROOM4Q9ULL8 1493 aa31.39■■■□□ 2.62
GABBR1-208ENST00000472823 PCGF6Q9BYE7 350 aa30.19■■■□□ 2.42
GABBR1-208ENST00000472823 EHMT2Q96KQ7 1210 aa29.93■■■□□ 2.38
GABBR1-208ENST00000472823 FAM9AQ8IZU1 332 aaPredicted RBP29.57■■■□□ 2.32
GABBR1-208ENST00000472823 HRCP23327 699 aa29.49■■■□□ 2.31
GABBR1-208ENST00000472823 CHIC1Q5VXU3 224 aa29.37■■■□□ 2.29
GABBR1-208ENST00000472823 TRIM41Q8WV44 630 aa29.23■■■□□ 2.27
GABBR1-208ENST00000472823 ZEB1P37275 1124 aaPredicted RBP29.21■■■□□ 2.27
GABBR1-208ENST00000472823 LOC105371045A0A1W2PR82 267 aa29.06■■■□□ 2.24
GABBR1-208ENST00000472823 TRIM26Q12899 539 aaPredicted RBP29.03■■■□□ 2.24
GABBR1-208ENST00000472823 TTBK1Q5TCY1 1321 aaPredicted RBP29.02■■■□□ 2.24
GABBR1-208ENST00000472823 PPARGC1BQ86YN6 1023 aaKnown RBP28.98■■■□□ 2.23
GABBR1-208ENST00000472823 CCER1Q8TC90 406 aaPredicted RBP28.86■■■□□ 2.21
GABBR1-208ENST00000472823 PELP1Q8IZL8 1130 aaKnown RBP28.71■■■□□ 2.19
GABBR1-208ENST00000472823 APLP2Q06481 763 aa28.71■■■□□ 2.19
GABBR1-208ENST00000472823 CENPBP07199 599 aaPredicted RBP28.69■■■□□ 2.18
GABBR1-208ENST00000472823 UBTFP17480 764 aaKnown RBP28.39■■■□□ 2.14
GABBR1-208ENST00000472823 RANGAP1P46060 587 aaPredicted RBP28.32■■■□□ 2.12
GABBR1-208ENST00000472823 YTHDC1Q96MU7 727 aaKnown RBP28.23■■■□□ 2.11
GABBR1-208ENST00000472823 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
GABBR1-208ENST00000472823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.09■■■□□ 2.09
GABBR1-208ENST00000472823 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
GABBR1-208ENST00000472823 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
GABBR1-208ENST00000472823 DIEXFQ68CQ4 756 aaKnown RBP27.86■■■□□ 2.05
GABBR1-208ENST00000472823 MYT1Q01538 1121 aa27.8■■■□□ 2.04
GABBR1-208ENST00000472823 HNRNPUL2Q1KMD3 747 aaKnown RBP27.78■■■□□ 2.04
GABBR1-208ENST00000472823 ATP1B4Q9UN42 357 aaPredicted RBP27.6■■■□□ 2.01
GABBR1-208ENST00000472823 CCDC180Q9P1Z9 1646 aa27.57■■■□□ 2
GABBR1-208ENST00000472823 GTF3C3Q9Y5Q9 886 aa27.56■■■□□ 2
GABBR1-208ENST00000472823 ABCC9O60706 1549 aa27.45■■□□□ 1.98
GABBR1-208ENST00000472823 ACIN1Q9UKV3 1341 aaKnown RBP27.44■■□□□ 1.98
GABBR1-208ENST00000472823 ITGAEP38570 1179 aa27.44■■□□□ 1.98
GABBR1-208ENST00000472823 NEFLP07196 543 aa27.42■■□□□ 1.98
GABBR1-208ENST00000472823 ERICH6Q7L0X2 663 aa27.31■■□□□ 1.96
GABBR1-208ENST00000472823 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
GABBR1-208ENST00000472823 ZNF316A6NFI3 1004 aaPredicted RBP27.29■■□□□ 1.96
GABBR1-208ENST00000472823 SCAF1Q9H7N4 1312 aaKnown RBP27.23■■□□□ 1.95
GABBR1-208ENST00000472823 CSRNP3Q8WYN3 585 aa27.16■■□□□ 1.94
GABBR1-208ENST00000472823 NEUROD1Q13562 356 aa27.11■■□□□ 1.93
GABBR1-208ENST00000472823 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
GABBR1-208ENST00000472823 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
GABBR1-208ENST00000472823 FAM50AQ14320 339 aaKnown RBP26.79■■□□□ 1.88
GABBR1-208ENST00000472823 BCANQ96GW7 911 aa26.76■■□□□ 1.88
GABBR1-208ENST00000472823 MIER1Q8N108 512 aa26.65■■□□□ 1.86
GABBR1-208ENST00000472823 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
GABBR1-208ENST00000472823 CEP162Q5TB80 1403 aa26.61■■□□□ 1.85
GABBR1-208ENST00000472823 POLR3GLQ9BT43 218 aa26.56■■□□□ 1.84
GABBR1-208ENST00000472823 CNGB1Q14028 1251 aaPredicted RBP26.54■■□□□ 1.84
GABBR1-208ENST00000472823 ANP32CO43423 234 aa26.51■■□□□ 1.83
GABBR1-208ENST00000472823 CECR2Q9BXF3 1484 aa26.46■■□□□ 1.83
GABBR1-208ENST00000472823 CLIP1P30622 1438 aa26.43■■□□□ 1.82
GABBR1-208ENST00000472823 CLSPNQ9HAW4 1339 aa26.42■■□□□ 1.82
GABBR1-208ENST00000472823 TNIKQ9UKE5 1360 aa26.39■■□□□ 1.82
GABBR1-208ENST00000472823 EEA1Q15075 1411 aa26.39■■□□□ 1.82
GABBR1-208ENST00000472823 P3H3Q8IVL6 736 aa26.36■■□□□ 1.81
GABBR1-208ENST00000472823 GOLGA3Q08378 1498 aa26.36■■□□□ 1.81
GABBR1-208ENST00000472823 TRIM52Q96A61 297 aa26.34■■□□□ 1.81
GABBR1-208ENST00000472823 FKBP8Q14318 412 aa26.29■■□□□ 1.8
GABBR1-208ENST00000472823 DDX10Q13206 875 aaKnown RBP26.28■■□□□ 1.8
GABBR1-208ENST00000472823 NACADO15069 1562 aa26.26■■□□□ 1.79
GABBR1-208ENST00000472823 CDK11AQ9UQ88 783 aaPredicted RBP26.21■■□□□ 1.79
GABBR1-208ENST00000472823 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
GABBR1-208ENST00000472823 WRNQ14191 1432 aaPredicted RBP eCLIP26.2■■□□□ 1.79
GABBR1-208ENST00000472823 SOGA1O94964 1423 aa26.19■■□□□ 1.78
GABBR1-208ENST00000472823 BAZ1AQ9NRL2 1556 aaPredicted RBP26.15■■□□□ 1.78
GABBR1-208ENST00000472823 CEP164Q9UPV0 1460 aa26.1■■□□□ 1.77
GABBR1-208ENST00000472823 TONSLQ96HA7 1378 aa26.05■■□□□ 1.76
GABBR1-208ENST00000472823 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
GABBR1-208ENST00000472823 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
GABBR1-208ENST00000472823 DAXXQ9UER7 740 aaPredicted RBP26.03■■□□□ 1.76
GABBR1-208ENST00000472823 RTL5Q5HYW3 569 aaPredicted RBP26.02■■□□□ 1.76
GABBR1-208ENST00000472823 HIRIP3Q9BW71 556 aaPredicted RBP26■■□□□ 1.75
GABBR1-208ENST00000472823 ZNF326Q5BKZ1 582 aaKnown RBP25.99■■□□□ 1.75
GABBR1-208ENST00000472823 HNRNPUQ00839 825 aaKnown RBP eCLIP25.99■■□□□ 1.75
GABBR1-208ENST00000472823 WIZO95785 1651 aa25.92■■□□□ 1.74
GABBR1-208ENST00000472823 ARID3CA6NKF2 412 aa25.89■■□□□ 1.74
GABBR1-208ENST00000472823 SUPT16HQ9Y5B9 1047 aaKnown RBP25.86■■□□□ 1.73
GABBR1-208ENST00000472823 VPS8Q8N3P4 1428 aa25.82■■□□□ 1.72
GABBR1-208ENST00000472823 FAM9BQ8IZU0 186 aa25.78■■□□□ 1.72
GABBR1-208ENST00000472823 BAZ1BQ9UIG0 1483 aaKnown RBP25.78■■□□□ 1.72
GABBR1-208ENST00000472823 IRX6P78412 446 aaPredicted RBP25.74■■□□□ 1.71
GABBR1-208ENST00000472823 CHIC2Q9UKJ5 165 aa25.73■■□□□ 1.71
GABBR1-208ENST00000472823 SIN3AQ96ST3 1273 aa25.71■■□□□ 1.71
GABBR1-208ENST00000472823 KIF27Q86VH2 1401 aa25.7■■□□□ 1.7
GABBR1-208ENST00000472823 CCNB3Q8WWL7 1395 aa25.68■■□□□ 1.7
GABBR1-208ENST00000472823 MYT1LQ9UL68 1186 aa25.68■■□□□ 1.7
GABBR1-208ENST00000472823 ANP32EQ9BTT0 268 aa25.67■■□□□ 1.7
GABBR1-208ENST00000472823 MTUS2Q5JR59 1369 aa25.67■■□□□ 1.7
GABBR1-208ENST00000472823 KANK4Q5T7N3 995 aaPredicted RBP25.66■■□□□ 1.7
GABBR1-208ENST00000472823 TOP2AP11388 1531 aaKnown RBP25.65■■□□□ 1.7
GABBR1-208ENST00000472823 ANP32AP39687 249 aaKnown RBP25.64■■□□□ 1.7
GABBR1-208ENST00000472823 RUSC2Q8N2Y8 1516 aa25.62■■□□□ 1.69
GABBR1-208ENST00000472823 MRS2Q9HD23 443 aa25.61■■□□□ 1.69
GABBR1-208ENST00000472823 ZNF777Q9ULD5 760 aaPredicted RBP25.57■■□□□ 1.68
GABBR1-208ENST00000472823 EIF4G2P78344 907 aaKnown RBP eCLIP25.53■■□□□ 1.68
GABBR1-208ENST00000472823 RRP7BPQ9NSQ0 103 aa25.53■■□□□ 1.68
GABBR1-208ENST00000472823 NPM2Q86SE8 214 aaKnown RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms