RNA–Protein interactions for RNA: ENST00000471155.5

TRIM59-203, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-203ENST00000471155 AEBP2Q6ZN18 517 aaPredicted RBP19■□□□□ 0.63
TRIM59-203ENST00000471155 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
TRIM59-203ENST00000471155 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
TRIM59-203ENST00000471155 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
TRIM59-203ENST00000471155 PLPPR3Q6T4P5 718 aa15.32■□□□□ 0.04
TRIM59-203ENST00000471155 FOXD1Q16676 465 aa14.89□□□□□ -0.03
TRIM59-203ENST00000471155 ADRA2BP18089 450 aa14.53□□□□□ -0.08
TRIM59-203ENST00000471155 PPP6R1Q9UPN7 881 aa14.53□□□□□ -0.08
TRIM59-203ENST00000471155 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
TRIM59-203ENST00000471155 MSH5O43196 834 aa13.6□□□□□ -0.23
TRIM59-203ENST00000471155 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
TRIM59-203ENST00000471155 KCNA4P22459 653 aa13.51□□□□□ -0.25
TRIM59-203ENST00000471155 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
TRIM59-203ENST00000471155 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
TRIM59-203ENST00000471155 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
TRIM59-203ENST00000471155 CNKSR2Q8WXI2 1034 aa13.1□□□□□ -0.31
TRIM59-203ENST00000471155 NPM3O75607 178 aaKnown RBP13.07□□□□□ -0.32
TRIM59-203ENST00000471155 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
TRIM59-203ENST00000471155 DMRT2Q9Y5R5 561 aa12.85□□□□□ -0.35
TRIM59-203ENST00000471155 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
TRIM59-203ENST00000471155 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
TRIM59-203ENST00000471155 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
TRIM59-203ENST00000471155 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
TRIM59-203ENST00000471155 CSRNP3Q8WYN3 585 aa12.55□□□□□ -0.4
TRIM59-203ENST00000471155 ZBTB22O15209 634 aa12.44□□□□□ -0.42
TRIM59-203ENST00000471155 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
TRIM59-203ENST00000471155 DCAF8L1A6NGE4 600 aa12.32□□□□□ -0.44
TRIM59-203ENST00000471155 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
TRIM59-203ENST00000471155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRIM59-203ENST00000471155 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
TRIM59-203ENST00000471155 POTEDQ86YR6 584 aa12.02□□□□□ -0.49
TRIM59-203ENST00000471155 U3KPZ7 1027 aaPredicted RBP11.93□□□□□ -0.5
TRIM59-203ENST00000471155 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
TRIM59-203ENST00000471155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
TRIM59-203ENST00000471155 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
TRIM59-203ENST00000471155 SAMD1Q6SPF0 538 aaPredicted RBP11.79□□□□□ -0.52
TRIM59-203ENST00000471155 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
TRIM59-203ENST00000471155 RNF39Q9H2S5 420 aa11.69□□□□□ -0.54
TRIM59-203ENST00000471155 APLP2Q06481 763 aa11.63□□□□□ -0.55
TRIM59-203ENST00000471155 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
TRIM59-203ENST00000471155 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
TRIM59-203ENST00000471155 ZNF219Q9P2Y4 722 aaPredicted RBP11.52□□□□□ -0.57
TRIM59-203ENST00000471155 TRHP20396 242 aaPredicted RBP11.49□□□□□ -0.57
TRIM59-203ENST00000471155 CAPN15O75808 1086 aa11.48□□□□□ -0.57
TRIM59-203ENST00000471155 POLA2Q14181 598 aa11.34□□□□□ -0.59
TRIM59-203ENST00000471155 FKBP8Q14318 412 aa11.34□□□□□ -0.59
TRIM59-203ENST00000471155 ABCB7O75027 752 aa11.3□□□□□ -0.6
TRIM59-203ENST00000471155 CACNB1Q02641 598 aaPredicted RBP11.24□□□□□ -0.61
TRIM59-203ENST00000471155 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
TRIM59-203ENST00000471155 DSG3P32926 999 aa11.22□□□□□ -0.61
TRIM59-203ENST00000471155 FBLN2P98095 1184 aa11.2□□□□□ -0.62
TRIM59-203ENST00000471155 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
TRIM59-203ENST00000471155 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
TRIM59-203ENST00000471155 OSCARQ8IYS5 282 aa10.96□□□□□ -0.65
TRIM59-203ENST00000471155 PROM2Q8N271 834 aa10.92□□□□□ -0.66
TRIM59-203ENST00000471155 ZNF692Q9BU19 519 aaPredicted RBP10.88□□□□□ -0.67
TRIM59-203ENST00000471155 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
TRIM59-203ENST00000471155 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
TRIM59-203ENST00000471155 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
TRIM59-203ENST00000471155 FBXO3Q9UK99 471 aa10.83□□□□□ -0.68
TRIM59-203ENST00000471155 SSUH2Q9Y2M2 353 aa10.81□□□□□ -0.68
TRIM59-203ENST00000471155 PABPN1Q86U42 306 aaKnown RBP eCLIP10.75□□□□□ -0.69
TRIM59-203ENST00000471155 RTN4Q9NQC3 1192 aaKnown RBP10.72□□□□□ -0.69
TRIM59-203ENST00000471155 VASPP50552 380 aaPredicted RBP10.7□□□□□ -0.7
TRIM59-203ENST00000471155 AMER1Q5JTC6 1135 aaPredicted RBP10.7□□□□□ -0.7
TRIM59-203ENST00000471155 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.7
TRIM59-203ENST00000471155 STAG3Q9UJ98 1225 aa10.6□□□□□ -0.71
TRIM59-203ENST00000471155 IFNLR1Q8IU57 520 aaPredicted RBP10.58□□□□□ -0.72
TRIM59-203ENST00000471155 AKT1S1Q96B36 256 aa10.58□□□□□ -0.72
TRIM59-203ENST00000471155 REM2Q8IYK8 340 aaPredicted RBP10.51□□□□□ -0.73
TRIM59-203ENST00000471155 PLCD3Q8N3E9 789 aa10.51□□□□□ -0.73
TRIM59-203ENST00000471155 MIER1Q8N108 512 aa10.5□□□□□ -0.73
TRIM59-203ENST00000471155 SPDYE1Q8NFV5 336 aaPredicted RBP10.49□□□□□ -0.73
TRIM59-203ENST00000471155 KLHL34Q8N239 644 aa10.48□□□□□ -0.73
TRIM59-203ENST00000471155 CLEC11AQ9Y240 323 aa10.47□□□□□ -0.73
TRIM59-203ENST00000471155 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
TRIM59-203ENST00000471155 PITPNM1O00562 1244 aa10.39□□□□□ -0.75
TRIM59-203ENST00000471155 PLEKHG5O94827 1062 aa10.39□□□□□ -0.75
TRIM59-203ENST00000471155 PRR29P0C7W0 189 aa10.39□□□□□ -0.75
TRIM59-203ENST00000471155 ZBTB47Q9UFB7 747 aaPredicted RBP10.33□□□□□ -0.76
TRIM59-203ENST00000471155 PKD2Q13563 968 aa10.32□□□□□ -0.76
TRIM59-203ENST00000471155 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
TRIM59-203ENST00000471155 MNX1P50219 401 aaPredicted RBP10.23□□□□□ -0.77
TRIM59-203ENST00000471155 CIZ1Q9ULV3 898 aaPredicted RBP10.23□□□□□ -0.77
TRIM59-203ENST00000471155 ECM2O94769 699 aaPredicted RBP10.21□□□□□ -0.77
TRIM59-203ENST00000471155 CHADLQ6NUI6 762 aa10.21□□□□□ -0.77
TRIM59-203ENST00000471155 NUBP1P53384 320 aa10.2□□□□□ -0.78
TRIM59-203ENST00000471155 DCAF8L2P0C7V8 631 aa10.19□□□□□ -0.78
TRIM59-203ENST00000471155 DCAF8Q5TAQ9 597 aa10.14□□□□□ -0.79
TRIM59-203ENST00000471155 CHRDL2Q6WN34 429 aa10.14□□□□□ -0.79
TRIM59-203ENST00000471155 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRIM59-203ENST00000471155 PRKAR2AP13861 404 aaKnown RBP10.13□□□□□ -0.79
TRIM59-203ENST00000471155 FXR2P51116 673 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRIM59-203ENST00000471155 GSE1Q14687 1217 aa10.13□□□□□ -0.79
TRIM59-203ENST00000471155 RGL2O15211 777 aa10.12□□□□□ -0.79
TRIM59-203ENST00000471155 RASEFQ8IZ41 740 aa10.12□□□□□ -0.79
TRIM59-203ENST00000471155 FAM212AQ96EL1 285 aa10.1□□□□□ -0.79
TRIM59-203ENST00000471155 FARP1Q9Y4F1 1045 aaPredicted RBP10.1□□□□□ -0.79
TRIM59-203ENST00000471155 PIP4P2Q8N4L2 257 aa10.08□□□□□ -0.8
TRIM59-203ENST00000471155 TRIM41Q8WV44 630 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms