RNA–Protein interactions for RNA: ENST00000470404.5

PTP4A2-203, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3 BASIC

Gene PTP4A2, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-203ENST00000470404 AEBP2Q6ZN18 517 aaPredicted RBP16.38■□□□□ 0.21
PTP4A2-203ENST00000470404 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
PTP4A2-203ENST00000470404 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
PTP4A2-203ENST00000470404 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
PTP4A2-203ENST00000470404 FOXD1Q16676 465 aa13□□□□□ -0.33
PTP4A2-203ENST00000470404 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
PTP4A2-203ENST00000470404 PPP6R1Q9UPN7 881 aa12.17□□□□□ -0.46
PTP4A2-203ENST00000470404 MSH5O43196 834 aa12.12□□□□□ -0.47
PTP4A2-203ENST00000470404 PIAS4Q8N2W9 510 aaPredicted RBP12.1□□□□□ -0.47
PTP4A2-203ENST00000470404 ADRA2BP18089 450 aa12.09□□□□□ -0.47
PTP4A2-203ENST00000470404 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
PTP4A2-203ENST00000470404 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
PTP4A2-203ENST00000470404 DMRT2Q9Y5R5 561 aa11.04□□□□□ -0.64
PTP4A2-203ENST00000470404 SCAF1Q9H7N4 1312 aaKnown RBP10.98□□□□□ -0.65
PTP4A2-203ENST00000470404 PPP4R3CPQ6ZMV5 832 aa10.82□□□□□ -0.68
PTP4A2-203ENST00000470404 HOXD11P31277 338 aaPredicted RBP10.64□□□□□ -0.71
PTP4A2-203ENST00000470404 CNKSR2Q8WXI2 1034 aa10.61□□□□□ -0.71
PTP4A2-203ENST00000470404 RNF216Q9NWF9 866 aaPredicted RBP10.53□□□□□ -0.72
PTP4A2-203ENST00000470404 DCAF8L1A6NGE4 600 aa10.52□□□□□ -0.73
PTP4A2-203ENST00000470404 CACNB1Q02641 598 aaPredicted RBP10.42□□□□□ -0.74
PTP4A2-203ENST00000470404 RNF39Q9H2S5 420 aa10.39□□□□□ -0.75
PTP4A2-203ENST00000470404 NCBP3Q53F19 620 aaKnown RBP10.33□□□□□ -0.76
PTP4A2-203ENST00000470404 DNAJC5BQ9UF47 199 aa10.26□□□□□ -0.77
PTP4A2-203ENST00000470404 NPM3O75607 178 aaKnown RBP10.25□□□□□ -0.77
PTP4A2-203ENST00000470404 C1QBPQ07021 282 aaKnown RBP10.19□□□□□ -0.78
PTP4A2-203ENST00000470404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.07□□□□□ -0.8
PTP4A2-203ENST00000470404 KCNA4P22459 653 aa10.03□□□□□ -0.8
PTP4A2-203ENST00000470404 U3KPZ7 1027 aaPredicted RBP9.91□□□□□ -0.82
PTP4A2-203ENST00000470404 SLC4A2P04920 1241 aa9.83□□□□□ -0.84
PTP4A2-203ENST00000470404 SPINK5Q9NQ38 1064 aaPredicted RBP9.78□□□□□ -0.84
PTP4A2-203ENST00000470404 DSG3P32926 999 aa9.71□□□□□ -0.86
PTP4A2-203ENST00000470404 CAPN15O75808 1086 aa9.7□□□□□ -0.86
PTP4A2-203ENST00000470404 TRHP20396 242 aaPredicted RBP9.55□□□□□ -0.88
PTP4A2-203ENST00000470404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.54□□□□□ -0.88
PTP4A2-203ENST00000470404 HNRNPUL2Q1KMD3 747 aaKnown RBP9.54□□□□□ -0.88
PTP4A2-203ENST00000470404 APLP2Q06481 763 aa9.53□□□□□ -0.88
PTP4A2-203ENST00000470404 ZNF219Q9P2Y4 722 aaPredicted RBP9.52□□□□□ -0.89
PTP4A2-203ENST00000470404 ABCB7O75027 752 aa9.51□□□□□ -0.89
PTP4A2-203ENST00000470404 SAMD1Q6SPF0 538 aaPredicted RBP9.5□□□□□ -0.89
PTP4A2-203ENST00000470404 MYCNP04198 464 aaPredicted RBP9.45□□□□□ -0.9
PTP4A2-203ENST00000470404 SLC4A1APQ9BWU0 796 aaKnown RBP9.43□□□□□ -0.9
PTP4A2-203ENST00000470404 POTEHQ6S545 545 aa9.33□□□□□ -0.92
PTP4A2-203ENST00000470404 FOXD4L1Q9NU39 408 aa9.33□□□□□ -0.92
PTP4A2-203ENST00000470404 POLA2Q14181 598 aa9.31□□□□□ -0.92
PTP4A2-203ENST00000470404 ATF5Q9Y2D1 282 aaPredicted RBP9.3□□□□□ -0.92
PTP4A2-203ENST00000470404 ZBTB22O15209 634 aa9.26□□□□□ -0.93
PTP4A2-203ENST00000470404 RBM42Q9BTD8 480 aaKnown RBP9.2□□□□□ -0.94
PTP4A2-203ENST00000470404 ZBTB12Q9Y330 459 aaPredicted RBP9.07□□□□□ -0.96
PTP4A2-203ENST00000470404 ATXN8OSP0DMR3 200 aa9.06□□□□□ -0.96
PTP4A2-203ENST00000470404 CHRDL2Q6WN34 429 aa9.05□□□□□ -0.96
PTP4A2-203ENST00000470404 OSCARQ8IYS5 282 aa9.02□□□□□ -0.97
PTP4A2-203ENST00000470404 AKT1S1Q96B36 256 aa9.02□□□□□ -0.97
PTP4A2-203ENST00000470404 REM2Q8IYK8 340 aaPredicted RBP8.95□□□□□ -0.98
PTP4A2-203ENST00000470404 NISCHQ9Y2I1 1504 aa8.87□□□□□ -0.99
PTP4A2-203ENST00000470404 PITPNM1O00562 1244 aa8.86□□□□□ -0.99
PTP4A2-203ENST00000470404 MKRN4PQ13434 485 aaPredicted RBP8.86□□□□□ -0.99
PTP4A2-203ENST00000470404 PIP4P2Q8N4L2 257 aa8.86□□□□□ -0.99
PTP4A2-203ENST00000470404 FBLN2P98095 1184 aa8.84□□□□□ -0.99
PTP4A2-203ENST00000470404 SPDYE2BA6NHP3 402 aa8.82□□□□□ -1
PTP4A2-203ENST00000470404 SPDYE6P0CI01 402 aa8.82□□□□□ -1
PTP4A2-203ENST00000470404 SPDYE2Q495Y8 402 aa8.82□□□□□ -1
PTP4A2-203ENST00000470404 FXR2P51116 673 aaKnown RBP eCLIP8.81□□□□□ -1
PTP4A2-203ENST00000470404 CSRNP3Q8WYN3 585 aa8.78□□□□□ -1
PTP4A2-203ENST00000470404 SSUH2Q9Y2M2 353 aa8.74□□□□□ -1.01
PTP4A2-203ENST00000470404 SP7Q8TDD2 431 aaPredicted RBP8.73□□□□□ -1.01
PTP4A2-203ENST00000470404 ZNF692Q9BU19 519 aaPredicted RBP8.7□□□□□ -1.02
PTP4A2-203ENST00000470404 SPDYE1Q8NFV5 336 aaPredicted RBP8.66□□□□□ -1.02
PTP4A2-203ENST00000470404 HAX1O00165 279 aa8.65□□□□□ -1.02
PTP4A2-203ENST00000470404 EHMT2Q96KQ7 1210 aa8.64□□□□□ -1.03
PTP4A2-203ENST00000470404 CLEC11AQ9Y240 323 aa8.64□□□□□ -1.03
PTP4A2-203ENST00000470404 EVX2Q03828 476 aa8.63□□□□□ -1.03
PTP4A2-203ENST00000470404 PRKAR2AP13861 404 aaKnown RBP8.61□□□□□ -1.03
PTP4A2-203ENST00000470404 PABPN1Q86U42 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
PTP4A2-203ENST00000470404 C19orf67A6NJJ6 358 aa8.52□□□□□ -1.05
PTP4A2-203ENST00000470404 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
PTP4A2-203ENST00000470404 PRR29P0C7W0 189 aa8.51□□□□□ -1.05
PTP4A2-203ENST00000470404 GABBR2O75899 941 aa8.39□□□□□ -1.07
PTP4A2-203ENST00000470404 FARP1Q9Y4F1 1045 aaPredicted RBP8.39□□□□□ -1.07
PTP4A2-203ENST00000470404 SPDYE4A6NLX3 237 aa8.37□□□□□ -1.07
PTP4A2-203ENST00000470404 CREBZFQ9NS37 354 aa8.34□□□□□ -1.07
PTP4A2-203ENST00000470404 CD44P16070 742 aaKnown RBP8.32□□□□□ -1.08
PTP4A2-203ENST00000470404 STAG3Q9UJ98 1225 aa8.31□□□□□ -1.08
PTP4A2-203ENST00000470404 POTEIP0CG38 1075 aa8.26□□□□□ -1.09
PTP4A2-203ENST00000470404 PROM2Q8N271 834 aa8.23□□□□□ -1.09
PTP4A2-203ENST00000470404 ZNF579Q8NAF0 562 aaKnown RBP8.22□□□□□ -1.09
PTP4A2-203ENST00000470404 MNX1P50219 401 aaPredicted RBP8.21□□□□□ -1.1
PTP4A2-203ENST00000470404 ZRANB1Q9UGI0 708 aa8.21□□□□□ -1.1
PTP4A2-203ENST00000470404 CLCN6P51797 869 aa8.2□□□□□ -1.1
PTP4A2-203ENST00000470404 LHX8Q68G74 356 aa8.19□□□□□ -1.1
PTP4A2-203ENST00000470404 GALR2O43603 387 aaPredicted RBP8.13□□□□□ -1.11
PTP4A2-203ENST00000470404 NPM1P06748 294 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTP4A2-203ENST00000470404 DCBLD2Q96PD2 775 aa8.11□□□□□ -1.11
PTP4A2-203ENST00000470404 PHF12Q96QT6 1004 aa8.11□□□□□ -1.11
PTP4A2-203ENST00000470404 PAK3O75914 559 aaPredicted RBP8.07□□□□□ -1.12
PTP4A2-203ENST00000470404 PELP1Q8IZL8 1130 aaKnown RBP8.01□□□□□ -1.13
PTP4A2-203ENST00000470404 MS4A3Q96HJ5 214 aa8□□□□□ -1.13
PTP4A2-203ENST00000470404 POTEB2H3BUK9 544 aa7.99□□□□□ -1.13
PTP4A2-203ENST00000470404 TSPYL2Q9H2G4 693 aaPredicted RBP7.99□□□□□ -1.13
PTP4A2-203ENST00000470404 CCDC61Q9Y6R9 512 aa7.99□□□□□ -1.13
PTP4A2-203ENST00000470404 MIER1Q8N108 512 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms