RNA–Protein interactions for RNA: ENST00000472463.1

AC007003.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC007003.1, Length 736 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007003.1-201ENST00000472463 AEBP2Q6ZN18 517 aaPredicted RBP21.67■■□□□ 1.06
AC007003.1-201ENST00000472463 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
AC007003.1-201ENST00000472463 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
AC007003.1-201ENST00000472463 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
AC007003.1-201ENST00000472463 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
AC007003.1-201ENST00000472463 FOXD1Q16676 465 aa17.01■□□□□ 0.31
AC007003.1-201ENST00000472463 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
AC007003.1-201ENST00000472463 ADRA2BP18089 450 aa16.47■□□□□ 0.23
AC007003.1-201ENST00000472463 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
AC007003.1-201ENST00000472463 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
AC007003.1-201ENST00000472463 MSH5O43196 834 aa15.6■□□□□ 0.09
AC007003.1-201ENST00000472463 PPP4R3CPQ6ZMV5 832 aa15.27■□□□□ 0.04
AC007003.1-201ENST00000472463 KCNA4P22459 653 aa15.1■□□□□ 0.01
AC007003.1-201ENST00000472463 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
AC007003.1-201ENST00000472463 MAPK8IP2Q13387 824 aaPredicted RBP14.91□□□□□ -0.02
AC007003.1-201ENST00000472463 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
AC007003.1-201ENST00000472463 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
AC007003.1-201ENST00000472463 NPM3O75607 178 aaKnown RBP14.7□□□□□ -0.06
AC007003.1-201ENST00000472463 DMRT2Q9Y5R5 561 aa14.65□□□□□ -0.06
AC007003.1-201ENST00000472463 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
AC007003.1-201ENST00000472463 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
AC007003.1-201ENST00000472463 RNF216Q9NWF9 866 aaPredicted RBP14.49□□□□□ -0.09
AC007003.1-201ENST00000472463 HOXD11P31277 338 aaPredicted RBP14.41□□□□□ -0.1
AC007003.1-201ENST00000472463 DNAJC5BQ9UF47 199 aa14.25□□□□□ -0.13
AC007003.1-201ENST00000472463 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
AC007003.1-201ENST00000472463 DCAF8L1A6NGE4 600 aa13.99□□□□□ -0.17
AC007003.1-201ENST00000472463 ZBTB22O15209 634 aa13.9□□□□□ -0.18
AC007003.1-201ENST00000472463 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
AC007003.1-201ENST00000472463 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
AC007003.1-201ENST00000472463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.22
AC007003.1-201ENST00000472463 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
AC007003.1-201ENST00000472463 MYCNP04198 464 aaPredicted RBP13.56□□□□□ -0.24
AC007003.1-201ENST00000472463 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
AC007003.1-201ENST00000472463 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
AC007003.1-201ENST00000472463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.35□□□□□ -0.27
AC007003.1-201ENST00000472463 HNRNPUL2Q1KMD3 747 aaKnown RBP13.35□□□□□ -0.27
AC007003.1-201ENST00000472463 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
AC007003.1-201ENST00000472463 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
AC007003.1-201ENST00000472463 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
AC007003.1-201ENST00000472463 C1QBPQ07021 282 aaKnown RBP13.23□□□□□ -0.29
AC007003.1-201ENST00000472463 APLP2Q06481 763 aa13.16□□□□□ -0.3
AC007003.1-201ENST00000472463 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
AC007003.1-201ENST00000472463 CAPN15O75808 1086 aa13.02□□□□□ -0.33
AC007003.1-201ENST00000472463 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
AC007003.1-201ENST00000472463 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
AC007003.1-201ENST00000472463 POLA2Q14181 598 aa12.83□□□□□ -0.36
AC007003.1-201ENST00000472463 ABCB7O75027 752 aa12.81□□□□□ -0.36
AC007003.1-201ENST00000472463 DSG3P32926 999 aa12.8□□□□□ -0.36
AC007003.1-201ENST00000472463 FKBP8Q14318 412 aa12.79□□□□□ -0.36
AC007003.1-201ENST00000472463 MKRN4PQ13434 485 aaPredicted RBP12.66□□□□□ -0.38
AC007003.1-201ENST00000472463 FBLN2P98095 1184 aa12.61□□□□□ -0.39
AC007003.1-201ENST00000472463 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
AC007003.1-201ENST00000472463 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
AC007003.1-201ENST00000472463 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
AC007003.1-201ENST00000472463 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
AC007003.1-201ENST00000472463 POTEHQ6S545 545 aa12.34□□□□□ -0.43
AC007003.1-201ENST00000472463 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
AC007003.1-201ENST00000472463 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
AC007003.1-201ENST00000472463 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
AC007003.1-201ENST00000472463 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
AC007003.1-201ENST00000472463 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
AC007003.1-201ENST00000472463 PROM2Q8N271 834 aa12.25□□□□□ -0.45
AC007003.1-201ENST00000472463 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
AC007003.1-201ENST00000472463 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
AC007003.1-201ENST00000472463 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
AC007003.1-201ENST00000472463 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
AC007003.1-201ENST00000472463 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
AC007003.1-201ENST00000472463 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
AC007003.1-201ENST00000472463 REM2Q8IYK8 340 aaPredicted RBP11.95□□□□□ -0.5
AC007003.1-201ENST00000472463 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
AC007003.1-201ENST00000472463 IFNLR1Q8IU57 520 aaPredicted RBP11.89□□□□□ -0.51
AC007003.1-201ENST00000472463 SPDYE1Q8NFV5 336 aaPredicted RBP11.88□□□□□ -0.51
AC007003.1-201ENST00000472463 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
AC007003.1-201ENST00000472463 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
AC007003.1-201ENST00000472463 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
AC007003.1-201ENST00000472463 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
AC007003.1-201ENST00000472463 SLC24A1O60721 1099 aa11.76□□□□□ -0.53
AC007003.1-201ENST00000472463 MIER1Q8N108 512 aa11.76□□□□□ -0.53
AC007003.1-201ENST00000472463 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
AC007003.1-201ENST00000472463 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
AC007003.1-201ENST00000472463 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
AC007003.1-201ENST00000472463 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
AC007003.1-201ENST00000472463 CREBZFQ9NS37 354 aa11.65□□□□□ -0.54
AC007003.1-201ENST00000472463 PKD2Q13563 968 aa11.63□□□□□ -0.55
AC007003.1-201ENST00000472463 DCAF8L2P0C7V8 631 aa11.62□□□□□ -0.55
AC007003.1-201ENST00000472463 CHRDL2Q6WN34 429 aa11.62□□□□□ -0.55
AC007003.1-201ENST00000472463 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
AC007003.1-201ENST00000472463 MNX1P50219 401 aaPredicted RBP11.56□□□□□ -0.56
AC007003.1-201ENST00000472463 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
AC007003.1-201ENST00000472463 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
AC007003.1-201ENST00000472463 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
AC007003.1-201ENST00000472463 PRKAR2AP13861 404 aaKnown RBP11.51□□□□□ -0.57
AC007003.1-201ENST00000472463 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
AC007003.1-201ENST00000472463 NUBP1P53384 320 aa11.45□□□□□ -0.58
AC007003.1-201ENST00000472463 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
AC007003.1-201ENST00000472463 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
AC007003.1-201ENST00000472463 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
AC007003.1-201ENST00000472463 PLCB2Q00722 1185 aa11.4□□□□□ -0.58
AC007003.1-201ENST00000472463 GSE1Q14687 1217 aa11.4□□□□□ -0.58
AC007003.1-201ENST00000472463 RGL2O15211 777 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms