RNA–Protein interactions for RNA: ENST00000472714.1

LAMB1-209, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 1,540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-209ENST00000472714 AEBP2Q6ZN18 517 aaPredicted RBP20.94■□□□□ 0.94
LAMB1-209ENST00000472714 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
LAMB1-209ENST00000472714 PHF23Q9BUL5 403 aaPredicted RBP17.97■□□□□ 0.47
LAMB1-209ENST00000472714 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
LAMB1-209ENST00000472714 FOXD1Q16676 465 aa16.75■□□□□ 0.27
LAMB1-209ENST00000472714 PLPPR3Q6T4P5 718 aa16.62■□□□□ 0.25
LAMB1-209ENST00000472714 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
LAMB1-209ENST00000472714 MSH5O43196 834 aa15.94■□□□□ 0.14
LAMB1-209ENST00000472714 PPP6R1Q9UPN7 881 aa15.84■□□□□ 0.13
LAMB1-209ENST00000472714 ADRA2BP18089 450 aa15.83■□□□□ 0.12
LAMB1-209ENST00000472714 PIAS4Q8N2W9 510 aaPredicted RBP15.56■□□□□ 0.08
LAMB1-209ENST00000472714 PPP4R3CPQ6ZMV5 832 aa14.62□□□□□ -0.07
LAMB1-209ENST00000472714 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
LAMB1-209ENST00000472714 MAPK8IP2Q13387 824 aaPredicted RBP14.36□□□□□ -0.11
LAMB1-209ENST00000472714 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
LAMB1-209ENST00000472714 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
LAMB1-209ENST00000472714 KCNA4P22459 653 aa14.23□□□□□ -0.13
LAMB1-209ENST00000472714 DMRT2Q9Y5R5 561 aa14.22□□□□□ -0.13
LAMB1-209ENST00000472714 CACNB1Q02641 598 aaPredicted RBP14.06□□□□□ -0.16
LAMB1-209ENST00000472714 NPM3O75607 178 aaKnown RBP14.01□□□□□ -0.17
LAMB1-209ENST00000472714 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
LAMB1-209ENST00000472714 HOXD11P31277 338 aaPredicted RBP13.93□□□□□ -0.18
LAMB1-209ENST00000472714 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
LAMB1-209ENST00000472714 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
LAMB1-209ENST00000472714 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
LAMB1-209ENST00000472714 RNF39Q9H2S5 420 aa13.52□□□□□ -0.25
LAMB1-209ENST00000472714 C1QBPQ07021 282 aaKnown RBP13.3□□□□□ -0.28
LAMB1-209ENST00000472714 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
LAMB1-209ENST00000472714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.291e-8■■□□□ 13.8
LAMB1-209ENST00000472714 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
LAMB1-209ENST00000472714 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
LAMB1-209ENST00000472714 ZBTB22O15209 634 aa13.08□□□□□ -0.31
LAMB1-209ENST00000472714 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
LAMB1-209ENST00000472714 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
LAMB1-209ENST00000472714 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
LAMB1-209ENST00000472714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.9□□□□□ -0.34
LAMB1-209ENST00000472714 HNRNPUL2Q1KMD3 747 aaKnown RBP12.9□□□□□ -0.34
LAMB1-209ENST00000472714 POTEHQ6S545 545 aa12.87□□□□□ -0.35
LAMB1-209ENST00000472714 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
LAMB1-209ENST00000472714 APLP2Q06481 763 aa12.78□□□□□ -0.36
LAMB1-209ENST00000472714 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
LAMB1-209ENST00000472714 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
LAMB1-209ENST00000472714 CAPN15O75808 1086 aa12.6□□□□□ -0.39
LAMB1-209ENST00000472714 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
LAMB1-209ENST00000472714 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
LAMB1-209ENST00000472714 TRHP20396 242 aaPredicted RBP12.52□□□□□ -0.4
LAMB1-209ENST00000472714 DSG3P32926 999 aa12.47□□□□□ -0.41
LAMB1-209ENST00000472714 ABCB7O75027 752 aa12.33□□□□□ -0.44
LAMB1-209ENST00000472714 POLA2Q14181 598 aa12.33□□□□□ -0.44
LAMB1-209ENST00000472714 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
LAMB1-209ENST00000472714 FBLN2P98095 1184 aa12.11□□□□□ -0.47
LAMB1-209ENST00000472714 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
LAMB1-209ENST00000472714 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
LAMB1-209ENST00000472714 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
LAMB1-209ENST00000472714 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
LAMB1-209ENST00000472714 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
LAMB1-209ENST00000472714 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
LAMB1-209ENST00000472714 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
LAMB1-209ENST00000472714 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
LAMB1-209ENST00000472714 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
LAMB1-209ENST00000472714 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
LAMB1-209ENST00000472714 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
LAMB1-209ENST00000472714 FKBP8Q14318 412 aa11.74□□□□□ -0.53
LAMB1-209ENST00000472714 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
LAMB1-209ENST00000472714 PROM2Q8N271 834 aa11.63□□□□□ -0.55
LAMB1-209ENST00000472714 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
LAMB1-209ENST00000472714 REM2Q8IYK8 340 aaPredicted RBP11.57□□□□□ -0.56
LAMB1-209ENST00000472714 SPDYE1Q8NFV5 336 aaPredicted RBP11.5□□□□□ -0.57
LAMB1-209ENST00000472714 PIP4P2Q8N4L2 257 aa11.48□□□□□ -0.57
LAMB1-209ENST00000472714 HAX1O00165 279 aa11.47□□□□□ -0.57
LAMB1-209ENST00000472714 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
LAMB1-209ENST00000472714 PITPNM1O00562 1244 aa11.43□□□□□ -0.58
LAMB1-209ENST00000472714 FBXO3Q9UK99 471 aa11.4□□□□□ -0.59
LAMB1-209ENST00000472714 CLEC11AQ9Y240 323 aa11.39□□□□□ -0.59
LAMB1-209ENST00000472714 PRR29P0C7W0 189 aa11.31□□□□□ -0.6
LAMB1-209ENST00000472714 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.66e-7■■□□□ 13.1
LAMB1-209ENST00000472714 EVX2Q03828 476 aa11.24□□□□□ -0.61
LAMB1-209ENST00000472714 VASPP50552 380 aaPredicted RBP11.21□□□□□ -0.61
LAMB1-209ENST00000472714 MIER1Q8N108 512 aa11.16□□□□□ -0.62
LAMB1-209ENST00000472714 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
LAMB1-209ENST00000472714 PLEKHG5O94827 1062 aa11.14□□□□□ -0.63
LAMB1-209ENST00000472714 PLCD3Q8N3E9 789 aa11.14□□□□□ -0.63
LAMB1-209ENST00000472714 PRKAR2AP13861 404 aaKnown RBP11.14□□□□□ -0.63
LAMB1-209ENST00000472714 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
LAMB1-209ENST00000472714 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
LAMB1-209ENST00000472714 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
LAMB1-209ENST00000472714 LHX8Q68G74 356 aa11.05□□□□□ -0.64
LAMB1-209ENST00000472714 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
LAMB1-209ENST00000472714 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
LAMB1-209ENST00000472714 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
LAMB1-209ENST00000472714 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
LAMB1-209ENST00000472714 C19orf67A6NJJ6 358 aa10.97□□□□□ -0.65
LAMB1-209ENST00000472714 GABBR2O75899 941 aa10.97□□□□□ -0.65
LAMB1-209ENST00000472714 SPOCK2Q92563 424 aa10.94□□□□□ -0.66
LAMB1-209ENST00000472714 NUBP1P53384 320 aa10.9□□□□□ -0.66
LAMB1-209ENST00000472714 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
LAMB1-209ENST00000472714 AMER1Q5JTC6 1135 aaPredicted RBP10.87□□□□□ -0.67
LAMB1-209ENST00000472714 RASEFQ8IZ41 740 aa10.84□□□□□ -0.67
LAMB1-209ENST00000472714 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
LAMB1-209ENST00000472714 CD44P16070 742 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms