RNA–Protein interactions for RNA: ENST00000472462.1

USP33-207, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-207ENST00000472462 AEBP2Q6ZN18 517 aaPredicted RBP26.7■■□□□ 1.86
USP33-207ENST00000472462 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
USP33-207ENST00000472462 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
USP33-207ENST00000472462 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
USP33-207ENST00000472462 FOXD1Q16676 465 aa21.21■□□□□ 0.99
USP33-207ENST00000472462 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
USP33-207ENST00000472462 PPP6R1Q9UPN7 881 aa19.91■□□□□ 0.78
USP33-207ENST00000472462 ADRA2BP18089 450 aa19.9■□□□□ 0.78
USP33-207ENST00000472462 PIAS4Q8N2W9 510 aaPredicted RBP19.9■□□□□ 0.78
USP33-207ENST00000472462 POTEDQ86YR6 584 aa19.88■□□□□ 0.77
USP33-207ENST00000472462 MSH5O43196 834 aa19.78■□□□□ 0.76
USP33-207ENST00000472462 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
USP33-207ENST00000472462 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
USP33-207ENST00000472462 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
USP33-207ENST00000472462 PPP4R3CPQ6ZMV5 832 aa17.89■□□□□ 0.45
USP33-207ENST00000472462 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
USP33-207ENST00000472462 DCAF8L1A6NGE4 600 aa17.47■□□□□ 0.39
USP33-207ENST00000472462 HOXD11P31277 338 aaPredicted RBP17.38■□□□□ 0.37
USP33-207ENST00000472462 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
USP33-207ENST00000472462 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.35
USP33-207ENST00000472462 CACNB1Q02641 598 aaPredicted RBP17.01■□□□□ 0.31
USP33-207ENST00000472462 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
USP33-207ENST00000472462 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
USP33-207ENST00000472462 KCNA4P22459 653 aa16.77■□□□□ 0.28
USP33-207ENST00000472462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.68■□□□□ 0.26
USP33-207ENST00000472462 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
USP33-207ENST00000472462 C1QBPQ07021 282 aaKnown RBP16.63■□□□□ 0.25
USP33-207ENST00000472462 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
USP33-207ENST00000472462 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
USP33-207ENST00000472462 CAPN15O75808 1086 aa16.08■□□□□ 0.16
USP33-207ENST00000472462 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
USP33-207ENST00000472462 DSG3P32926 999 aa15.86■□□□□ 0.13
USP33-207ENST00000472462 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
USP33-207ENST00000472462 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
USP33-207ENST00000472462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
USP33-207ENST00000472462 APLP2Q06481 763 aa15.82■□□□□ 0.12
USP33-207ENST00000472462 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
USP33-207ENST00000472462 SAMD1Q6SPF0 538 aaPredicted RBP15.75■□□□□ 0.11
USP33-207ENST00000472462 ABCB7O75027 752 aa15.74■□□□□ 0.11
USP33-207ENST00000472462 ZNF219Q9P2Y4 722 aaPredicted RBP15.73■□□□□ 0.11
USP33-207ENST00000472462 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
USP33-207ENST00000472462 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
USP33-207ENST00000472462 POTEHQ6S545 545 aa15.41■□□□□ 0.06
USP33-207ENST00000472462 ZBTB22O15209 634 aa15.4■□□□□ 0.06
USP33-207ENST00000472462 POLA2Q14181 598 aa15.38■□□□□ 0.05
USP33-207ENST00000472462 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
USP33-207ENST00000472462 RBM42Q9BTD8 480 aaKnown RBP15.13■□□□□ 0.01
USP33-207ENST00000472462 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
USP33-207ENST00000472462 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
USP33-207ENST00000472462 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
USP33-207ENST00000472462 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
USP33-207ENST00000472462 AKT1S1Q96B36 256 aa14.79□□□□□ -0.04
USP33-207ENST00000472462 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
USP33-207ENST00000472462 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
USP33-207ENST00000472462 FBLN2P98095 1184 aa14.75□□□□□ -0.05
USP33-207ENST00000472462 REM2Q8IYK8 340 aaPredicted RBP14.68□□□□□ -0.06
USP33-207ENST00000472462 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
USP33-207ENST00000472462 SPDYE2BA6NHP3 402 aa14.58□□□□□ -0.08
USP33-207ENST00000472462 SPDYE6P0CI01 402 aa14.58□□□□□ -0.08
USP33-207ENST00000472462 SPDYE2Q495Y8 402 aa14.58□□□□□ -0.08
USP33-207ENST00000472462 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
USP33-207ENST00000472462 PIP4P2Q8N4L2 257 aa14.47□□□□□ -0.09
USP33-207ENST00000472462 ZNF692Q9BU19 519 aaPredicted RBP14.47□□□□□ -0.09
USP33-207ENST00000472462 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
USP33-207ENST00000472462 SSUH2Q9Y2M2 353 aa14.37□□□□□ -0.11
USP33-207ENST00000472462 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
USP33-207ENST00000472462 SPDYE1Q8NFV5 336 aaPredicted RBP14.32□□□□□ -0.12
USP33-207ENST00000472462 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.13
USP33-207ENST00000472462 HAX1O00165 279 aa14.22□□□□□ -0.13
USP33-207ENST00000472462 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
USP33-207ENST00000472462 SP7Q8TDD2 431 aaPredicted RBP14.17□□□□□ -0.14
USP33-207ENST00000472462 PRR29P0C7W0 189 aa14.11□□□□□ -0.15
USP33-207ENST00000472462 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
USP33-207ENST00000472462 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
USP33-207ENST00000472462 EVX2Q03828 476 aa14.02□□□□□ -0.17
USP33-207ENST00000472462 C19orf67A6NJJ6 358 aa13.89□□□□□ -0.19
USP33-207ENST00000472462 STAG3Q9UJ98 1225 aa13.83□□□□□ -0.2
USP33-207ENST00000472462 FARP1Q9Y4F1 1045 aaPredicted RBP13.83□□□□□ -0.2
USP33-207ENST00000472462 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
USP33-207ENST00000472462 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
USP33-207ENST00000472462 GABBR2O75899 941 aa13.7□□□□□ -0.22
USP33-207ENST00000472462 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
USP33-207ENST00000472462 PROM2Q8N271 834 aa13.57□□□□□ -0.24
USP33-207ENST00000472462 NPM1P06748 294 aaKnown RBP eCLIP13.5□□□□□ -0.25
USP33-207ENST00000472462 PAK3O75914 559 aaPredicted RBP13.48□□□□□ -0.25
USP33-207ENST00000472462 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
USP33-207ENST00000472462 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
USP33-207ENST00000472462 FKBP8Q14318 412 aa13.46□□□□□ -0.25
USP33-207ENST00000472462 PHF12Q96QT6 1004 aa13.42□□□□□ -0.26
USP33-207ENST00000472462 POTEIP0CG38 1075 aa13.4□□□□□ -0.26
USP33-207ENST00000472462 CLCN6P51797 869 aa13.39□□□□□ -0.27
USP33-207ENST00000472462 MIER1Q8N108 512 aa13.39□□□□□ -0.27
USP33-207ENST00000472462 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
USP33-207ENST00000472462 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
USP33-207ENST00000472462 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
USP33-207ENST00000472462 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
USP33-207ENST00000472462 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
USP33-207ENST00000472462 LHX8Q68G74 356 aa13.3□□□□□ -0.28
USP33-207ENST00000472462 MS4A3Q96HJ5 214 aa13.22□□□□□ -0.29
USP33-207ENST00000472462 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms