RNA–Protein interactions for RNA: ENST00000470540.5

C1orf198-203, Transcript of chromosome 1 open reading frame 198, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C1orf198, Length 3,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf198-203ENST00000470540 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
C1orf198-203ENST00000470540 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
C1orf198-203ENST00000470540 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
C1orf198-203ENST00000470540 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
C1orf198-203ENST00000470540 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
C1orf198-203ENST00000470540 SUPT5HO00267 1087 aaKnown RBP22.38■■□□□ 1.17
C1orf198-203ENST00000470540 DCAF1Q9Y4B6 1507 aa21.57■■□□□ 1.04
C1orf198-203ENST00000470540 ABCC9O60706 1549 aa21.51■■□□□ 1.03
C1orf198-203ENST00000470540 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
C1orf198-203ENST00000470540 MYO15BQ96JP2 1530 aa21.42■■□□□ 1.02
C1orf198-203ENST00000470540 SCRIBQ14160 1630 aa21.41■■□□□ 1.02
C1orf198-203ENST00000470540 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
C1orf198-203ENST00000470540 LOC105371045A0A1W2PR82 267 aa21.06■□□□□ 0.96
C1orf198-203ENST00000470540 CECR2Q9BXF3 1484 aa21■□□□□ 0.95
C1orf198-203ENST00000470540 NACADO15069 1562 aa20.91■□□□□ 0.94
C1orf198-203ENST00000470540 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
C1orf198-203ENST00000470540 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
C1orf198-203ENST00000470540 EHMT2Q96KQ7 1210 aa20.81■□□□□ 0.92
C1orf198-203ENST00000470540 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.92
C1orf198-203ENST00000470540 PCGF6Q9BYE7 350 aa20.7■□□□□ 0.9
C1orf198-203ENST00000470540 WIZO95785 1651 aa20.69■□□□□ 0.9
C1orf198-203ENST00000470540 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
C1orf198-203ENST00000470540 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
C1orf198-203ENST00000470540 UNC13AQ9UPW8 1703 aa20.51■□□□□ 0.87
C1orf198-203ENST00000470540 BAZ1AQ9NRL2 1556 aaPredicted RBP20.36■□□□□ 0.85
C1orf198-203ENST00000470540 HRCP23327 699 aa20.31■□□□□ 0.84
C1orf198-203ENST00000470540 PPARGC1BQ86YN6 1023 aaKnown RBP20.31■□□□□ 0.84
C1orf198-203ENST00000470540 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
C1orf198-203ENST00000470540 BICRAQ9NZM4 1560 aa20.28■□□□□ 0.84
C1orf198-203ENST00000470540 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
C1orf198-203ENST00000470540 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
C1orf198-203ENST00000470540 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
C1orf198-203ENST00000470540 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
C1orf198-203ENST00000470540 EIF4G1Q04637 1599 aaKnown RBP20.13■□□□□ 0.81
C1orf198-203ENST00000470540 TRIM26Q12899 539 aaPredicted RBP20.1■□□□□ 0.81
C1orf198-203ENST00000470540 TTBK1Q5TCY1 1321 aaPredicted RBP20.01■□□□□ 0.79
C1orf198-203ENST00000470540 SOGA1O94964 1423 aa20.01■□□□□ 0.79
C1orf198-203ENST00000470540 RUSC2Q8N2Y8 1516 aa19.98■□□□□ 0.79
C1orf198-203ENST00000470540 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.77
C1orf198-203ENST00000470540 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
C1orf198-203ENST00000470540 UBTFP17480 764 aaKnown RBP19.78■□□□□ 0.76
C1orf198-203ENST00000470540 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
C1orf198-203ENST00000470540 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
C1orf198-203ENST00000470540 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
C1orf198-203ENST00000470540 RANGAP1P46060 587 aaPredicted RBP19.75■□□□□ 0.75
C1orf198-203ENST00000470540 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
C1orf198-203ENST00000470540 CEP162Q5TB80 1403 aa19.67■□□□□ 0.74
C1orf198-203ENST00000470540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.64■□□□□ 0.73
C1orf198-203ENST00000470540 TNIKQ9UKE5 1360 aa19.54■□□□□ 0.72
C1orf198-203ENST00000470540 RAPGEF2Q9Y4G8 1499 aa19.46■□□□□ 0.71
C1orf198-203ENST00000470540 GOLGA3Q08378 1498 aa19.46■□□□□ 0.71
C1orf198-203ENST00000470540 NCAPD3P42695 1498 aa19.45■□□□□ 0.7
C1orf198-203ENST00000470540 EEA1Q15075 1411 aa19.44■□□□□ 0.7
C1orf198-203ENST00000470540 CCER1Q8TC90 406 aaPredicted RBP19.4■□□□□ 0.7
C1orf198-203ENST00000470540 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
C1orf198-203ENST00000470540 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
C1orf198-203ENST00000470540 CUX1P39880 1505 aa19.34■□□□□ 0.69
C1orf198-203ENST00000470540 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
C1orf198-203ENST00000470540 CLIP1P30622 1438 aa19.34■□□□□ 0.69
C1orf198-203ENST00000470540 ZEB1P37275 1124 aaPredicted RBP19.32■□□□□ 0.68
C1orf198-203ENST00000470540 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
C1orf198-203ENST00000470540 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
C1orf198-203ENST00000470540 CFTRP13569 1480 aa19.27■□□□□ 0.68
C1orf198-203ENST00000470540 KIF21BO75037 1637 aa19.26■□□□□ 0.67
C1orf198-203ENST00000470540 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
C1orf198-203ENST00000470540 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
C1orf198-203ENST00000470540 VPS8Q8N3P4 1428 aa19.15■□□□□ 0.66
C1orf198-203ENST00000470540 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
C1orf198-203ENST00000470540 PRXQ9BXM0 1461 aa19.15■□□□□ 0.66
C1orf198-203ENST00000470540 KANK4Q5T7N3 995 aaPredicted RBP19.14■□□□□ 0.66
C1orf198-203ENST00000470540 NESP48681 1621 aa19.14■□□□□ 0.65
C1orf198-203ENST00000470540 APLP2Q06481 763 aa19.12■□□□□ 0.65
C1orf198-203ENST00000470540 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
C1orf198-203ENST00000470540 CUX2O14529 1486 aa19.09■□□□□ 0.65
C1orf198-203ENST00000470540 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
C1orf198-203ENST00000470540 P3H3Q8IVL6 736 aa19.04■□□□□ 0.64
C1orf198-203ENST00000470540 IGF1RP08069 1367 aa19.04■□□□□ 0.64
C1orf198-203ENST00000470540 FGD5Q6ZNL6 1462 aa19.04■□□□□ 0.64
C1orf198-203ENST00000470540 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
C1orf198-203ENST00000470540 RAD54L2Q9Y4B4 1467 aa19.01■□□□□ 0.63
C1orf198-203ENST00000470540 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
C1orf198-203ENST00000470540 ERICH3Q5RHP9 1530 aa18.97■□□□□ 0.63
C1orf198-203ENST00000470540 ITGAEP38570 1179 aa18.96■□□□□ 0.63
C1orf198-203ENST00000470540 ARHGAP35Q9NRY4 1499 aa18.95■□□□□ 0.62
C1orf198-203ENST00000470540 CARMIL1Q5VZK9 1371 aa18.93■□□□□ 0.62
C1orf198-203ENST00000470540 ATP1B4Q9UN42 357 aaPredicted RBP18.91■□□□□ 0.62
C1orf198-203ENST00000470540 PRDM2Q13029 1718 aa18.9■□□□□ 0.62
C1orf198-203ENST00000470540 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
C1orf198-203ENST00000470540 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
C1orf198-203ENST00000470540 TOPBP1Q92547 1522 aa18.83■□□□□ 0.6
C1orf198-203ENST00000470540 TDRD9Q8NDG6 1382 aaKnown RBP18.82■□□□□ 0.6
C1orf198-203ENST00000470540 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
C1orf198-203ENST00000470540 PELP1Q8IZL8 1130 aaKnown RBP18.75■□□□□ 0.59
C1orf198-203ENST00000470540 FHOD3Q2V2M9 1422 aa18.74■□□□□ 0.59
C1orf198-203ENST00000470540 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
C1orf198-203ENST00000470540 ZNF316A6NFI3 1004 aaPredicted RBP18.71■□□□□ 0.59
C1orf198-203ENST00000470540 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
C1orf198-203ENST00000470540 DHX57Q6P158 1386 aaKnown RBP18.67■□□□□ 0.58
C1orf198-203ENST00000470540 CCNB3Q8WWL7 1395 aa18.66■□□□□ 0.58
C1orf198-203ENST00000470540 PHLDB1Q86UU1 1377 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms