RNA–Protein interactions for RNA: ENST00000470472.5

SFPQ-206, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 5

Gene SFPQ, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-206ENST00000470472 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
SFPQ-206ENST00000470472 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
SFPQ-206ENST00000470472 SENP3Q9H4L4 574 aaPredicted RBP15.63■□□□□ 0.09
SFPQ-206ENST00000470472 POTEDQ86YR6 584 aa15.58■□□□□ 0.08
SFPQ-206ENST00000470472 PHF23Q9BUL5 403 aaPredicted RBP15.32■□□□□ 0.04
SFPQ-206ENST00000470472 FOXD1Q16676 465 aa14.74□□□□□ -0.05
SFPQ-206ENST00000470472 MSH5O43196 834 aa14.14□□□□□ -0.15
SFPQ-206ENST00000470472 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
SFPQ-206ENST00000470472 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
SFPQ-206ENST00000470472 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
SFPQ-206ENST00000470472 ADRA2BP18089 450 aa12.89□□□□□ -0.35
SFPQ-206ENST00000470472 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
SFPQ-206ENST00000470472 DMRT2Q9Y5R5 561 aa12.26□□□□□ -0.45
SFPQ-206ENST00000470472 MAPK8IP2Q13387 824 aaPredicted RBP12.17□□□□□ -0.46
SFPQ-206ENST00000470472 RNF39Q9H2S5 420 aa12□□□□□ -0.49
SFPQ-206ENST00000470472 POTEHQ6S545 545 aa11.99□□□□□ -0.49
SFPQ-206ENST00000470472 PPP4R3CPQ6ZMV5 832 aa11.85□□□□□ -0.51
SFPQ-206ENST00000470472 SCAF1Q9H7N4 1312 aaKnown RBP11.78□□□□□ -0.52
SFPQ-206ENST00000470472 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
SFPQ-206ENST00000470472 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
SFPQ-206ENST00000470472 KCNA4P22459 653 aa11.62□□□□□ -0.55
SFPQ-206ENST00000470472 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
SFPQ-206ENST00000470472 CNKSR2Q8WXI2 1034 aa11.54□□□□□ -0.56
SFPQ-206ENST00000470472 HOXD11P31277 338 aaPredicted RBP11.42□□□□□ -0.58
SFPQ-206ENST00000470472 NPM3O75607 178 aaKnown RBP11.38□□□□□ -0.59
SFPQ-206ENST00000470472 RNF216Q9NWF9 866 aaPredicted RBP11.3□□□□□ -0.6
SFPQ-206ENST00000470472 DNAJC5BQ9UF47 199 aa11.22□□□□□ -0.61
SFPQ-206ENST00000470472 SLC4A1APQ9BWU0 796 aaKnown RBP11.1□□□□□ -0.63
SFPQ-206ENST00000470472 DSG3P32926 999 aa10.9□□□□□ -0.66
SFPQ-206ENST00000470472 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.83□□□□□ -0.688e-8■■■■■ 32
SFPQ-206ENST00000470472 EHMT2Q96KQ7 1210 aa10.79□□□□□ -0.68
SFPQ-206ENST00000470472 SP7Q8TDD2 431 aaPredicted RBP10.76□□□□□ -0.69
SFPQ-206ENST00000470472 SLC4A2P04920 1241 aa10.73□□□□□ -0.69
SFPQ-206ENST00000470472 CSRNP3Q8WYN3 585 aa10.71□□□□□ -0.69
SFPQ-206ENST00000470472 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
SFPQ-206ENST00000470472 SPINK5Q9NQ38 1064 aaPredicted RBP10.69□□□□□ -0.7
SFPQ-206ENST00000470472 ZBTB22O15209 634 aa10.68□□□□□ -0.7
SFPQ-206ENST00000470472 CAPN15O75808 1086 aa10.68□□□□□ -0.7
SFPQ-206ENST00000470472 CHRDL2Q6WN34 429 aa10.58□□□□□ -0.72
SFPQ-206ENST00000470472 MYCNP04198 464 aaPredicted RBP10.54□□□□□ -0.72
SFPQ-206ENST00000470472 U3KPZ7 1027 aaPredicted RBP10.54□□□□□ -0.72
SFPQ-206ENST00000470472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
SFPQ-206ENST00000470472 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
SFPQ-206ENST00000470472 SAMD1Q6SPF0 538 aaPredicted RBP10.41□□□□□ -0.74
SFPQ-206ENST00000470472 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.74
SFPQ-206ENST00000470472 RBM42Q9BTD8 480 aaKnown RBP10.37□□□□□ -0.75
SFPQ-206ENST00000470472 ABCB7O75027 752 aa10.36□□□□□ -0.75
SFPQ-206ENST00000470472 APLP2Q06481 763 aa10.34□□□□□ -0.75
SFPQ-206ENST00000470472 TRHP20396 242 aaPredicted RBP10.27□□□□□ -0.77
SFPQ-206ENST00000470472 PLSCR2Q9NRY7 297 aa10.27□□□□□ -0.77
SFPQ-206ENST00000470472 ATF5Q9Y2D1 282 aaPredicted RBP10.2□□□□□ -0.78
SFPQ-206ENST00000470472 HAX1O00165 279 aa10.19□□□□□ -0.78
SFPQ-206ENST00000470472 ZNF219Q9P2Y4 722 aaPredicted RBP10.19□□□□□ -0.78
SFPQ-206ENST00000470472 PIP4P2Q8N4L2 257 aa10.13□□□□□ -0.79
SFPQ-206ENST00000470472 LHX8Q68G74 356 aa10.08□□□□□ -0.8
SFPQ-206ENST00000470472 EVX2Q03828 476 aa10.06□□□□□ -0.8
SFPQ-206ENST00000470472 POLA2Q14181 598 aa9.98□□□□□ -0.81
SFPQ-206ENST00000470472 AKT1S1Q96B36 256 aa9.94□□□□□ -0.82
SFPQ-206ENST00000470472 FXR2P51116 673 aaKnown RBP eCLIP9.91□□□□□ -0.821e-9■■■□□ 19
SFPQ-206ENST00000470472 REM2Q8IYK8 340 aaPredicted RBP9.87□□□□□ -0.83
SFPQ-206ENST00000470472 ZBTB12Q9Y330 459 aaPredicted RBP9.87□□□□□ -0.83
SFPQ-206ENST00000470472 FBLN2P98095 1184 aa9.83□□□□□ -0.84
SFPQ-206ENST00000470472 PITPNM1O00562 1244 aa9.78□□□□□ -0.84
SFPQ-206ENST00000470472 MKRN4PQ13434 485 aaPredicted RBP9.78□□□□□ -0.84
SFPQ-206ENST00000470472 GABBR2O75899 941 aa9.74□□□□□ -0.85
SFPQ-206ENST00000470472 FKBP8Q14318 412 aa9.65□□□□□ -0.86
SFPQ-206ENST00000470472 C19orf67A6NJJ6 358 aa9.62□□□□□ -0.87
SFPQ-206ENST00000470472 SPDYE4A6NLX3 237 aa9.61□□□□□ -0.87
SFPQ-206ENST00000470472 SPDYE2BA6NHP3 402 aa9.59□□□□□ -0.87
SFPQ-206ENST00000470472 SPDYE6P0CI01 402 aa9.59□□□□□ -0.87
SFPQ-206ENST00000470472 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
SFPQ-206ENST00000470472 OSCARQ8IYS5 282 aa9.58□□□□□ -0.88
SFPQ-206ENST00000470472 POTEIP0CG38 1075 aa9.56□□□□□ -0.88
SFPQ-206ENST00000470472 POTEMA6NI47 508 aa9.54□□□□□ -0.88
SFPQ-206ENST00000470472 ZNF692Q9BU19 519 aaPredicted RBP9.54□□□□□ -0.88
SFPQ-206ENST00000470472 SSUH2Q9Y2M2 353 aa9.51□□□□□ -0.89
SFPQ-206ENST00000470472 PRKAR2AP13861 404 aaKnown RBP9.5□□□□□ -0.89
SFPQ-206ENST00000470472 PROM2Q8N271 834 aa9.5□□□□□ -0.89
SFPQ-206ENST00000470472 POTEGQ6S5H5 508 aa9.47□□□□□ -0.89
SFPQ-206ENST00000470472 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
SFPQ-206ENST00000470472 PABPN1Q86U42 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
SFPQ-206ENST00000470472 OTUD5Q96G74 571 aa9.38□□□□□ -0.91
SFPQ-206ENST00000470472 FBXO3Q9UK99 471 aa9.38□□□□□ -0.91
SFPQ-206ENST00000470472 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
SFPQ-206ENST00000470472 SPDYE1Q8NFV5 336 aaPredicted RBP9.28□□□□□ -0.92
SFPQ-206ENST00000470472 CLEC11AQ9Y240 323 aa9.23□□□□□ -0.93
SFPQ-206ENST00000470472 POTEB2H3BUK9 544 aa9.22□□□□□ -0.93
SFPQ-206ENST00000470472 DCBLD2Q96PD2 775 aa9.21□□□□□ -0.94
SFPQ-206ENST00000470472 CHADLQ6NUI6 762 aa9.2□□□□□ -0.94
SFPQ-206ENST00000470472 VASPP50552 380 aaPredicted RBP9.19□□□□□ -0.94
SFPQ-206ENST00000470472 CLCN6P51797 869 aa9.18□□□□□ -0.94
SFPQ-206ENST00000470472 PRR29P0C7W0 189 aa9.15□□□□□ -0.94
SFPQ-206ENST00000470472 NISCHQ9Y2I1 1504 aa9.14□□□□□ -0.95
SFPQ-206ENST00000470472 CD44P16070 742 aaKnown RBP9.13□□□□□ -0.95
SFPQ-206ENST00000470472 MIER1Q8N108 512 aa9.12□□□□□ -0.95
SFPQ-206ENST00000470472 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
SFPQ-206ENST00000470472 PLEKHG5O94827 1062 aa9.1□□□□□ -0.95
SFPQ-206ENST00000470472 PLCD3Q8N3E9 789 aa9.1□□□□□ -0.95
SFPQ-206ENST00000470472 IFNLR1Q8IU57 520 aaPredicted RBP9.06□□□□□ -0.96
SFPQ-206ENST00000470472 ZBTB47Q9UFB7 747 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms