RNA–Protein interactions for RNA: ENST00000471993.1

AC078828.1-201, humanhuman

TSL 3 BASIC

Gene AC078828.1, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078828.1-201ENST00000471993 AEBP2Q6ZN18 517 aaPredicted RBP37.43■■■■□ 3.58
AC078828.1-201ENST00000471993 CHIC1Q5VXU3 224 aa35.1■■■■□ 3.21
AC078828.1-201ENST00000471993 SENP3Q9H4L4 574 aaPredicted RBP31.98■■■□□ 2.71
AC078828.1-201ENST00000471993 PHF23Q9BUL5 403 aaPredicted RBP31.48■■■□□ 2.63
AC078828.1-201ENST00000471993 FOXD1Q16676 465 aa29.86■■■□□ 2.37
AC078828.1-201ENST00000471993 POTEDQ86YR6 584 aa28.21■■■□□ 2.11
AC078828.1-201ENST00000471993 MSH5O43196 834 aa28.12■■■□□ 2.09
AC078828.1-201ENST00000471993 PLPPR3Q6T4P5 718 aa27.82■■■□□ 2.04
AC078828.1-201ENST00000471993 PIAS4Q8N2W9 510 aaPredicted RBP27.77■■■□□ 2.04
AC078828.1-201ENST00000471993 PPP6R1Q9UPN7 881 aa27.57■■■□□ 2
AC078828.1-201ENST00000471993 ADRA2BP18089 450 aa27.43■■□□□ 1.98
AC078828.1-201ENST00000471993 MAPK8IP2Q13387 824 aaPredicted RBP25.32■■□□□ 1.64
AC078828.1-201ENST00000471993 DMRT2Q9Y5R5 561 aa25.3■■□□□ 1.64
AC078828.1-201ENST00000471993 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
AC078828.1-201ENST00000471993 CACNB1Q02641 598 aaPredicted RBP24.36■■□□□ 1.49
AC078828.1-201ENST00000471993 PPP4R3CPQ6ZMV5 832 aa24.31■■□□□ 1.48
AC078828.1-201ENST00000471993 HOXD11P31277 338 aaPredicted RBP24.21■■□□□ 1.47
AC078828.1-201ENST00000471993 DCAF8L1A6NGE4 600 aa24.18■■□□□ 1.46
AC078828.1-201ENST00000471993 CNKSR2Q8WXI2 1034 aa23.98■■□□□ 1.43
AC078828.1-201ENST00000471993 RNF39Q9H2S5 420 aa23.98■■□□□ 1.43
AC078828.1-201ENST00000471993 RNF216Q9NWF9 866 aaPredicted RBP23.9■■□□□ 1.42
AC078828.1-201ENST00000471993 C1QBPQ07021 282 aaKnown RBP23.58■■□□□ 1.37
AC078828.1-201ENST00000471993 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
AC078828.1-201ENST00000471993 NCBP3Q53F19 620 aaKnown RBP23.23■■□□□ 1.31
AC078828.1-201ENST00000471993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.98■■□□□ 1.27
AC078828.1-201ENST00000471993 NPM3O75607 178 aaKnown RBP22.93■■□□□ 1.26
AC078828.1-201ENST00000471993 U3KPZ7 1027 aaPredicted RBP22.51■■□□□ 1.19
AC078828.1-201ENST00000471993 SPINK5Q9NQ38 1064 aaPredicted RBP22.3■■□□□ 1.16
AC078828.1-201ENST00000471993 DSG3P32926 999 aa22.28■■□□□ 1.16
AC078828.1-201ENST00000471993 CAPN15O75808 1086 aa22.25■■□□□ 1.15
AC078828.1-201ENST00000471993 KCNA4P22459 653 aa22.08■■□□□ 1.13
AC078828.1-201ENST00000471993 SLC4A2P04920 1241 aa22.03■■□□□ 1.12
AC078828.1-201ENST00000471993 POTEHQ6S545 545 aa22.01■■□□□ 1.11
AC078828.1-201ENST00000471993 APLP2Q06481 763 aa21.8■■□□□ 1.08
AC078828.1-201ENST00000471993 TRHP20396 242 aaPredicted RBP21.77■■□□□ 1.08
AC078828.1-201ENST00000471993 ZNF219Q9P2Y4 722 aaPredicted RBP21.77■■□□□ 1.08
AC078828.1-201ENST00000471993 ABCB7O75027 752 aa21.7■■□□□ 1.06
AC078828.1-201ENST00000471993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
AC078828.1-201ENST00000471993 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
AC078828.1-201ENST00000471993 SAMD1Q6SPF0 538 aaPredicted RBP21.55■■□□□ 1.04
AC078828.1-201ENST00000471993 RBM42Q9BTD8 480 aaKnown RBP21.26■□□□□ 0.99
AC078828.1-201ENST00000471993 MYCNP04198 464 aaPredicted RBP21.21■□□□□ 0.99
AC078828.1-201ENST00000471993 POLA2Q14181 598 aa21.11■□□□□ 0.97
AC078828.1-201ENST00000471993 CHRDL2Q6WN34 429 aa20.97■□□□□ 0.95
AC078828.1-201ENST00000471993 ATF5Q9Y2D1 282 aaPredicted RBP20.77■□□□□ 0.92
AC078828.1-201ENST00000471993 FOXD4L1Q9NU39 408 aa20.75■□□□□ 0.91
AC078828.1-201ENST00000471993 SLC4A1APQ9BWU0 796 aaKnown RBP20.73■□□□□ 0.91
AC078828.1-201ENST00000471993 AKT1S1Q96B36 256 aa20.68■□□□□ 0.9
AC078828.1-201ENST00000471993 ZBTB12Q9Y330 459 aaPredicted RBP20.68■□□□□ 0.9
AC078828.1-201ENST00000471993 REM2Q8IYK8 340 aaPredicted RBP20.48■□□□□ 0.87
AC078828.1-201ENST00000471993 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
AC078828.1-201ENST00000471993 SP7Q8TDD2 431 aaPredicted RBP20.43■□□□□ 0.86
AC078828.1-201ENST00000471993 PIP4P2Q8N4L2 257 aa20.39■□□□□ 0.85
AC078828.1-201ENST00000471993 ZBTB22O15209 634 aa20.32■□□□□ 0.84
AC078828.1-201ENST00000471993 PITPNM1O00562 1244 aa20.28■□□□□ 0.84
AC078828.1-201ENST00000471993 FXR2P51116 673 aaKnown RBP eCLIP20.21■□□□□ 0.83
AC078828.1-201ENST00000471993 ATXN8OSP0DMR3 200 aa20.17■□□□□ 0.82
AC078828.1-201ENST00000471993 HAX1O00165 279 aa20.08■□□□□ 0.81
AC078828.1-201ENST00000471993 SPDYE2BA6NHP3 402 aa20■□□□□ 0.79
AC078828.1-201ENST00000471993 SPDYE6P0CI01 402 aa20■□□□□ 0.79
AC078828.1-201ENST00000471993 SPDYE2Q495Y8 402 aa20■□□□□ 0.79
AC078828.1-201ENST00000471993 FBLN2P98095 1184 aa19.95■□□□□ 0.78
AC078828.1-201ENST00000471993 EVX2Q03828 476 aa19.84■□□□□ 0.77
AC078828.1-201ENST00000471993 MKRN4PQ13434 485 aaPredicted RBP19.8■□□□□ 0.76
AC078828.1-201ENST00000471993 SPDYE1Q8NFV5 336 aaPredicted RBP19.75■□□□□ 0.75
AC078828.1-201ENST00000471993 PRKAR2AP13861 404 aaKnown RBP19.72■□□□□ 0.75
AC078828.1-201ENST00000471993 SSUH2Q9Y2M2 353 aa19.72■□□□□ 0.75
AC078828.1-201ENST00000471993 CLEC11AQ9Y240 323 aa19.69■□□□□ 0.74
AC078828.1-201ENST00000471993 ZNF692Q9BU19 519 aaPredicted RBP19.65■□□□□ 0.74
AC078828.1-201ENST00000471993 C19orf67A6NJJ6 358 aa19.58■□□□□ 0.72
AC078828.1-201ENST00000471993 CHADLQ6NUI6 762 aa19.39■□□□□ 0.69
AC078828.1-201ENST00000471993 GABBR2O75899 941 aa19.37■□□□□ 0.69
AC078828.1-201ENST00000471993 PABPN1Q86U42 306 aaKnown RBP eCLIP19.36■□□□□ 0.69
AC078828.1-201ENST00000471993 PRR29P0C7W0 189 aa19.32■□□□□ 0.68
AC078828.1-201ENST00000471993 LHX8Q68G74 356 aa19.13■□□□□ 0.65
AC078828.1-201ENST00000471993 FARP1Q9Y4F1 1045 aaPredicted RBP19.08■□□□□ 0.64
AC078828.1-201ENST00000471993 CD44P16070 742 aaKnown RBP19.07■□□□□ 0.64
AC078828.1-201ENST00000471993 POTEIP0CG38 1075 aa18.98■□□□□ 0.63
AC078828.1-201ENST00000471993 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
AC078828.1-201ENST00000471993 CLCN6P51797 869 aa18.93■□□□□ 0.62
AC078828.1-201ENST00000471993 ZNF579Q8NAF0 562 aaKnown RBP18.8■□□□□ 0.6
AC078828.1-201ENST00000471993 CREBZFQ9NS37 354 aa18.79■□□□□ 0.6
AC078828.1-201ENST00000471993 STAG3Q9UJ98 1225 aa18.74■□□□□ 0.59
AC078828.1-201ENST00000471993 DCBLD2Q96PD2 775 aa18.72■□□□□ 0.59
AC078828.1-201ENST00000471993 ZRANB1Q9UGI0 708 aa18.72■□□□□ 0.59
AC078828.1-201ENST00000471993 SPDYE4A6NLX3 237 aa18.59■□□□□ 0.57
AC078828.1-201ENST00000471993 GALR2O43603 387 aaPredicted RBP18.58■□□□□ 0.56
AC078828.1-201ENST00000471993 PAK3O75914 559 aaPredicted RBP18.45■□□□□ 0.54
AC078828.1-201ENST00000471993 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
AC078828.1-201ENST00000471993 PHF12Q96QT6 1004 aa18.43■□□□□ 0.54
AC078828.1-201ENST00000471993 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
AC078828.1-201ENST00000471993 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
AC078828.1-201ENST00000471993 OTUD5Q96G74 571 aa18.37■□□□□ 0.53
AC078828.1-201ENST00000471993 POTEB2H3BUK9 544 aa18.35■□□□□ 0.53
AC078828.1-201ENST00000471993 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
AC078828.1-201ENST00000471993 PLSCR2Q9NRY7 297 aa18.21■□□□□ 0.51
AC078828.1-201ENST00000471993 ASTLQ6HA08 431 aaPredicted RBP18.19■□□□□ 0.5
AC078828.1-201ENST00000471993 MS4A3Q96HJ5 214 aa18.19■□□□□ 0.5
AC078828.1-201ENST00000471993 PROM2Q8N271 834 aa18.17■□□□□ 0.5
AC078828.1-201ENST00000471993 ATMINO43313 823 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms