RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 AEBP2Q6ZN18 517 aaPredicted RBP19.7■□□□□ 0.74
CFHR3-205ENST00000471440 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
CFHR3-205ENST00000471440 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
CFHR3-205ENST00000471440 PHF23Q9BUL5 403 aaPredicted RBP16.71■□□□□ 0.27
CFHR3-205ENST00000471440 FOXD1Q16676 465 aa15.84■□□□□ 0.13
CFHR3-205ENST00000471440 POTEDQ86YR6 584 aa15.35■□□□□ 0.05
CFHR3-205ENST00000471440 MSH5O43196 834 aa15.14■□□□□ 0.01
CFHR3-205ENST00000471440 PIAS4Q8N2W9 510 aaPredicted RBP14.73□□□□□ -0.05
CFHR3-205ENST00000471440 PLPPR3Q6T4P5 718 aa14.6□□□□□ -0.07
CFHR3-205ENST00000471440 PPP6R1Q9UPN7 881 aa14.42□□□□□ -0.1
CFHR3-205ENST00000471440 ADRA2BP18089 450 aa14.36□□□□□ -0.11
CFHR3-205ENST00000471440 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
CFHR3-205ENST00000471440 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
CFHR3-205ENST00000471440 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
CFHR3-205ENST00000471440 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
CFHR3-205ENST00000471440 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
CFHR3-205ENST00000471440 PPP4R3CPQ6ZMV5 832 aa12.81□□□□□ -0.36
CFHR3-205ENST00000471440 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
CFHR3-205ENST00000471440 RNF39Q9H2S5 420 aa12.78□□□□□ -0.36
CFHR3-205ENST00000471440 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
CFHR3-205ENST00000471440 CNKSR2Q8WXI2 1034 aa12.61□□□□□ -0.39
CFHR3-205ENST00000471440 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
CFHR3-205ENST00000471440 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
CFHR3-205ENST00000471440 KCNA4P22459 653 aa12.54□□□□□ -0.4
CFHR3-205ENST00000471440 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
CFHR3-205ENST00000471440 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
CFHR3-205ENST00000471440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.19□□□□□ -0.46
CFHR3-205ENST00000471440 POTEHQ6S545 545 aa11.98□□□□□ -0.49
CFHR3-205ENST00000471440 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
CFHR3-205ENST00000471440 DSG3P32926 999 aa11.81□□□□□ -0.52
CFHR3-205ENST00000471440 CAPN15O75808 1086 aa11.8□□□□□ -0.52
CFHR3-205ENST00000471440 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
CFHR3-205ENST00000471440 SPINK5Q9NQ38 1064 aaPredicted RBP11.7□□□□□ -0.54
CFHR3-205ENST00000471440 APLP2Q06481 763 aa11.68□□□□□ -0.54
CFHR3-205ENST00000471440 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
CFHR3-205ENST00000471440 EHMT2Q96KQ7 1210 aa11.62□□□□□ -0.55
CFHR3-205ENST00000471440 ZNF219Q9P2Y4 722 aaPredicted RBP11.56□□□□□ -0.56
CFHR3-205ENST00000471440 ZBTB22O15209 634 aa11.54□□□□□ -0.56
CFHR3-205ENST00000471440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.52□□□□□ -0.56
CFHR3-205ENST00000471440 HNRNPUL2Q1KMD3 747 aaKnown RBP11.52□□□□□ -0.56
CFHR3-205ENST00000471440 FOXD4L1Q9NU39 408 aa11.52□□□□□ -0.56
CFHR3-205ENST00000471440 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
CFHR3-205ENST00000471440 CSRNP3Q8WYN3 585 aa11.45□□□□□ -0.58
CFHR3-205ENST00000471440 RBM42Q9BTD8 480 aaKnown RBP11.43□□□□□ -0.58
CFHR3-205ENST00000471440 ABCB7O75027 752 aa11.41□□□□□ -0.58
CFHR3-205ENST00000471440 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
CFHR3-205ENST00000471440 MYCNP04198 464 aaPredicted RBP11.36□□□□□ -0.59
CFHR3-205ENST00000471440 CHRDL2Q6WN34 429 aa11.23□□□□□ -0.61
CFHR3-205ENST00000471440 POLA2Q14181 598 aa11.1□□□□□ -0.63
CFHR3-205ENST00000471440 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
CFHR3-205ENST00000471440 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
CFHR3-205ENST00000471440 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
CFHR3-205ENST00000471440 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
CFHR3-205ENST00000471440 ZBTB12Q9Y330 459 aaPredicted RBP11□□□□□ -0.65
CFHR3-205ENST00000471440 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
CFHR3-205ENST00000471440 PIP4P2Q8N4L2 257 aa10.85□□□□□ -0.67
CFHR3-205ENST00000471440 HAX1O00165 279 aa10.8□□□□□ -0.68
CFHR3-205ENST00000471440 FXR2P51116 673 aaKnown RBP eCLIP10.76□□□□□ -0.69
CFHR3-205ENST00000471440 PITPNM1O00562 1244 aa10.7□□□□□ -0.7
CFHR3-205ENST00000471440 OSCARQ8IYS5 282 aa10.7□□□□□ -0.7
CFHR3-205ENST00000471440 MKRN4PQ13434 485 aaPredicted RBP10.59□□□□□ -0.71
CFHR3-205ENST00000471440 FBLN2P98095 1184 aa10.59□□□□□ -0.71
CFHR3-205ENST00000471440 SLC24A1O60721 1099 aa10.57□□□□□ -0.72
CFHR3-205ENST00000471440 SPDYE2BA6NHP3 402 aa10.56□□□□□ -0.72
CFHR3-205ENST00000471440 SPDYE6P0CI01 402 aa10.56□□□□□ -0.72
CFHR3-205ENST00000471440 SPDYE2Q495Y8 402 aa10.56□□□□□ -0.72
CFHR3-205ENST00000471440 EVX2Q03828 476 aa10.49□□□□□ -0.73
CFHR3-205ENST00000471440 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
CFHR3-205ENST00000471440 PRKAR2AP13861 404 aaKnown RBP10.46□□□□□ -0.74
CFHR3-205ENST00000471440 C19orf67A6NJJ6 358 aa10.43□□□□□ -0.74
CFHR3-205ENST00000471440 RTN4Q9NQC3 1192 aaKnown RBP10.41□□□□□ -0.74
CFHR3-205ENST00000471440 CLEC11AQ9Y240 323 aa10.39□□□□□ -0.75
CFHR3-205ENST00000471440 FKBP8Q14318 412 aa10.37□□□□□ -0.75
CFHR3-205ENST00000471440 LHX8Q68G74 356 aa10.36□□□□□ -0.75
CFHR3-205ENST00000471440 GABBR2O75899 941 aa10.35□□□□□ -0.75
CFHR3-205ENST00000471440 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
CFHR3-205ENST00000471440 ZNF692Q9BU19 519 aaPredicted RBP10.32□□□□□ -0.76
CFHR3-205ENST00000471440 SSUH2Q9Y2M2 353 aa10.3□□□□□ -0.76
CFHR3-205ENST00000471440 CLCN6P51797 869 aa10.27□□□□□ -0.77
CFHR3-205ENST00000471440 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
CFHR3-205ENST00000471440 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
CFHR3-205ENST00000471440 AMER1Q5JTC6 1135 aaPredicted RBP10.17□□□□□ -0.78
CFHR3-205ENST00000471440 CHADLQ6NUI6 762 aa10.16□□□□□ -0.78
CFHR3-205ENST00000471440 PROM2Q8N271 834 aa10.15□□□□□ -0.78
CFHR3-205ENST00000471440 CD44P16070 742 aaKnown RBP10.1□□□□□ -0.79
CFHR3-205ENST00000471440 FARP1Q9Y4F1 1045 aaPredicted RBP10.07□□□□□ -0.8
CFHR3-205ENST00000471440 POTEIP0CG38 1075 aa10.05□□□□□ -0.8
CFHR3-205ENST00000471440 DCBLD2Q96PD2 775 aa10.05□□□□□ -0.8
CFHR3-205ENST00000471440 PLSCR2Q9NRY7 297 aa9.99□□□□□ -0.81
CFHR3-205ENST00000471440 STAG3Q9UJ98 1225 aa9.97□□□□□ -0.81
CFHR3-205ENST00000471440 ZNF579Q8NAF0 562 aaKnown RBP9.96□□□□□ -0.81
CFHR3-205ENST00000471440 FBXO3Q9UK99 471 aa9.96□□□□□ -0.81
CFHR3-205ENST00000471440 ZRANB1Q9UGI0 708 aa9.9□□□□□ -0.82
CFHR3-205ENST00000471440 VASPP50552 380 aaPredicted RBP9.86□□□□□ -0.83
CFHR3-205ENST00000471440 PAK3O75914 559 aaPredicted RBP9.84□□□□□ -0.83
CFHR3-205ENST00000471440 PCDH10Q9P2E7 1040 aa9.81□□□□□ -0.84
CFHR3-205ENST00000471440 MIER1Q8N108 512 aa9.8□□□□□ -0.84
CFHR3-205ENST00000471440 PLCD3Q8N3E9 789 aa9.8□□□□□ -0.84
CFHR3-205ENST00000471440 CREBZFQ9NS37 354 aa9.8□□□□□ -0.84
CFHR3-205ENST00000471440 OTUD5Q96G74 571 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms