RNA–Protein interactions for RNA: ENST00000470386.5

GTF3C3-210, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-210ENST00000470386 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
GTF3C3-210ENST00000470386 CHIC1Q5VXU3 224 aa18.84■□□□□ 0.61
GTF3C3-210ENST00000470386 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
GTF3C3-210ENST00000470386 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
GTF3C3-210ENST00000470386 FOXD1Q16676 465 aa15.93■□□□□ 0.14
GTF3C3-210ENST00000470386 MSH5O43196 834 aa15.06■□□□□ 0
GTF3C3-210ENST00000470386 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
GTF3C3-210ENST00000470386 PIAS4Q8N2W9 510 aaPredicted RBP14.92□□□□□ -0.02
GTF3C3-210ENST00000470386 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
GTF3C3-210ENST00000470386 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
GTF3C3-210ENST00000470386 ADRA2BP18089 450 aa14.72□□□□□ -0.05
GTF3C3-210ENST00000470386 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
GTF3C3-210ENST00000470386 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
GTF3C3-210ENST00000470386 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
GTF3C3-210ENST00000470386 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
GTF3C3-210ENST00000470386 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
GTF3C3-210ENST00000470386 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
GTF3C3-210ENST00000470386 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
GTF3C3-210ENST00000470386 CNKSR2Q8WXI2 1034 aa12.94□□□□□ -0.34
GTF3C3-210ENST00000470386 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
GTF3C3-210ENST00000470386 RNF39Q9H2S5 420 aa12.77□□□□□ -0.37
GTF3C3-210ENST00000470386 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
GTF3C3-210ENST00000470386 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
GTF3C3-210ENST00000470386 DNAJC5BQ9UF47 199 aa12.55□□□□□ -0.4
GTF3C3-210ENST00000470386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.421e-7■■■■□ 21.9
GTF3C3-210ENST00000470386 NPM3O75607 178 aaKnown RBP12.38□□□□□ -0.43
GTF3C3-210ENST00000470386 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
GTF3C3-210ENST00000470386 CAPN15O75808 1086 aa12.02□□□□□ -0.49
GTF3C3-210ENST00000470386 KCNA4P22459 653 aa11.99□□□□□ -0.49
GTF3C3-210ENST00000470386 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
GTF3C3-210ENST00000470386 DSG3P32926 999 aa11.91□□□□□ -0.5
GTF3C3-210ENST00000470386 APLP2Q06481 763 aa11.86□□□□□ -0.51
GTF3C3-210ENST00000470386 SLC4A2P04920 1241 aa11.82□□□□□ -0.52
GTF3C3-210ENST00000470386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.78□□□□□ -0.52
GTF3C3-210ENST00000470386 TRHP20396 242 aaPredicted RBP11.78□□□□□ -0.52
GTF3C3-210ENST00000470386 HNRNPUL2Q1KMD3 747 aaKnown RBP11.78□□□□□ -0.52
GTF3C3-210ENST00000470386 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
GTF3C3-210ENST00000470386 ABCB7O75027 752 aa11.69□□□□□ -0.54
GTF3C3-210ENST00000470386 POTEHQ6S545 545 aa11.68□□□□□ -0.54
GTF3C3-210ENST00000470386 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
GTF3C3-210ENST00000470386 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
GTF3C3-210ENST00000470386 RBM42Q9BTD8 480 aaKnown RBP11.46□□□□□ -0.57
GTF3C3-210ENST00000470386 POLA2Q14181 598 aa11.39□□□□□ -0.59
GTF3C3-210ENST00000470386 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
GTF3C3-210ENST00000470386 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
GTF3C3-210ENST00000470386 CHRDL2Q6WN34 429 aa11.22□□□□□ -0.61
GTF3C3-210ENST00000470386 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
GTF3C3-210ENST00000470386 ATF5Q9Y2D1 282 aaPredicted RBP11.15□□□□□ -0.62
GTF3C3-210ENST00000470386 AKT1S1Q96B36 256 aa11.12□□□□□ -0.63
GTF3C3-210ENST00000470386 OSCARQ8IYS5 282 aa11.03□□□□□ -0.64
GTF3C3-210ENST00000470386 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
GTF3C3-210ENST00000470386 ZBTB22O15209 634 aa10.96□□□□□ -0.65
GTF3C3-210ENST00000470386 ATXN8OSP0DMR3 200 aa10.94□□□□□ -0.66
GTF3C3-210ENST00000470386 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
GTF3C3-210ENST00000470386 SP7Q8TDD2 431 aaPredicted RBP10.88□□□□□ -0.67
GTF3C3-210ENST00000470386 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
GTF3C3-210ENST00000470386 FBLN2P98095 1184 aa10.87□□□□□ -0.67
GTF3C3-210ENST00000470386 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
GTF3C3-210ENST00000470386 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
GTF3C3-210ENST00000470386 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
GTF3C3-210ENST00000470386 HAX1O00165 279 aa10.8□□□□□ -0.68
GTF3C3-210ENST00000470386 FXR2P51116 673 aaKnown RBP eCLIP10.79□□□□□ -0.68
GTF3C3-210ENST00000470386 SPDYE1Q8NFV5 336 aaPredicted RBP10.69□□□□□ -0.7
GTF3C3-210ENST00000470386 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
GTF3C3-210ENST00000470386 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
GTF3C3-210ENST00000470386 MKRN4PQ13434 485 aaPredicted RBP10.64□□□□□ -0.71
GTF3C3-210ENST00000470386 PRKAR2AP13861 404 aaKnown RBP10.62□□□□□ -0.71
GTF3C3-210ENST00000470386 SSUH2Q9Y2M2 353 aa10.6□□□□□ -0.71
GTF3C3-210ENST00000470386 EVX2Q03828 476 aa10.54□□□□□ -0.72
GTF3C3-210ENST00000470386 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
GTF3C3-210ENST00000470386 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
GTF3C3-210ENST00000470386 C19orf67A6NJJ6 358 aa10.45□□□□□ -0.74
GTF3C3-210ENST00000470386 CHADLQ6NUI6 762 aa10.44□□□□□ -0.74
GTF3C3-210ENST00000470386 GABBR2O75899 941 aa10.35□□□□□ -0.75
GTF3C3-210ENST00000470386 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
GTF3C3-210ENST00000470386 CD44P16070 742 aaKnown RBP10.28□□□□□ -0.76
GTF3C3-210ENST00000470386 FARP1Q9Y4F1 1045 aaPredicted RBP10.28□□□□□ -0.76
GTF3C3-210ENST00000470386 LHX8Q68G74 356 aa10.21□□□□□ -0.77
GTF3C3-210ENST00000470386 STAG3Q9UJ98 1225 aa10.21□□□□□ -0.77
GTF3C3-210ENST00000470386 CLCN6P51797 869 aa10.2□□□□□ -0.78
GTF3C3-210ENST00000470386 EHMT2Q96KQ7 1210 aa10.19□□□□□ -0.78
GTF3C3-210ENST00000470386 SPDYE4A6NLX3 237 aa10.14□□□□□ -0.79
GTF3C3-210ENST00000470386 DCBLD2Q96PD2 775 aa10.12□□□□□ -0.79
GTF3C3-210ENST00000470386 ZRANB1Q9UGI0 708 aa10.12□□□□□ -0.79
GTF3C3-210ENST00000470386 CREBZFQ9NS37 354 aa10.1□□□□□ -0.79
GTF3C3-210ENST00000470386 ZNF579Q8NAF0 562 aaKnown RBP10.09□□□□□ -0.79
GTF3C3-210ENST00000470386 PAK3O75914 559 aaPredicted RBP10.07□□□□□ -0.8
GTF3C3-210ENST00000470386 POTEIP0CG38 1075 aa10.07□□□□□ -0.8
GTF3C3-210ENST00000470386 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
GTF3C3-210ENST00000470386 GALR2O43603 387 aaPredicted RBP9.96□□□□□ -0.82
GTF3C3-210ENST00000470386 PHF12Q96QT6 1004 aa9.92□□□□□ -0.82
GTF3C3-210ENST00000470386 MNX1P50219 401 aaPredicted RBP9.87□□□□□ -0.83
GTF3C3-210ENST00000470386 PLEKHG5O94827 1062 aa9.81□□□□□ -0.84
GTF3C3-210ENST00000470386 TSPYL2Q9H2G4 693 aaPredicted RBP9.8□□□□□ -0.84
GTF3C3-210ENST00000470386 MS4A3Q96HJ5 214 aa9.79□□□□□ -0.84
GTF3C3-210ENST00000470386 PROM2Q8N271 834 aa9.77□□□□□ -0.85
GTF3C3-210ENST00000470386 OTUD5Q96G74 571 aa9.77□□□□□ -0.85
GTF3C3-210ENST00000470386 POTEB2H3BUK9 544 aa9.74□□□□□ -0.85
GTF3C3-210ENST00000470386 ASTLQ6HA08 431 aaPredicted RBP9.74□□□□□ -0.85
GTF3C3-210ENST00000470386 PELP1Q8IZL8 1130 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 224.9 ms