RNA–Protein interactions for RNA: ENST00000472689.5

USP34-210, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 5

Gene USP34, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-210ENST00000472689 AEBP2Q6ZN18 517 aaPredicted RBP28.54■■■□□ 2.16
USP34-210ENST00000472689 CHIC1Q5VXU3 224 aa27.13■■□□□ 1.93
USP34-210ENST00000472689 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
USP34-210ENST00000472689 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
USP34-210ENST00000472689 FOXD1Q16676 465 aa22.71■■□□□ 1.23
USP34-210ENST00000472689 PLPPR3Q6T4P5 718 aa21.7■■□□□ 1.06
USP34-210ENST00000472689 MSH5O43196 834 aa21.32■■□□□ 1
USP34-210ENST00000472689 PIAS4Q8N2W9 510 aaPredicted RBP21.24■□□□□ 0.99
USP34-210ENST00000472689 PPP6R1Q9UPN7 881 aa21.2■□□□□ 0.98
USP34-210ENST00000472689 ADRA2BP18089 450 aa21.14■□□□□ 0.97
USP34-210ENST00000472689 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
USP34-210ENST00000472689 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
USP34-210ENST00000472689 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
USP34-210ENST00000472689 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
USP34-210ENST00000472689 PPP4R3CPQ6ZMV5 832 aa18.99■□□□□ 0.63
USP34-210ENST00000472689 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
USP34-210ENST00000472689 HOXD11P31277 338 aaPredicted RBP18.63■□□□□ 0.57
USP34-210ENST00000472689 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
USP34-210ENST00000472689 RNF216Q9NWF9 866 aaPredicted RBP18.5■□□□□ 0.55
USP34-210ENST00000472689 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
USP34-210ENST00000472689 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
USP34-210ENST00000472689 RNF39Q9H2S5 420 aa18.15■□□□□ 0.5
USP34-210ENST00000472689 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
USP34-210ENST00000472689 NPM3O75607 178 aaKnown RBP17.98■□□□□ 0.47
USP34-210ENST00000472689 C1QBPQ07021 282 aaKnown RBP17.92■□□□□ 0.46
USP34-210ENST00000472689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.43
USP34-210ENST00000472689 KCNA4P22459 653 aa17.61■□□□□ 0.41
USP34-210ENST00000472689 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
USP34-210ENST00000472689 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
USP34-210ENST00000472689 CAPN15O75808 1086 aa17.1■□□□□ 0.33
USP34-210ENST00000472689 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
USP34-210ENST00000472689 DSG3P32926 999 aa17■□□□□ 0.31
USP34-210ENST00000472689 APLP2Q06481 763 aa16.95■□□□□ 0.3
USP34-210ENST00000472689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.93■□□□□ 0.3
USP34-210ENST00000472689 HNRNPUL2Q1KMD3 747 aaKnown RBP16.93■□□□□ 0.3
USP34-210ENST00000472689 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
USP34-210ENST00000472689 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
USP34-210ENST00000472689 SAMD1Q6SPF0 538 aaPredicted RBP16.81■□□□□ 0.28
USP34-210ENST00000472689 ABCB7O75027 752 aa16.67■□□□□ 0.26
USP34-210ENST00000472689 MYCNP04198 464 aaPredicted RBP16.66■□□□□ 0.26
USP34-210ENST00000472689 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
USP34-210ENST00000472689 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
USP34-210ENST00000472689 POLA2Q14181 598 aa16.36■□□□□ 0.21
USP34-210ENST00000472689 POTEHQ6S545 545 aa16.3■□□□□ 0.2
USP34-210ENST00000472689 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
USP34-210ENST00000472689 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
USP34-210ENST00000472689 ZBTB22O15209 634 aa16.16■□□□□ 0.18
USP34-210ENST00000472689 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
USP34-210ENST00000472689 ATXN8OSP0DMR3 200 aa15.99■□□□□ 0.15
USP34-210ENST00000472689 CHRDL2Q6WN34 429 aa15.87■□□□□ 0.13
USP34-210ENST00000472689 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
USP34-210ENST00000472689 OSCARQ8IYS5 282 aa15.83■□□□□ 0.12
USP34-210ENST00000472689 REM2Q8IYK8 340 aaPredicted RBP15.7■□□□□ 0.1
USP34-210ENST00000472689 FBLN2P98095 1184 aa15.66■□□□□ 0.1
USP34-210ENST00000472689 SPDYE2BA6NHP3 402 aa15.56■□□□□ 0.08
USP34-210ENST00000472689 SPDYE6P0CI01 402 aa15.56■□□□□ 0.08
USP34-210ENST00000472689 SPDYE2Q495Y8 402 aa15.56■□□□□ 0.08
USP34-210ENST00000472689 PITPNM1O00562 1244 aa15.52■□□□□ 0.08
USP34-210ENST00000472689 MKRN4PQ13434 485 aaPredicted RBP15.48■□□□□ 0.07
USP34-210ENST00000472689 PIP4P2Q8N4L2 257 aa15.48■□□□□ 0.07
USP34-210ENST00000472689 CSRNP3Q8WYN3 585 aa15.43■□□□□ 0.06
USP34-210ENST00000472689 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.069e-7■■■□□ 15.4
USP34-210ENST00000472689 ZNF692Q9BU19 519 aaPredicted RBP15.36■□□□□ 0.05
USP34-210ENST00000472689 SSUH2Q9Y2M2 353 aa15.33■□□□□ 0.04
USP34-210ENST00000472689 SPDYE1Q8NFV5 336 aaPredicted RBP15.29■□□□□ 0.04
USP34-210ENST00000472689 SP7Q8TDD2 431 aaPredicted RBP15.28■□□□□ 0.04
USP34-210ENST00000472689 CLEC11AQ9Y240 323 aa15.25■□□□□ 0.03
USP34-210ENST00000472689 HAX1O00165 279 aa15.22■□□□□ 0.03
USP34-210ENST00000472689 EHMT2Q96KQ7 1210 aa15.22■□□□□ 0.03
USP34-210ENST00000472689 PRKAR2AP13861 404 aaKnown RBP15.13■□□□□ 0.01
USP34-210ENST00000472689 PABPN1Q86U42 306 aaKnown RBP eCLIP15.12■□□□□ 0.01
USP34-210ENST00000472689 PRR29P0C7W0 189 aa15.01□□□□□ -0.01
USP34-210ENST00000472689 EVX2Q03828 476 aa14.98□□□□□ -0.01
USP34-210ENST00000472689 CHADLQ6NUI6 762 aa14.93□□□□□ -0.02
USP34-210ENST00000472689 C19orf67A6NJJ6 358 aa14.9□□□□□ -0.02
USP34-210ENST00000472689 SPDYE4A6NLX3 237 aa14.78□□□□□ -0.04
USP34-210ENST00000472689 STAG3Q9UJ98 1225 aa14.75□□□□□ -0.05
USP34-210ENST00000472689 FARP1Q9Y4F1 1045 aaPredicted RBP14.74□□□□□ -0.05
USP34-210ENST00000472689 GABBR2O75899 941 aa14.69□□□□□ -0.06
USP34-210ENST00000472689 CD44P16070 742 aaKnown RBP14.65□□□□□ -0.06
USP34-210ENST00000472689 CREBZFQ9NS37 354 aa14.6□□□□□ -0.07
USP34-210ENST00000472689 CLCN6P51797 869 aa14.53□□□□□ -0.08
USP34-210ENST00000472689 ZRANB1Q9UGI0 708 aa14.45□□□□□ -0.1
USP34-210ENST00000472689 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
USP34-210ENST00000472689 PROM2Q8N271 834 aa14.41□□□□□ -0.1
USP34-210ENST00000472689 NPM1P06748 294 aaKnown RBP eCLIP14.38□□□□□ -0.11
USP34-210ENST00000472689 PAK3O75914 559 aaPredicted RBP14.36□□□□□ -0.11
USP34-210ENST00000472689 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
USP34-210ENST00000472689 MNX1P50219 401 aaPredicted RBP14.34□□□□□ -0.11
USP34-210ENST00000472689 LHX8Q68G74 356 aa14.33□□□□□ -0.12
USP34-210ENST00000472689 DCBLD2Q96PD2 775 aa14.31□□□□□ -0.12
USP34-210ENST00000472689 GALR2O43603 387 aaPredicted RBP14.23□□□□□ -0.13
USP34-210ENST00000472689 PHF12Q96QT6 1004 aa14.21□□□□□ -0.13
USP34-210ENST00000472689 PLEKHG5O94827 1062 aa14.15□□□□□ -0.14
USP34-210ENST00000472689 MIER1Q8N108 512 aa14.11□□□□□ -0.15
USP34-210ENST00000472689 TSPYL2Q9H2G4 693 aaPredicted RBP14.08□□□□□ -0.16
USP34-210ENST00000472689 MS4A3Q96HJ5 214 aa14.03□□□□□ -0.16
USP34-210ENST00000472689 CCDC61Q9Y6R9 512 aa14.03□□□□□ -0.16
USP34-210ENST00000472689 FKBP8Q14318 412 aa14.01□□□□□ -0.17
USP34-210ENST00000472689 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms