RNA–Protein interactions for RNA: ENST00000472515.1

ATRAID-204, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 2

Gene ATRAID, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-204ENST00000472515 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
ATRAID-204ENST00000472515 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
ATRAID-204ENST00000472515 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
ATRAID-204ENST00000472515 PHF23Q9BUL5 403 aaPredicted RBP18.1■□□□□ 0.49
ATRAID-204ENST00000472515 POTEDQ86YR6 584 aa17.75■□□□□ 0.43
ATRAID-204ENST00000472515 FOXD1Q16676 465 aa17.17■□□□□ 0.34
ATRAID-204ENST00000472515 MSH5O43196 834 aa16.41■□□□□ 0.22
ATRAID-204ENST00000472515 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
ATRAID-204ENST00000472515 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
ATRAID-204ENST00000472515 ADRA2BP18089 450 aa16■□□□□ 0.15
ATRAID-204ENST00000472515 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
ATRAID-204ENST00000472515 CACNB1Q02641 598 aaPredicted RBP14.72□□□□□ -0.05
ATRAID-204ENST00000472515 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
ATRAID-204ENST00000472515 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
ATRAID-204ENST00000472515 DMRT2Q9Y5R5 561 aa14.52□□□□□ -0.09
ATRAID-204ENST00000472515 PPP4R3CPQ6ZMV5 832 aa14.36□□□□□ -0.11
ATRAID-204ENST00000472515 CNKSR2Q8WXI2 1034 aa14.04□□□□□ -0.16
ATRAID-204ENST00000472515 DCAF8L1A6NGE4 600 aa14.03□□□□□ -0.16
ATRAID-204ENST00000472515 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
ATRAID-204ENST00000472515 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
ATRAID-204ENST00000472515 RNF216Q9NWF9 866 aaPredicted RBP13.89□□□□□ -0.19
ATRAID-204ENST00000472515 NCBP3Q53F19 620 aaKnown RBP13.77□□□□□ -0.21
ATRAID-204ENST00000472515 POTEHQ6S545 545 aa13.71□□□□□ -0.21
ATRAID-204ENST00000472515 C1QBPQ07021 282 aaKnown RBP13.65□□□□□ -0.22
ATRAID-204ENST00000472515 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
ATRAID-204ENST00000472515 KCNA4P22459 653 aa13.42□□□□□ -0.26
ATRAID-204ENST00000472515 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
ATRAID-204ENST00000472515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.27
ATRAID-204ENST00000472515 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
ATRAID-204ENST00000472515 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
ATRAID-204ENST00000472515 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
ATRAID-204ENST00000472515 CAPN15O75808 1086 aa12.9□□□□□ -0.34
ATRAID-204ENST00000472515 DSG3P32926 999 aa12.78□□□□□ -0.36
ATRAID-204ENST00000472515 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
ATRAID-204ENST00000472515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
ATRAID-204ENST00000472515 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
ATRAID-204ENST00000472515 APLP2Q06481 763 aa12.66□□□□□ -0.38
ATRAID-204ENST00000472515 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
ATRAID-204ENST00000472515 ABCB7O75027 752 aa12.64□□□□□ -0.39
ATRAID-204ENST00000472515 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
ATRAID-204ENST00000472515 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
ATRAID-204ENST00000472515 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
ATRAID-204ENST00000472515 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
ATRAID-204ENST00000472515 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
ATRAID-204ENST00000472515 POLA2Q14181 598 aa12.36□□□□□ -0.43
ATRAID-204ENST00000472515 ZBTB22O15209 634 aa12.34□□□□□ -0.43
ATRAID-204ENST00000472515 ATF5Q9Y2D1 282 aaPredicted RBP12.34□□□□□ -0.43
ATRAID-204ENST00000472515 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
ATRAID-204ENST00000472515 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
ATRAID-204ENST00000472515 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
ATRAID-204ENST00000472515 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
ATRAID-204ENST00000472515 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
ATRAID-204ENST00000472515 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
ATRAID-204ENST00000472515 HAX1O00165 279 aa11.85□□□□□ -0.51
ATRAID-204ENST00000472515 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
ATRAID-204ENST00000472515 FBLN2P98095 1184 aa11.8□□□□□ -0.52
ATRAID-204ENST00000472515 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
ATRAID-204ENST00000472515 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
ATRAID-204ENST00000472515 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
ATRAID-204ENST00000472515 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
ATRAID-204ENST00000472515 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
ATRAID-204ENST00000472515 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
ATRAID-204ENST00000472515 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
ATRAID-204ENST00000472515 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
ATRAID-204ENST00000472515 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
ATRAID-204ENST00000472515 EVX2Q03828 476 aa11.64□□□□□ -0.55
ATRAID-204ENST00000472515 LHX8Q68G74 356 aa11.6□□□□□ -0.55
ATRAID-204ENST00000472515 ZNF692Q9BU19 519 aaPredicted RBP11.6□□□□□ -0.55
ATRAID-204ENST00000472515 FXR2P51116 673 aaKnown RBP eCLIP11.55□□□□□ -0.56
ATRAID-204ENST00000472515 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
ATRAID-204ENST00000472515 SSUH2Q9Y2M2 353 aa11.54□□□□□ -0.56
ATRAID-204ENST00000472515 SPDYE1Q8NFV5 336 aaPredicted RBP11.48□□□□□ -0.57
ATRAID-204ENST00000472515 PABPN1Q86U42 306 aaKnown RBP eCLIP11.45□□□□□ -0.58
ATRAID-204ENST00000472515 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
ATRAID-204ENST00000472515 CHADLQ6NUI6 762 aa11.33□□□□□ -0.6
ATRAID-204ENST00000472515 GABBR2O75899 941 aa11.31□□□□□ -0.6
ATRAID-204ENST00000472515 PRR29P0C7W0 189 aa11.31□□□□□ -0.6
ATRAID-204ENST00000472515 C19orf67A6NJJ6 358 aa11.22□□□□□ -0.61
ATRAID-204ENST00000472515 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
ATRAID-204ENST00000472515 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
ATRAID-204ENST00000472515 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
ATRAID-204ENST00000472515 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
ATRAID-204ENST00000472515 CD44P16070 742 aaKnown RBP11.05□□□□□ -0.64
ATRAID-204ENST00000472515 CREBZFQ9NS37 354 aa11.04□□□□□ -0.64
ATRAID-204ENST00000472515 POTEMA6NI47 508 aa10.98□□□□□ -0.65
ATRAID-204ENST00000472515 POTEGQ6S5H5 508 aa10.92□□□□□ -0.66
ATRAID-204ENST00000472515 ZRANB1Q9UGI0 708 aa10.91□□□□□ -0.66
ATRAID-204ENST00000472515 PROM2Q8N271 834 aa10.87□□□□□ -0.67
ATRAID-204ENST00000472515 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
ATRAID-204ENST00000472515 MNX1P50219 401 aaPredicted RBP10.83□□□□□ -0.68
ATRAID-204ENST00000472515 ZNF579Q8NAF0 562 aaKnown RBP10.83□□□□□ -0.68
ATRAID-204ENST00000472515 PCDH10Q9P2E7 1040 aa10.81□□□□□ -0.68
ATRAID-204ENST00000472515 NPM1P06748 294 aaKnown RBP eCLIP10.8□□□□□ -0.68
ATRAID-204ENST00000472515 PAK3O75914 559 aaPredicted RBP10.79□□□□□ -0.68
ATRAID-204ENST00000472515 DCBLD2Q96PD2 775 aa10.78□□□□□ -0.68
ATRAID-204ENST00000472515 PHF12Q96QT6 1004 aa10.78□□□□□ -0.68
ATRAID-204ENST00000472515 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
ATRAID-204ENST00000472515 CLCN6P51797 869 aa10.75□□□□□ -0.69
ATRAID-204ENST00000472515 FKBP8Q14318 412 aa10.72□□□□□ -0.69
ATRAID-204ENST00000472515 MIER1Q8N108 512 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms