RNA–Protein interactions for RNA: ENST00000471885.5

PDCD10-207, Transcript of programmed cell death 10, humanhuman

TSL 5 BASIC

Gene PDCD10, Length 764 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-207ENST00000471885 AEBP2Q6ZN18 517 aaPredicted RBP33.33■■■□□ 2.93
PDCD10-207ENST00000471885 CHIC1Q5VXU3 224 aa32.72■■■□□ 2.83
PDCD10-207ENST00000471885 PHF23Q9BUL5 403 aaPredicted RBP28.78■■■□□ 2.2
PDCD10-207ENST00000471885 SENP3Q9H4L4 574 aaPredicted RBP28.29■■■□□ 2.12
PDCD10-207ENST00000471885 PLPPR3Q6T4P5 718 aa26.67■■□□□ 1.86
PDCD10-207ENST00000471885 FOXD1Q16676 465 aa26.21■■□□□ 1.79
PDCD10-207ENST00000471885 ADRA2BP18089 450 aa25.36■■□□□ 1.65
PDCD10-207ENST00000471885 PPP6R1Q9UPN7 881 aa25.34■■□□□ 1.65
PDCD10-207ENST00000471885 PIAS4Q8N2W9 510 aaPredicted RBP24.8■■□□□ 1.56
PDCD10-207ENST00000471885 MSH5O43196 834 aa24.12■■□□□ 1.45
PDCD10-207ENST00000471885 PPP4R3CPQ6ZMV5 832 aa23.52■■□□□ 1.36
PDCD10-207ENST00000471885 SCAF1Q9H7N4 1312 aaKnown RBP23.22■■□□□ 1.31
PDCD10-207ENST00000471885 KCNA4P22459 653 aa23.18■■□□□ 1.3
PDCD10-207ENST00000471885 NCBP3Q53F19 620 aaKnown RBP22.98■■□□□ 1.27
PDCD10-207ENST00000471885 MAPK8IP2Q13387 824 aaPredicted RBP22.94■■□□□ 1.26
PDCD10-207ENST00000471885 CNKSR2Q8WXI2 1034 aa22.82■■□□□ 1.24
PDCD10-207ENST00000471885 NPM3O75607 178 aaKnown RBP22.61■■□□□ 1.21
PDCD10-207ENST00000471885 DMRT2Q9Y5R5 561 aa22.59■■□□□ 1.21
PDCD10-207ENST00000471885 RNF216Q9NWF9 866 aaPredicted RBP22.33■■□□□ 1.17
PDCD10-207ENST00000471885 HOXD11P31277 338 aaPredicted RBP22.17■■□□□ 1.14
PDCD10-207ENST00000471885 SLC4A1APQ9BWU0 796 aaKnown RBP22.12■■□□□ 1.13
PDCD10-207ENST00000471885 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
PDCD10-207ENST00000471885 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
PDCD10-207ENST00000471885 DCAF8L1A6NGE4 600 aa21.68■■□□□ 1.06
PDCD10-207ENST00000471885 POTEDQ86YR6 584 aa21.65■■□□□ 1.06
PDCD10-207ENST00000471885 ZBTB22O15209 634 aa21.32■■□□□ 1
PDCD10-207ENST00000471885 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
PDCD10-207ENST00000471885 SLC4A2P04920 1241 aa21.3■■□□□ 1
PDCD10-207ENST00000471885 FOXD4L1Q9NU39 408 aa21.29■■□□□ 1
PDCD10-207ENST00000471885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.19■□□□□ 0.98
PDCD10-207ENST00000471885 MYCNP04198 464 aaPredicted RBP20.91■□□□□ 0.94
PDCD10-207ENST00000471885 U3KPZ7 1027 aaPredicted RBP20.84■□□□□ 0.93
PDCD10-207ENST00000471885 RNF39Q9H2S5 420 aa20.67■□□□□ 0.9
PDCD10-207ENST00000471885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.65■□□□□ 0.9
PDCD10-207ENST00000471885 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
PDCD10-207ENST00000471885 SAMD1Q6SPF0 538 aaPredicted RBP20.59■□□□□ 0.89
PDCD10-207ENST00000471885 ATXN8OSP0DMR3 200 aa20.51■□□□□ 0.87
PDCD10-207ENST00000471885 C1QBPQ07021 282 aaKnown RBP20.44■□□□□ 0.86
PDCD10-207ENST00000471885 APLP2Q06481 763 aa20.41■□□□□ 0.86
PDCD10-207ENST00000471885 ATF5Q9Y2D1 282 aaPredicted RBP20.31■□□□□ 0.84
PDCD10-207ENST00000471885 SPINK5Q9NQ38 1064 aaPredicted RBP20.21■□□□□ 0.83
PDCD10-207ENST00000471885 CAPN15O75808 1086 aa20.16■□□□□ 0.82
PDCD10-207ENST00000471885 TRHP20396 242 aaPredicted RBP20.1■□□□□ 0.81
PDCD10-207ENST00000471885 ZNF219Q9P2Y4 722 aaPredicted RBP20.09■□□□□ 0.81
PDCD10-207ENST00000471885 CACNB1Q02641 598 aaPredicted RBP20.04■□□□□ 0.8
PDCD10-207ENST00000471885 ABCB7O75027 752 aa19.79■□□□□ 0.76
PDCD10-207ENST00000471885 POLA2Q14181 598 aa19.79■□□□□ 0.76
PDCD10-207ENST00000471885 DSG3P32926 999 aa19.73■□□□□ 0.75
PDCD10-207ENST00000471885 FBLN2P98095 1184 aa19.5■□□□□ 0.71
PDCD10-207ENST00000471885 ZBTB12Q9Y330 459 aaPredicted RBP19.49■□□□□ 0.71
PDCD10-207ENST00000471885 MKRN4PQ13434 485 aaPredicted RBP19.44■□□□□ 0.7
PDCD10-207ENST00000471885 FKBP8Q14318 412 aa19.32■□□□□ 0.68
PDCD10-207ENST00000471885 SPDYE4A6NLX3 237 aa19.13■□□□□ 0.65
PDCD10-207ENST00000471885 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
PDCD10-207ENST00000471885 SPDYE2BA6NHP3 402 aa18.97■□□□□ 0.63
PDCD10-207ENST00000471885 SPDYE6P0CI01 402 aa18.97■□□□□ 0.63
PDCD10-207ENST00000471885 SPDYE2Q495Y8 402 aa18.97■□□□□ 0.63
PDCD10-207ENST00000471885 ZNF692Q9BU19 519 aaPredicted RBP18.93■□□□□ 0.62
PDCD10-207ENST00000471885 RBM42Q9BTD8 480 aaKnown RBP18.83■□□□□ 0.6
PDCD10-207ENST00000471885 SSUH2Q9Y2M2 353 aa18.82■□□□□ 0.6
PDCD10-207ENST00000471885 PROM2Q8N271 834 aa18.78■□□□□ 0.6
PDCD10-207ENST00000471885 PABPN1Q86U42 306 aaKnown RBP eCLIP18.69■□□□□ 0.58
PDCD10-207ENST00000471885 AKT1S1Q96B36 256 aa18.61■□□□□ 0.57
PDCD10-207ENST00000471885 FBXO3Q9UK99 471 aa18.58■□□□□ 0.56
PDCD10-207ENST00000471885 REM2Q8IYK8 340 aaPredicted RBP18.43■□□□□ 0.54
PDCD10-207ENST00000471885 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
PDCD10-207ENST00000471885 SPDYE1Q8NFV5 336 aaPredicted RBP18.37■□□□□ 0.53
PDCD10-207ENST00000471885 VASPP50552 380 aaPredicted RBP18.33■□□□□ 0.52
PDCD10-207ENST00000471885 CLEC11AQ9Y240 323 aa18.3■□□□□ 0.52
PDCD10-207ENST00000471885 PITPNM1O00562 1244 aa18.24■□□□□ 0.51
PDCD10-207ENST00000471885 PRR29P0C7W0 189 aa18.15■□□□□ 0.5
PDCD10-207ENST00000471885 PLCD3Q8N3E9 789 aa18.14■□□□□ 0.49
PDCD10-207ENST00000471885 MIER1Q8N108 512 aa18.12■□□□□ 0.49
PDCD10-207ENST00000471885 IFNLR1Q8IU57 520 aaPredicted RBP18.05■□□□□ 0.48
PDCD10-207ENST00000471885 PLEKHG5O94827 1062 aa18.04■□□□□ 0.48
PDCD10-207ENST00000471885 KLHL34Q8N239 644 aa17.99■□□□□ 0.47
PDCD10-207ENST00000471885 CHRDL2Q6WN34 429 aa17.97■□□□□ 0.47
PDCD10-207ENST00000471885 CREBZFQ9NS37 354 aa17.93■□□□□ 0.46
PDCD10-207ENST00000471885 ZBTB47Q9UFB7 747 aaPredicted RBP17.91■□□□□ 0.46
PDCD10-207ENST00000471885 AMER1Q5JTC6 1135 aaPredicted RBP17.9■□□□□ 0.46
PDCD10-207ENST00000471885 RTN4Q9NQC3 1192 aaKnown RBP17.85■□□□□ 0.45
PDCD10-207ENST00000471885 SPOCK2Q92563 424 aa17.84■□□□□ 0.45
PDCD10-207ENST00000471885 FXR2P51116 673 aaKnown RBP eCLIP17.83■□□□□ 0.44
PDCD10-207ENST00000471885 CHADLQ6NUI6 762 aa17.82■□□□□ 0.44
PDCD10-207ENST00000471885 PRKAR2AP13861 404 aaKnown RBP17.78■□□□□ 0.44
PDCD10-207ENST00000471885 PIP4P2Q8N4L2 257 aa17.77■□□□□ 0.44
PDCD10-207ENST00000471885 MNX1P50219 401 aaPredicted RBP17.74■□□□□ 0.43
PDCD10-207ENST00000471885 FARP1Q9Y4F1 1045 aaPredicted RBP17.67■□□□□ 0.42
PDCD10-207ENST00000471885 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
PDCD10-207ENST00000471885 NUBP1P53384 320 aa17.61■□□□□ 0.41
PDCD10-207ENST00000471885 CIZ1Q9ULV3 898 aaPredicted RBP17.56■□□□□ 0.4
PDCD10-207ENST00000471885 PKD2Q13563 968 aa17.52■□□□□ 0.4
PDCD10-207ENST00000471885 RASEFQ8IZ41 740 aa17.52■□□□□ 0.4
PDCD10-207ENST00000471885 FAM212AQ96EL1 285 aa17.51■□□□□ 0.39
PDCD10-207ENST00000471885 GSE1Q14687 1217 aa17.48■□□□□ 0.39
PDCD10-207ENST00000471885 DCAF8Q5TAQ9 597 aa17.48■□□□□ 0.39
PDCD10-207ENST00000471885 ECM2O94769 699 aaPredicted RBP17.42■□□□□ 0.38
PDCD10-207ENST00000471885 TSPYL2Q9H2G4 693 aaPredicted RBP17.39■□□□□ 0.37
PDCD10-207ENST00000471885 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
PDCD10-207ENST00000471885 PAK3O75914 559 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms