RNA–Protein interactions for RNA: ENST00000470801.1

PPP4R3B-201, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 4

Gene PPP4R3B, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-201ENST00000470801 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
PPP4R3B-201ENST00000470801 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
PPP4R3B-201ENST00000470801 SENP3Q9H4L4 574 aaPredicted RBP19.08■□□□□ 0.64
PPP4R3B-201ENST00000470801 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
PPP4R3B-201ENST00000470801 FOXD1Q16676 465 aa17.86■□□□□ 0.45
PPP4R3B-201ENST00000470801 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
PPP4R3B-201ENST00000470801 MSH5O43196 834 aa16.7■□□□□ 0.26
PPP4R3B-201ENST00000470801 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
PPP4R3B-201ENST00000470801 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
PPP4R3B-201ENST00000470801 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
PPP4R3B-201ENST00000470801 ADRA2BP18089 450 aa16.54■□□□□ 0.24
PPP4R3B-201ENST00000470801 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3B-201ENST00000470801 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
PPP4R3B-201ENST00000470801 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
PPP4R3B-201ENST00000470801 PPP4R3CPQ6ZMV5 832 aa14.71□□□□□ -0.05
PPP4R3B-201ENST00000470801 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
PPP4R3B-201ENST00000470801 HOXD11P31277 338 aaPredicted RBP14.51□□□□□ -0.09
PPP4R3B-201ENST00000470801 CACNB1Q02641 598 aaPredicted RBP14.46□□□□□ -0.09
PPP4R3B-201ENST00000470801 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
PPP4R3B-201ENST00000470801 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
PPP4R3B-201ENST00000470801 RNF39Q9H2S5 420 aa14.27□□□□□ -0.13
PPP4R3B-201ENST00000470801 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
PPP4R3B-201ENST00000470801 C1QBPQ07021 282 aaKnown RBP14.02□□□□□ -0.17
PPP4R3B-201ENST00000470801 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
PPP4R3B-201ENST00000470801 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
PPP4R3B-201ENST00000470801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.27e-17■■■□□ 15.8
PPP4R3B-201ENST00000470801 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3B-201ENST00000470801 KCNA4P22459 653 aa13.52□□□□□ -0.25
PPP4R3B-201ENST00000470801 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3B-201ENST00000470801 CAPN15O75808 1086 aa13.36□□□□□ -0.27
PPP4R3B-201ENST00000470801 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
PPP4R3B-201ENST00000470801 DSG3P32926 999 aa13.33□□□□□ -0.28
PPP4R3B-201ENST00000470801 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3B-201ENST00000470801 ABCB7O75027 752 aa13.06□□□□□ -0.32
PPP4R3B-201ENST00000470801 APLP2Q06481 763 aa13.05□□□□□ -0.32
PPP4R3B-201ENST00000470801 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
PPP4R3B-201ENST00000470801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
PPP4R3B-201ENST00000470801 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
PPP4R3B-201ENST00000470801 POTEHQ6S545 545 aa12.98□□□□□ -0.33
PPP4R3B-201ENST00000470801 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
PPP4R3B-201ENST00000470801 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
PPP4R3B-201ENST00000470801 POLA2Q14181 598 aa12.73□□□□□ -0.37
PPP4R3B-201ENST00000470801 SLC4A1APQ9BWU0 796 aaKnown RBP12.7□□□□□ -0.38
PPP4R3B-201ENST00000470801 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
PPP4R3B-201ENST00000470801 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
PPP4R3B-201ENST00000470801 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
PPP4R3B-201ENST00000470801 CHRDL2Q6WN34 429 aa12.49□□□□□ -0.41
PPP4R3B-201ENST00000470801 ZBTB22O15209 634 aa12.44□□□□□ -0.42
PPP4R3B-201ENST00000470801 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
PPP4R3B-201ENST00000470801 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
PPP4R3B-201ENST00000470801 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
PPP4R3B-201ENST00000470801 OSCARQ8IYS5 282 aa12.34□□□□□ -0.43
PPP4R3B-201ENST00000470801 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
PPP4R3B-201ENST00000470801 CSRNP3Q8WYN3 585 aa12.27□□□□□ -0.45
PPP4R3B-201ENST00000470801 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
PPP4R3B-201ENST00000470801 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
PPP4R3B-201ENST00000470801 PITPNM1O00562 1244 aa12.16□□□□□ -0.46
PPP4R3B-201ENST00000470801 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
PPP4R3B-201ENST00000470801 FXR2P51116 673 aaKnown RBP eCLIP12.07□□□□□ -0.48
PPP4R3B-201ENST00000470801 FBLN2P98095 1184 aa12.05□□□□□ -0.48
PPP4R3B-201ENST00000470801 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
PPP4R3B-201ENST00000470801 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
PPP4R3B-201ENST00000470801 SPDYE2Q495Y8 402 aa12.03□□□□□ -0.48
PPP4R3B-201ENST00000470801 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
PPP4R3B-201ENST00000470801 HAX1O00165 279 aa11.99□□□□□ -0.49
PPP4R3B-201ENST00000470801 EVX2Q03828 476 aa11.89□□□□□ -0.51
PPP4R3B-201ENST00000470801 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
PPP4R3B-201ENST00000470801 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
PPP4R3B-201ENST00000470801 SSUH2Q9Y2M2 353 aa11.87□□□□□ -0.51
PPP4R3B-201ENST00000470801 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
PPP4R3B-201ENST00000470801 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
PPP4R3B-201ENST00000470801 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
PPP4R3B-201ENST00000470801 CHADLQ6NUI6 762 aa11.7□□□□□ -0.54
PPP4R3B-201ENST00000470801 C19orf67A6NJJ6 358 aa11.69□□□□□ -0.54
PPP4R3B-201ENST00000470801 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
PPP4R3B-201ENST00000470801 GABBR2O75899 941 aa11.57□□□□□ -0.56
PPP4R3B-201ENST00000470801 FARP1Q9Y4F1 1045 aaPredicted RBP11.47□□□□□ -0.57
PPP4R3B-201ENST00000470801 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
PPP4R3B-201ENST00000470801 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
PPP4R3B-201ENST00000470801 LHX8Q68G74 356 aa11.35□□□□□ -0.59
PPP4R3B-201ENST00000470801 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
PPP4R3B-201ENST00000470801 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
PPP4R3B-201ENST00000470801 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
PPP4R3B-201ENST00000470801 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
PPP4R3B-201ENST00000470801 ZNF579Q8NAF0 562 aaKnown RBP11.25□□□□□ -0.61
PPP4R3B-201ENST00000470801 CLCN6P51797 869 aa11.24□□□□□ -0.61
PPP4R3B-201ENST00000470801 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
PPP4R3B-201ENST00000470801 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
PPP4R3B-201ENST00000470801 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
PPP4R3B-201ENST00000470801 PHF12Q96QT6 1004 aa11.12□□□□□ -0.63
PPP4R3B-201ENST00000470801 PAK3O75914 559 aaPredicted RBP11.08□□□□□ -0.64
PPP4R3B-201ENST00000470801 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
PPP4R3B-201ENST00000470801 FKBP8Q14318 412 aa11.06□□□□□ -0.64
PPP4R3B-201ENST00000470801 PROM2Q8N271 834 aa11.03□□□□□ -0.64
PPP4R3B-201ENST00000470801 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
PPP4R3B-201ENST00000470801 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
PPP4R3B-201ENST00000470801 MS4A3Q96HJ5 214 aa10.95□□□□□ -0.66
PPP4R3B-201ENST00000470801 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
PPP4R3B-201ENST00000470801 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
PPP4R3B-201ENST00000470801 ATMINO43313 823 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms