RNA–Protein interactions for RNA: ENST00000470903.5

NVL-213, Transcript of nuclear VCP-like, humanhuman

TSL 3

Gene NVL, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-213ENST00000470903 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
NVL-213ENST00000470903 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
NVL-213ENST00000470903 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
NVL-213ENST00000470903 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
NVL-213ENST00000470903 FOXD1Q16676 465 aa20.43■□□□□ 0.86
NVL-213ENST00000470903 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
NVL-213ENST00000470903 MSH5O43196 834 aa19.2■□□□□ 0.66
NVL-213ENST00000470903 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
NVL-213ENST00000470903 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
NVL-213ENST00000470903 ADRA2BP18089 450 aa19■□□□□ 0.63
NVL-213ENST00000470903 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
NVL-213ENST00000470903 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
NVL-213ENST00000470903 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
NVL-213ENST00000470903 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
NVL-213ENST00000470903 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
NVL-213ENST00000470903 CNKSR2Q8WXI2 1034 aa16.77■□□□□ 0.28
NVL-213ENST00000470903 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
NVL-213ENST00000470903 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
NVL-213ENST00000470903 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
NVL-213ENST00000470903 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
NVL-213ENST00000470903 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
NVL-213ENST00000470903 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
NVL-213ENST00000470903 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
NVL-213ENST00000470903 C1QBPQ07021 282 aaKnown RBP16.15■□□□□ 0.18
NVL-213ENST00000470903 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
NVL-213ENST00000470903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
NVL-213ENST00000470903 KCNA4P22459 653 aa15.78■□□□□ 0.12
NVL-213ENST00000470903 U3KPZ7 1027 aaPredicted RBP15.59■□□□□ 0.09
NVL-213ENST00000470903 SLC4A2P04920 1241 aa15.41■□□□□ 0.06
NVL-213ENST00000470903 CAPN15O75808 1086 aa15.38■□□□□ 0.05
NVL-213ENST00000470903 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
NVL-213ENST00000470903 DSG3P32926 999 aa15.29■□□□□ 0.04
NVL-213ENST00000470903 APLP2Q06481 763 aa15.26■□□□□ 0.03
NVL-213ENST00000470903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
NVL-213ENST00000470903 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
NVL-213ENST00000470903 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
NVL-213ENST00000470903 TRHP20396 242 aaPredicted RBP15.12■□□□□ 0.01
NVL-213ENST00000470903 SAMD1Q6SPF0 538 aaPredicted RBP15.12■□□□□ 0.01
NVL-213ENST00000470903 ABCB7O75027 752 aa14.98□□□□□ -0.01
NVL-213ENST00000470903 MYCNP04198 464 aaPredicted RBP14.96□□□□□ -0.01
NVL-213ENST00000470903 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
NVL-213ENST00000470903 FOXD4L1Q9NU39 408 aa14.79□□□□□ -0.04
NVL-213ENST00000470903 POLA2Q14181 598 aa14.7□□□□□ -0.06
NVL-213ENST00000470903 POTEHQ6S545 545 aa14.7□□□□□ -0.06
NVL-213ENST00000470903 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
NVL-213ENST00000470903 ATF5Q9Y2D1 282 aaPredicted RBP14.55□□□□□ -0.08
NVL-213ENST00000470903 ZBTB22O15209 634 aa14.47□□□□□ -0.09
NVL-213ENST00000470903 ZBTB12Q9Y330 459 aaPredicted RBP14.46□□□□□ -0.09
NVL-213ENST00000470903 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
NVL-213ENST00000470903 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
NVL-213ENST00000470903 AKT1S1Q96B36 256 aa14.29□□□□□ -0.12
NVL-213ENST00000470903 OSCARQ8IYS5 282 aa14.21□□□□□ -0.13
NVL-213ENST00000470903 REM2Q8IYK8 340 aaPredicted RBP14.12□□□□□ -0.15
NVL-213ENST00000470903 FBLN2P98095 1184 aa14.08□□□□□ -0.16
NVL-213ENST00000470903 SPDYE2BA6NHP3 402 aa13.99□□□□□ -0.17
NVL-213ENST00000470903 SPDYE6P0CI01 402 aa13.99□□□□□ -0.17
NVL-213ENST00000470903 SPDYE2Q495Y8 402 aa13.99□□□□□ -0.17
NVL-213ENST00000470903 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
NVL-213ENST00000470903 PIP4P2Q8N4L2 257 aa13.93□□□□□ -0.18
NVL-213ENST00000470903 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
NVL-213ENST00000470903 FXR2P51116 673 aaKnown RBP eCLIP13.87□□□□□ -0.19
NVL-213ENST00000470903 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
NVL-213ENST00000470903 ZNF692Q9BU19 519 aaPredicted RBP13.81□□□□□ -0.2
NVL-213ENST00000470903 SP7Q8TDD2 431 aaPredicted RBP13.77□□□□□ -0.21
NVL-213ENST00000470903 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
NVL-213ENST00000470903 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
NVL-213ENST00000470903 HAX1O00165 279 aa13.71□□□□□ -0.21
NVL-213ENST00000470903 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
NVL-213ENST00000470903 PRKAR2AP13861 404 aaKnown RBP13.61□□□□□ -0.23
NVL-213ENST00000470903 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
NVL-213ENST00000470903 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
NVL-213ENST00000470903 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
NVL-213ENST00000470903 EVX2Q03828 476 aa13.48□□□□□ -0.25
NVL-213ENST00000470903 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
NVL-213ENST00000470903 CHADLQ6NUI6 762 aa13.42□□□□□ -0.26
NVL-213ENST00000470903 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
NVL-213ENST00000470903 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
NVL-213ENST00000470903 FARP1Q9Y4F1 1045 aaPredicted RBP13.25□□□□□ -0.29
NVL-213ENST00000470903 GABBR2O75899 941 aa13.22□□□□□ -0.29
NVL-213ENST00000470903 CD44P16070 742 aaKnown RBP13.18□□□□□ -0.3
NVL-213ENST00000470903 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
NVL-213ENST00000470903 CLCN6P51797 869 aa13.1□□□□□ -0.31
NVL-213ENST00000470903 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
NVL-213ENST00000470903 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
NVL-213ENST00000470903 NPM1P06748 294 aaKnown RBP eCLIP12.94□□□□□ -0.34
NVL-213ENST00000470903 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
NVL-213ENST00000470903 LHX8Q68G74 356 aa12.92□□□□□ -0.34
NVL-213ENST00000470903 PROM2Q8N271 834 aa12.92□□□□□ -0.34
NVL-213ENST00000470903 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
NVL-213ENST00000470903 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
NVL-213ENST00000470903 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
NVL-213ENST00000470903 GALR2O43603 387 aaPredicted RBP12.79□□□□□ -0.36
NVL-213ENST00000470903 PHF12Q96QT6 1004 aa12.77□□□□□ -0.37
NVL-213ENST00000470903 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
NVL-213ENST00000470903 MIER1Q8N108 512 aa12.67□□□□□ -0.38
NVL-213ENST00000470903 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
NVL-213ENST00000470903 MS4A3Q96HJ5 214 aa12.61□□□□□ -0.39
NVL-213ENST00000470903 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
NVL-213ENST00000470903 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
NVL-213ENST00000470903 FKBP8Q14318 412 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms